Cow genome map

Conread name: rssp11_a9.y1

Conread position: 1-161
Cow position: chr21:12461953-12462109 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 132, 20

Conread position: 1-168
Cow position: chr21:957689-957521 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 126, 8

Conread position: 1-178
Cow position: chr21:10633623-10633796 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 81, 20

Conread position: 1-192
Cow position: chr21:9872975-9872798 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 1-192
Cow position: chr21:32339720-32339906 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 1-192
Cow position: chr21:46973116-46973295 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 1-221
Cow position: chr21:23586897-23586675 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 177
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 126, 20

Conread position: 1-221
Cow position: chr21:25383031-25382808 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 121, 20

Conread position: 1-223
Cow position: chr21:30607072-30607288 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 106, 20

Conread position: 1-223
Cow position: chr21:34835412-34835626 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 80

Conread position: 1-223
Cow position: chr21:45330584-45330811 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 70, 23

Conread position: 1-224
Cow position: chr21:37361459-37361678 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 187, 20

Conread position: 1-226
Cow position: chr21:17434301-17434527 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 124, 20

Conread position: 1-233
Cow position: chr21:13303838-13303606 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 74, 24

Conread position: 1-233
Cow position: chr21:15584403-15584616 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 1-244
Cow position: chr21:10151815-10151571 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 25

Conread position: 1-244
Cow position: chr21:34390958-34391194 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 23

Conread position: 1-245
Cow position: chr21:4399820-4399575 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 188
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 70, 17

Conread position: 1-245
Cow position: chr21:7581885-7582130 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 117, 78

Conread position: 1-245
Cow position: chr21:13751407-13751163 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 163
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 105, 8

Conread position: 1-245
Cow position: chr21:33419706-33419940 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 191
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 78, 20

Conread position: 1-245
Cow position: chr21:41878488-41878251 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 187, 22

Conread position: 1-246
Cow position: chr21:27743764-27743515 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 192
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 76, 8

Conread position: 1-246
Cow position: chr21:32535992-32535750 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 22

Conread position: 1-246
Cow position: chr21:42913728-42913972 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 20

Conread position: 2-209
Cow position: chr21:47764099-47764301 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 186, 19

Conread position: 2-245
Cow position: chr21:13703669-13703912 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 107, 8

Conread position: 2-245
Cow position: chr21:17723032-17722799 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 181, 8

Conread position: 3-245
Cow position: chr21:25344891-25344653 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 185, 109

Conread position: 3-246
Cow position: chr21:39401609-39401374 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 9-222
Cow position: chr21:9028637-9028420 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 118, 18

Conread position: 11-245
Cow position: chr21:23478708-23478942 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 14

Conread position: 13-177
Cow position: chr21:24642528-24642364 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 58, 14

Conread position: 14-177
Cow position: chr21:10608444-10608609 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 14-211
Cow position: chr21:40065306-40065506 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 105

Conread position: 19-245
Cow position: chr21:42348671-42348903 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 51

Conread position: 21-243
Cow position: chr21:17475822-17475594 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 56

Conread position: 21-243
Cow position: chr21:17714318-17714090 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 56

Conread position: 21-245
Cow position: chr21:38900779-38900548 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 85, 56

Conread position: 21-246
Cow position: chr21:34738611-34738372 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 50, 0

Conread position: 22-209
Cow position: chr21:10001075-10000897 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 22-212
Cow position: chr21:17193753-17193952 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 22-246
Cow position: chr21:42190175-42190393 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 56, 79

Conread position: 22-246
Cow position: chr21:46264171-46263951 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 166, 13

Conread position: 24-184
Cow position: chr21:6765878-6765719 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 21

Conread position: 24-186
Cow position: chr21:41198406-41198574 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 24-192
Cow position: chr21:22194114-22194280 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 90

Conread position: 24-192
Cow position: chr21:27145991-27146161 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 24-207
Cow position: chr21:28027805-28027616 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 24-212
Cow position: chr21:45151621-45151815 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 24-215
Cow position: chr21:21077324-21077134 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 164, 53

Conread position: 24-217
Cow position: chr21:13850067-13850268 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 51, 141

Conread position: 24-219
Cow position: chr21:9311043-9310844 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 153, 82

Conread position: 24-224
Cow position: chr21:2927204-2927407 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 167

Conread position: 24-224
Cow position: chr21:8618275-8618070 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 51, 92

Conread position: 24-233
Cow position: chr21:25127600-25127395 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 17

Conread position: 24-237
Cow position: chr21:6764698-6764919 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 55, 134

Conread position: 24-241
Cow position: chr21:13048197-13048417 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 50, 39

Conread position: 24-243
Cow position: chr21:13727764-13727983 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 27

Conread position: 24-244
Cow position: chr21:46912538-46912320 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 69, 45

Conread position: 24-245
Cow position: chr21:4080357-4080129 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 178
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 50, 158

Conread position: 24-245
Cow position: chr21:5344656-5344436 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 47, 68

Conread position: 24-245
Cow position: chr21:30231693-30231925 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 55, 221

Conread position: 24-246
Cow position: chr21:4189834-4189608 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 24-246
Cow position: chr21:7716786-7717014 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 51, 214

Conread position: 24-246
Cow position: chr21:11706747-11706976 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 220

Conread position: 24-246
Cow position: chr21:20925508-20925732 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 24-246
Cow position: chr21:27863517-27863745 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 24-246
Cow position: chr21:36162962-36163189 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 24-246
Cow position: chr21:40899339-40899110 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 103, 0

Conread position: 24-246
Cow position: chr21:45866930-45866710 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 50, 63

Conread position: 25-238
Cow position: chr21:31676496-31676284 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 46, 117

Conread position: 25-245
Cow position: chr21:9416245-9416017 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 25-245
Cow position: chr21:13763618-13763400 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 0

Conread position: 25-246
Cow position: chr21:7564320-7564548 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 179
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 49, 152

Conread position: 26-160
Cow position: chr21:20152950-20152810 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 26-169
Cow position: chr21:10004891-10005032 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 51

Conread position: 26-184
Cow position: chr21:17175147-17174983 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 26-184
Cow position: chr21:28617585-28617429 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 53, 131

Conread position: 26-192
Cow position: chr21:13365334-13365175 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 26-202
Cow position: chr21:15911396-15911218 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 51

Conread position: 26-207
Cow position: chr21:4268872-4268686 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 26-208
Cow position: chr21:40589489-40589671 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 104, 38

Conread position: 26-213
Cow position: chr21:10118555-10118360 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 26-214
Cow position: chr21:31253540-31253341 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 118, 0

Conread position: 26-219
Cow position: chr21:3381087-3381280 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 58, 81

Conread position: 26-219
Cow position: chr21:32237291-32237098 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 156
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 151, 73

Conread position: 26-223
Cow position: chr21:24765286-24765081 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 60

Conread position: 26-223
Cow position: chr21:41579752-41579548 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 164

Conread position: 26-223
Cow position: chr21:45355832-45355633 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 161, 54

Conread position: 26-223
Cow position: chr21:48107866-48108070 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 14, 56

Conread position: 26-224
Cow position: chr21:30848952-30849143 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 162, 51

Conread position: 26-224
Cow position: chr21:41621120-41620915 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 104, 43

Conread position: 26-244
Cow position: chr21:3236518-3236308 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 162, 44

Conread position: 26-244
Cow position: chr21:16187812-16188020 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 26-244
Cow position: chr21:28512525-28512309 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 164, 51

Conread position: 26-245
Cow position: chr21:724890-725115 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 51

Conread position: 26-245
Cow position: chr21:5636722-5636946 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 99, 51

Conread position: 26-245
Cow position: chr21:23192518-23192743 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 94, 51

Conread position: 26-245
Cow position: chr21:29069333-29069553 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 162, 53

Conread position: 26-245
Cow position: chr21:38867576-38867791 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 121, 43

Conread position: 26-245
Cow position: chr21:41957180-41957399 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 161, 53

Conread position: 26-246
Cow position: chr21:18494965-18494749 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 94, 51

Conread position: 26-246
Cow position: chr21:43357262-43357487 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 178
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 47, 145

Conread position: 27-180
Cow position: chr21:18800534-18800686 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 27-215
Cow position: chr21:9998722-9998916 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 27-218
Cow position: chr21:17302382-17302574 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 56

Conread position: 27-233
Cow position: chr21:42384505-42384292 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 103, 0

Conread position: 27-242
Cow position: chr21:363645-363433 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 82, 52

Conread position: 27-245
Cow position: chr21:5482752-5482526 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 27-245
Cow position: chr21:5566995-5566766 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 44, 68

Conread position: 27-245
Cow position: chr21:6834045-6833827 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 47, 93

Conread position: 27-245
Cow position: chr21:28882130-28881924 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 170
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 161, 75

Conread position: 27-245
Cow position: chr21:41155858-41155637 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 93, 42

Conread position: 27-246
Cow position: chr21:395865-395652 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 170
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 161, 52

Conread position: 27-246
Cow position: chr21:28429438-28429224 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 159, 47

Conread position: 30-179
Cow position: chr21:31511278-31511137 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 50

Conread position: 30-192
Cow position: chr21:18845023-18845184 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 90, 50

Conread position: 30-197
Cow position: chr21:39450171-39450345 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 30-212
Cow position: chr21:45850720-45850902 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 158, 38

Conread position: 30-215
Cow position: chr21:23568213-23568013 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 30-223
Cow position: chr21:24598653-24598456 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 158, 49

Conread position: 30-224
Cow position: chr21:1059070-1058873 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 77, 0

Conread position: 30-244
Cow position: chr21:1464223-1464009 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 171

Conread position: 30-245
Cow position: chr21:47802265-47802487 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 47

Conread position: 30-246
Cow position: chr21:4998494-4998711 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 49

Conread position: 31-192
Cow position: chr21:17183914-17183753 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 40, 103

Conread position: 31-214
Cow position: chr21:31277813-31277627 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 138

Conread position: 31-230
Cow position: chr21:33563005-33562809 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 157, 132

Conread position: 31-242
Cow position: chr21:33997236-33997447 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 159, 46

Conread position: 31-243
Cow position: chr21:39403545-39403761 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 80, 0

Conread position: 31-245
Cow position: chr21:24858306-24858086 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 89, 48

Conread position: 31-246
Cow position: chr21:17511769-17511550 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 112, 68

Conread position: 32-222
Cow position: chr21:41597811-41597613 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 39, 0

Conread position: 33-184
Cow position: chr21:23310954-23311106 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 50

Conread position: 33-219
Cow position: chr21:33791377-33791567 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 38, 92

Conread position: 33-244
Cow position: chr21:24607380-24607161 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 35-234
Cow position: chr21:20044780-20044984 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 186

Conread position: 35-241
Cow position: chr21:26241815-26241602 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 35-242
Cow position: chr21:35897645-35897842 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 153, 42

Conread position: 35-244
Cow position: chr21:31159250-31159030 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 173
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 36, 0

Conread position: 35-246
Cow position: chr21:22718791-22719006 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 68, 201

Conread position: 39-213
Cow position: chr21:3763756-3763930 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 54

Conread position: 39-245
Cow position: chr21:18932471-18932267 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 51, 0

Conread position: 40-244
Cow position: chr21:14760556-14760360 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 148, 66

Conread position: 41-245
Cow position: chr21:938015-937827 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 42-245
Cow position: chr21:13954498-13954286 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 90

Conread position: 48-223
Cow position: chr21:34739819-34739646 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 48-225
Cow position: chr21:9334286-9334463 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 146
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 23, 74

Conread position: 51-245
Cow position: chr21:44671728-44671528 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 162
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 76, 30

Conread position: 53-204
Cow position: chr21:15611121-15610971 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 25

Conread position: 53-246
Cow position: chr21:47760751-47760551 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 160
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 58-223
Cow position: chr21:13256769-13256601 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 130, 21

Conread position: 63-223
Cow position: chr21:46132019-46132183 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 125, 8

Conread position: 66-245
Cow position: chr21:20548955-20549143 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 117, 13

Conread position: 71-223
Cow position: chr21:14464531-14464374 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 56, 41

Conread position: 71-245
Cow position: chr21:28919670-28919848 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 147
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 96

Conread position: 78-245
Cow position: chr21:37299414-37299240 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 84, 0

Show alignments to all cow chromosomes.