Cow genome map

Conread name: rssp11_a9.y1

Conread position: 1-168
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 126, 20

Conread position: 1-171
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 65, 20

Conread position: 1-207
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 20

Conread position: 1-215
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 130, 22

Conread position: 1-215
Cow position:
Alignm length: 221
Alignm identity: 164
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 70, 113

Conread position: 1-216
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 134, 19

Conread position: 1-219
Cow position:
Alignm length: 221
Alignm identity: 171
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 187, 22

Conread position: 1-221
Cow position:
Alignm length: 223
Alignm identity: 152
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 171, 28

Conread position: 1-223
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 70, 22

Conread position: 1-224
Cow position:
Alignm length: 229
Alignm identity: 174
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 187, 9

Conread position: 1-224
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 70, 22

Conread position: 1-224
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 124, 20

Conread position: 1-230
Cow position:
Alignm length: 235
Alignm identity: 178
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 22, 86

Conread position: 1-243
Cow position:
Alignm length: 246
Alignm identity: 176
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 78, 25

Conread position: 1-243
Cow position:
Alignm length: 249
Alignm identity: 189
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 187, 20

Conread position: 1-243
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 187, 20

Conread position: 1-244
Cow position:
Alignm length: 253
Alignm identity: 188
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 72, 8

Conread position: 1-245
Cow position:
Alignm length: 253
Alignm identity: 188
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 133, 7

Conread position: 1-245
Cow position:
Alignm length: 255
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 1-245
Cow position:
Alignm length: 252
Alignm identity: 188
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 82, 20

Conread position: 1-245
Cow position:
Alignm length: 249
Alignm identity: 189
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 91, 8

Conread position: 1-245
Cow position:
Alignm length: 250
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 20

Conread position: 1-245
Cow position:
Alignm length: 250
Alignm identity: 192
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 187, 20

Conread position: 1-245
Cow position:
Alignm length: 247
Alignm identity: 184
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 218, 20

Conread position: 13-233
Cow position:
Alignm length: 230
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 107, 14

Conread position: 19-219
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 169, 57

Conread position: 20-244
Cow position:
Alignm length: 235
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 107, 57

Conread position: 22-245
Cow position:
Alignm length: 227
Alignm identity: 171
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 168, 0

Conread position: 24-181
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 21

Conread position: 24-183
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 24-211
Cow position:
Alignm length: 192
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 76

Conread position: 24-214
Cow position:
Alignm length: 195
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 120, 53

Conread position: 24-217
Cow position:
Alignm length: 197
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 191

Conread position: 24-217
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 50, 84

Conread position: 24-218
Cow position:
Alignm length: 196
Alignm identity: 144
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 94, 53

Conread position: 24-223
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 24-223
Cow position:
Alignm length: 206
Alignm identity: 161
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 49, 15

Conread position: 24-240
Cow position:
Alignm length: 222
Alignm identity: 169
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 50, 26

Conread position: 24-244
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 51, 129

Conread position: 24-245
Cow position:
Alignm length: 227
Alignm identity: 169
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 79, 53

Conread position: 24-245
Cow position:
Alignm length: 226
Alignm identity: 177
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 26, 76

Conread position: 24-245
Cow position:
Alignm length: 229
Alignm identity: 174
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 50, 98

Conread position: 24-246
Cow position:
Alignm length: 233
Alignm identity: 178
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 24-246
Cow position:
Alignm length: 230
Alignm identity: 179
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 103, 53

Conread position: 24-246
Cow position:
Alignm length: 240
Alignm identity: 188
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 50, 0

Conread position: 24-246
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 86

Conread position: 25-227
Cow position:
Alignm length: 211
Alignm identity: 166
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 25-245
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 75

Conread position: 26-160
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 84

Conread position: 26-182
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 26-184
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 26-194
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 51

Conread position: 26-195
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 74

Conread position: 26-197
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 26-197
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 26-208
Cow position:
Alignm length: 192
Alignm identity: 151
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 171

Conread position: 26-214
Cow position:
Alignm length: 196
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 94, 40

Conread position: 26-220
Cow position:
Alignm length: 199
Alignm identity: 154
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 101, 51

Conread position: 26-224
Cow position:
Alignm length: 204
Alignm identity: 157
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 162, 0

Conread position: 26-228
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 84

Conread position: 26-233
Cow position:
Alignm length: 214
Alignm identity: 163
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 94, 16

Conread position: 26-233
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 60, 0

Conread position: 26-234
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 161, 39

Conread position: 26-245
Cow position:
Alignm length: 223
Alignm identity: 170
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 162, 53

Conread position: 26-245
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 161, 51

Conread position: 26-245
Cow position:
Alignm length: 223
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 55

Conread position: 26-245
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 104, 60

Conread position: 26-245
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 99, 51

Conread position: 26-245
Cow position:
Alignm length: 227
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 55

Conread position: 26-245
Cow position:
Alignm length: 228
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 51

Conread position: 26-245
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 162, 44

Conread position: 26-245
Cow position:
Alignm length: 227
Alignm identity: 177
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 92, 41

Conread position: 26-245
Cow position:
Alignm length: 221
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 80

Conread position: 26-245
Cow position:
Alignm length: 227
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 26-245
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 94, 44

Conread position: 26-245
Cow position:
Alignm length: 224
Alignm identity: 173
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 162, 51

Conread position: 26-245
Cow position:
Alignm length: 231
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 26-246
Cow position:
Alignm length: 221
Alignm identity: 170
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 34, 0

Conread position: 27-181
Cow position:
Alignm length: 155
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 149, 0

Conread position: 27-184
Cow position:
Alignm length: 158
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 27-203
Cow position:
Alignm length: 188
Alignm identity: 143
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 52, 146

Conread position: 27-223
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 27-224
Cow position:
Alignm length: 201
Alignm identity: 150
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 161, 50

Conread position: 27-233
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 55, 157

Conread position: 27-239
Cow position:
Alignm length: 219
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 50

Conread position: 27-243
Cow position:
Alignm length: 221
Alignm identity: 169
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 144, 50

Conread position: 27-244
Cow position:
Alignm length: 221
Alignm identity: 173
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 161, 50

Conread position: 27-245
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 53

Conread position: 27-246
Cow position:
Alignm length: 224
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 67

Conread position: 27-246
Cow position:
Alignm length: 224
Alignm identity: 170
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 93, 41

Conread position: 30-137
Cow position:
Alignm length: 110
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 47

Conread position: 30-192
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 30-192
Cow position:
Alignm length: 167
Alignm identity: 132
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 87, 47

Conread position: 30-211
Cow position:
Alignm length: 185
Alignm identity: 143
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 158, 50

Conread position: 30-212
Cow position:
Alignm length: 188
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 107, 13

Conread position: 30-215
Cow position:
Alignm length: 193
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 100, 0

Conread position: 30-219
Cow position:
Alignm length: 193
Alignm identity: 153
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 158, 86

Conread position: 30-223
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 30-244
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 83, 76

Conread position: 31-219
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 19

Conread position: 31-223
Cow position:
Alignm length: 209
Alignm identity: 160
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 76, 49

Conread position: 31-223
Cow position:
Alignm length: 197
Alignm identity: 155
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 159, 46

Conread position: 31-223
Cow position:
Alignm length: 201
Alignm identity: 159
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 60, 46

Conread position: 31-233
Cow position:
Alignm length: 204
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 24, 49

Conread position: 31-244
Cow position:
Alignm length: 226
Alignm identity: 180
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 12, 166

Conread position: 31-245
Cow position:
Alignm length: 218
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 157, 22

Conread position: 31-246
Cow position:
Alignm length: 221
Alignm identity: 172
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 42, 70

Conread position: 31-246
Cow position:
Alignm length: 226
Alignm identity: 173
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 38, 48

Conread position: 31-246
Cow position:
Alignm length: 217
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 157

Conread position: 32-245
Cow position:
Alignm length: 218
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 101

Conread position: 33-161
Cow position:
Alignm length: 133
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 34-195
Cow position:
Alignm length: 167
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 34-213
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 106

Conread position: 34-224
Cow position:
Alignm length: 197
Alignm identity: 152
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 66

Conread position: 34-245
Cow position:
Alignm length: 219
Alignm identity: 166
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 40, 54

Conread position: 39-245
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 32, 0

Conread position: 41-245
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 146, 0

Conread position: 41-246
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 79, 65

Conread position: 47-245
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 53-243
Cow position:
Alignm length: 204
Alignm identity: 157
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 74, 27

Conread position: 54-246
Cow position:
Alignm length: 200
Alignm identity: 152
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 76, 177

Conread position: 57-207
Cow position:
Alignm length: 154
Alignm identity: 119
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 131, 22

Conread position: 58-245
Cow position:
Alignm length: 192
Alignm identity: 152
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 21, 0

Conread position: 60-245
Cow position:
Alignm length: 195
Alignm identity: 155
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 49, 0

Conread position: 71-192
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 78-245
Cow position:
Alignm length: 172
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 107

Show alignments to all cow chromosomes.