Cow genome map

Conread name: rssp11_a9.y1

Conread position: 1-192
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 68, 20

Conread position: 1-192
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 19

Conread position: 1-211
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 68, 8

Conread position: 1-218
Cow position:
Alignm length: 228
Alignm identity: 165
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 70, 20

Conread position: 1-218
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 187, 19

Conread position: 1-225
Cow position:
Alignm length: 227
Alignm identity: 172
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 186, 20

Conread position: 1-229
Cow position:
Alignm length: 237
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 111, 20

Conread position: 1-240
Cow position:
Alignm length: 243
Alignm identity: 183
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 187, 8

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 188
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 49, 20

Conread position: 1-245
Cow position:
Alignm length: 253
Alignm identity: 189
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 117, 20

Conread position: 1-245
Cow position:
Alignm length: 248
Alignm identity: 186
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 187, 20

Conread position: 1-245
Cow position:
Alignm length: 248
Alignm identity: 185
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 187, 20

Conread position: 1-245
Cow position:
Alignm length: 248
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 20

Conread position: 1-245
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 72, 121

Conread position: 1-245
Cow position:
Alignm length: 247
Alignm identity: 182
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 187, 20

Conread position: 1-246
Cow position:
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 1-246
Cow position:
Alignm length: 246
Alignm identity: 179
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 19, 0

Conread position: 1-246
Cow position:
Alignm length: 255
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 8

Conread position: 1-246
Cow position:
Alignm length: 252
Alignm identity: 191
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 70, 21

Conread position: 1-246
Cow position:
Alignm length: 254
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 2-246
Cow position:
Alignm length: 257
Alignm identity: 189
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 130, 19

Conread position: 5-246
Cow position:
Alignm length: 249
Alignm identity: 174
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 94, 0

Conread position: 20-241
Cow position:
Alignm length: 230
Alignm identity: 164
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 54, 83

Conread position: 24-148
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 24-152
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 24-185
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 24-212
Cow position:
Alignm length: 194
Alignm identity: 153
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 51, 0

Conread position: 24-223
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 164, 21

Conread position: 24-234
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 86

Conread position: 24-236
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 50, 26

Conread position: 24-236
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 50, 193

Conread position: 24-237
Cow position:
Alignm length: 218
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 88

Conread position: 24-244
Cow position:
Alignm length: 223
Alignm identity: 169
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 51, 209

Conread position: 24-244
Cow position:
Alignm length: 230
Alignm identity: 172
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 51, 0

Conread position: 24-244
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 51, 156

Conread position: 24-245
Cow position:
Alignm length: 227
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 90

Conread position: 24-245
Cow position:
Alignm length: 222
Alignm identity: 176
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 27, 0

Conread position: 24-245
Cow position:
Alignm length: 228
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 222

Conread position: 24-246
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 50, 11

Conread position: 24-246
Cow position:
Alignm length: 232
Alignm identity: 179
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 24-246
Cow position:
Alignm length: 232
Alignm identity: 178
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 50, 0

Conread position: 24-246
Cow position:
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 24-246
Cow position:
Alignm length: 229
Alignm identity: 173
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 51, 98

Conread position: 24-246
Cow position:
Alignm length: 236
Alignm identity: 184
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 101, 30

Conread position: 24-246
Cow position:
Alignm length: 232
Alignm identity: 168
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 50, 0

Conread position: 25-224
Cow position:
Alignm length: 204
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 140, 14

Conread position: 26-171
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 26-178
Cow position:
Alignm length: 155
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 26-206
Cow position:
Alignm length: 183
Alignm identity: 143
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 160, 0

Conread position: 26-209
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 164, 83

Conread position: 26-216
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 85, 51

Conread position: 26-220
Cow position:
Alignm length: 198
Alignm identity: 154
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 163, 83

Conread position: 26-224
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 109, 36

Conread position: 26-225
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 51, 0

Conread position: 26-226
Cow position:
Alignm length: 205
Alignm identity: 160
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 162, 51

Conread position: 26-233
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 104, 53

Conread position: 26-233
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 162, 54

Conread position: 26-237
Cow position:
Alignm length: 222
Alignm identity: 169
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 95

Conread position: 26-243
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 164, 22

Conread position: 26-243
Cow position:
Alignm length: 223
Alignm identity: 171
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 44, 98

Conread position: 26-245
Cow position:
Alignm length: 223
Alignm identity: 170
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 162, 185

Conread position: 26-245
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 104, 53

Conread position: 26-245
Cow position:
Alignm length: 227
Alignm identity: 172
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 101, 51

Conread position: 26-245
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 99, 0

Conread position: 26-245
Cow position:
Alignm length: 227
Alignm identity: 177
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 49, 77

Conread position: 26-245
Cow position:
Alignm length: 235
Alignm identity: 173
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 82, 51

Conread position: 26-245
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 91, 51

Conread position: 26-245
Cow position:
Alignm length: 227
Alignm identity: 170
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 101, 0

Conread position: 27-214
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 18

Conread position: 27-217
Cow position:
Alignm length: 195
Alignm identity: 134
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 161, 16

Conread position: 27-222
Cow position:
Alignm length: 198
Alignm identity: 151
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 159, 82

Conread position: 27-244
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 27

Conread position: 27-245
Cow position:
Alignm length: 222
Alignm identity: 171
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 108, 50

Conread position: 27-246
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 133

Conread position: 27-246
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 93, 40

Conread position: 30-190
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 30-197
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 41, 152

Conread position: 30-214
Cow position:
Alignm length: 193
Alignm identity: 147
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 30-221
Cow position:
Alignm length: 195
Alignm identity: 152
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 158, 0

Conread position: 30-232
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 158, 49

Conread position: 31-138
Cow position:
Alignm length: 111
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 31-186
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 31-202
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 153, 58

Conread position: 31-223
Cow position:
Alignm length: 196
Alignm identity: 148
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 157, 81

Conread position: 31-226
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 147, 84

Conread position: 31-245
Cow position:
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 31-246
Cow position:
Alignm length: 219
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 47, 79

Conread position: 31-246
Cow position:
Alignm length: 224
Alignm identity: 166
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 9, 67

Conread position: 32-219
Cow position:
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 66, 45

Conread position: 33-245
Cow position:
Alignm length: 217
Alignm identity: 168
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 155, 66

Conread position: 35-171
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 34

Conread position: 35-183
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 35-245
Cow position:
Alignm length: 213
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 142, 196

Conread position: 40-246
Cow position:
Alignm length: 210
Alignm identity: 167
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 148, 39

Conread position: 40-246
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 62, 37

Conread position: 41-211
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 147, 65

Conread position: 41-215
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 48-245
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 129, 72

Conread position: 51-237
Cow position:
Alignm length: 195
Alignm identity: 155
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 76, 29

Conread position: 53-245
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 143, 0

Conread position: 53-246
Cow position:
Alignm length: 203
Alignm identity: 164
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 22, 0

Conread position: 54-245
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 66, 25

Conread position: 54-246
Cow position:
Alignm length: 196
Alignm identity: 159
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 134, 27

Conread position: 57-240
Cow position:
Alignm length: 185
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 56

Conread position: 59-246
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 62-211
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 55

Show alignments to all cow chromosomes.