Cow genome map

Conread name: rssp11_a9.y1

Conread position: 1-159
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 20

Conread position: 1-162
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 8, 132

Conread position: 1-192
Cow position:
Alignm length: 193
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 20

Conread position: 1-212
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 198, 20

Conread position: 1-213
Cow position:
Alignm length: 220
Alignm identity: 159
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 128, 20

Conread position: 1-219
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 106

Conread position: 1-221
Cow position:
Alignm length: 227
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 129, 20

Conread position: 1-222
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 184, 20

Conread position: 1-222
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 72, 20

Conread position: 1-223
Cow position:
Alignm length: 228
Alignm identity: 178
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 20

Conread position: 1-223
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 187, 20

Conread position: 1-230
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 126, 20

Conread position: 1-236
Cow position:
Alignm length: 246
Alignm identity: 172
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 32, 114

Conread position: 1-244
Cow position:
Alignm length: 252
Alignm identity: 186
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 74, 22

Conread position: 1-244
Cow position:
Alignm length: 252
Alignm identity: 188
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 68, 22

Conread position: 1-245
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 187, 20

Conread position: 1-245
Cow position:
Alignm length: 254
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 73, 20

Conread position: 1-245
Cow position:
Alignm length: 253
Alignm identity: 192
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 70, 20

Conread position: 1-246
Cow position:
Alignm length: 248
Alignm identity: 183
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 182, 8

Conread position: 1-246
Cow position:
Alignm length: 248
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 22

Conread position: 1-246
Cow position:
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 19

Conread position: 1-246
Cow position:
Alignm length: 249
Alignm identity: 186
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 71, 20

Conread position: 2-241
Cow position:
Alignm length: 249
Alignm identity: 187
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 186, 18

Conread position: 10-246
Cow position:
Alignm length: 239
Alignm identity: 178
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 178, 21

Conread position: 14-215
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 174, 0

Conread position: 14-244
Cow position:
Alignm length: 242
Alignm identity: 177
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 60, 0

Conread position: 19-217
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 169, 51

Conread position: 22-146
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 22-186
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 22-189
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 22-192
Cow position:
Alignm length: 175
Alignm identity: 138
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 108, 0

Conread position: 23-246
Cow position:
Alignm length: 230
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 7

Conread position: 24-204
Cow position:
Alignm length: 190
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 50, 27

Conread position: 24-208
Cow position:
Alignm length: 195
Alignm identity: 149
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 24-238
Cow position:
Alignm length: 224
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 142, 15

Conread position: 24-244
Cow position:
Alignm length: 224
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 24-245
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 46, 66

Conread position: 24-245
Cow position:
Alignm length: 227
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 84

Conread position: 24-246
Cow position:
Alignm length: 232
Alignm identity: 177
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 50, 77

Conread position: 24-246
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 49, 214

Conread position: 24-246
Cow position:
Alignm length: 232
Alignm identity: 184
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 51, 24

Conread position: 24-246
Cow position:
Alignm length: 230
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 25-165
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 25, 79

Conread position: 25-246
Cow position:
Alignm length: 230
Alignm identity: 178
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 0

Conread position: 26-192
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 26-209
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 162, 51

Conread position: 26-210
Cow position:
Alignm length: 187
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 161, 80

Conread position: 26-211
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 26-213
Cow position:
Alignm length: 195
Alignm identity: 149
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 101, 49

Conread position: 26-216
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 92, 51

Conread position: 26-219
Cow position:
Alignm length: 200
Alignm identity: 151
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 101, 51

Conread position: 26-224
Cow position:
Alignm length: 202
Alignm identity: 156
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 162, 51

Conread position: 26-224
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 162, 10

Conread position: 26-233
Cow position:
Alignm length: 212
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 44

Conread position: 26-233
Cow position:
Alignm length: 210
Alignm identity: 159
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 164, 51

Conread position: 26-234
Cow position:
Alignm length: 215
Alignm identity: 164
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 45, 108

Conread position: 26-239
Cow position:
Alignm length: 217
Alignm identity: 171
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 162, 44

Conread position: 26-243
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 79, 53

Conread position: 26-243
Cow position:
Alignm length: 228
Alignm identity: 170
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 94, 51

Conread position: 26-245
Cow position:
Alignm length: 231
Alignm identity: 176
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 94, 53

Conread position: 26-245
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 51

Conread position: 26-245
Cow position:
Alignm length: 222
Alignm identity: 166
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 162, 51

Conread position: 26-245
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 26-245
Cow position:
Alignm length: 224
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 153, 94

Conread position: 26-245
Cow position:
Alignm length: 224
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 51

Conread position: 26-245
Cow position:
Alignm length: 224
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 94

Conread position: 26-245
Cow position:
Alignm length: 224
Alignm identity: 172
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 162, 75

Conread position: 26-246
Cow position:
Alignm length: 224
Alignm identity: 172
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 162, 40

Conread position: 26-246
Cow position:
Alignm length: 226
Alignm identity: 173
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 51, 183

Conread position: 26-246
Cow position:
Alignm length: 223
Alignm identity: 172
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 161, 66

Conread position: 27-184
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 27-197
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 82

Conread position: 27-210
Cow position:
Alignm length: 192
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 100, 0

Conread position: 27-211
Cow position:
Alignm length: 193
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 12

Conread position: 27-224
Cow position:
Alignm length: 206
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 63, 50

Conread position: 27-239
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 162

Conread position: 27-244
Cow position:
Alignm length: 223
Alignm identity: 166
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 91, 52

Conread position: 27-245
Cow position:
Alignm length: 226
Alignm identity: 175
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 104, 72

Conread position: 27-246
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 73

Conread position: 27-246
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 150, 0

Conread position: 29-245
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 38

Conread position: 30-175
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 97, 49

Conread position: 30-223
Cow position:
Alignm length: 194
Alignm identity: 147
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 7, 0

Conread position: 30-245
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 157, 48

Conread position: 30-245
Cow position:
Alignm length: 224
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 98, 47

Conread position: 30-245
Cow position:
Alignm length: 222
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 85, 58

Conread position: 30-246
Cow position:
Alignm length: 219
Alignm identity: 167
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 158, 192

Conread position: 31-206
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 112, 54

Conread position: 31-224
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 157, 20

Conread position: 31-240
Cow position:
Alignm length: 216
Alignm identity: 165
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 157, 48

Conread position: 31-244
Cow position:
Alignm length: 229
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 216

Conread position: 31-245
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 10, 0

Conread position: 31-245
Cow position:
Alignm length: 217
Alignm identity: 166
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 157, 48

Conread position: 31-245
Cow position:
Alignm length: 218
Alignm identity: 165
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 159, 89

Conread position: 31-245
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 69

Conread position: 31-246
Cow position:
Alignm length: 229
Alignm identity: 172
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 41, 158

Conread position: 33-209
Cow position:
Alignm length: 185
Alignm identity: 145
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 43, 98

Conread position: 34-245
Cow position:
Alignm length: 217
Alignm identity: 161
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 160, 45

Conread position: 35-219
Cow position:
Alignm length: 188
Alignm identity: 148
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 153, 12

Conread position: 36-214
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 91, 41

Conread position: 39-186
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 39-245
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 149, 50

Conread position: 39-246
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 124

Conread position: 40-246
Cow position:
Alignm length: 221
Alignm identity: 164
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 41-169
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 41-223
Cow position:
Alignm length: 192
Alignm identity: 151
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 33, 121

Conread position: 51-186
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 57-224
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 73, 156

Conread position: 58-233
Cow position:
Alignm length: 180
Alignm identity: 143
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 130, 51

Conread position: 78-245
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 110, 144

Show alignments to all cow chromosomes.