Cow genome map
Conread name: | rssp11_a9.y1 |
Conread position: | 1-136 |
Cow position: | chr25:15440825-15440958 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 104 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 73, 28 |
Conread position: | 1-191 |
Cow position: | chr25:6255985-6256172 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 148 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 78, 9 |
Conread position: | 1-212 |
Cow position: | chr25:16001573-16001779 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 163 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 187, 7 |
Conread position: | 1-215 |
Cow position: | chr25:35333110-35332912 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 162 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 155, 22 |
Conread position: | 1-222 |
Cow position: | chr25:18075625-18075401 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 174 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 74, 20 |
Conread position: | 1-223 |
Cow position: | chr25:20008085-20007871 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 171 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 182, 9 |
Conread position: | 1-236 |
Cow position: | chr25:22297067-22297296 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 171 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 186, 8 |
Conread position: | 1-241 |
Cow position: | chr25:6424636-6424872 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 183 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 126, 20 |
Conread position: | 1-244 |
Cow position: | chr25:9957088-9957324 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 192 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 187, 8 |
Conread position: | 1-245 |
Cow position: | chr25:12204421-12204179 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 20 |
Conread position: | 1-245 |
Cow position: | chr25:18564441-18564204 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 183 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 181, 20 |
Conread position: | 1-245 |
Cow position: | chr25:21245652-21245897 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 20 |
Conread position: | 1-245 |
Cow position: | chr25:25754045-25754286 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 184 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 105, 8 |
Conread position: | 1-245 |
Cow position: | chr25:26112219-26111991 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 171 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 1-245 |
Cow position: | chr25:26654861-26654616 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 190 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 116, 20 |
Conread position: | 1-245 |
Cow position: | chr25:36779448-36779205 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 176 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 130, 20 |
Conread position: | 3-245 |
Cow position: | chr25:14791703-14791465 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 190 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 127, 18 |
Conread position: | 9-220 |
Cow position: | chr25:26058534-26058319 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 151 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 135, 25 |
Conread position: | 14-223 |
Cow position: | chr25:24405793-24406009 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 150 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 37, 64 |
Conread position: | 14-246 |
Cow position: | chr25:18491018-18490780 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 182 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 14, 98 |
Conread position: | 20-192 |
Cow position: | chr25:21289283-21289105 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 140 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 22-245 |
Cow position: | chr25:19129787-19129575 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 159 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 24-192 |
Cow position: | chr25:24008242-24008412 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 132 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 24-217 |
Cow position: | chr25:17566520-17566324 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 154 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 50, 98 |
Conread position: | 24-244 |
Cow position: | chr25:16064822-16064607 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 171 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 164, 81 |
Conread position: | 24-245 |
Cow position: | chr25:17658540-17658324 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 23 |
Conread position: | 24-245 |
Cow position: | chr25:33959321-33959551 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 176 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 33, 141 |
Conread position: | 24-246 |
Cow position: | chr25:6464099-6464321 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 179 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 80 |
Conread position: | 24-246 |
Cow position: | chr25:18294382-18294606 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 179 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 98 |
Conread position: | 24-246 |
Cow position: | chr25:20060094-20060320 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 181 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 44, 157 |
Conread position: | 25-219 |
Cow position: | chr25:6886041-6886242 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 147 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 25-246 |
Cow position: | chr25:6474165-6474392 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 175 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 102, 43 |
Conread position: | 25-246 |
Cow position: | chr25:27622020-27621790 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 171 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 45, 149 |
Conread position: | 26-152 |
Cow position: | chr25:12755560-12755686 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 101 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 45, 107 |
Conread position: | 26-184 |
Cow position: | chr25:10218117-10218278 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 126 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 26-186 |
Cow position: | chr25:36033368-36033207 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 124 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 101, 51 |
Conread position: | 26-207 |
Cow position: | chr25:4002731-4002543 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 136 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 26-212 |
Cow position: | chr25:7581494-7581685 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 149 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 101, 53 |
Conread position: | 26-212 |
Cow position: | chr25:16400332-16400507 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 147 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 162, 25 |
Conread position: | 26-219 |
Cow position: | chr25:28188016-28188215 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 154 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 26-223 |
Cow position: | chr25:11131511-11131316 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 139 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 26-223 |
Cow position: | chr25:20785655-20785852 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 148 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 29, 19 |
Conread position: | 26-223 |
Cow position: | chr25:24167971-24168167 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 145 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 94, 51 |
Conread position: | 26-224 |
Cow position: | chr25:22203754-22203960 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 157 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 26-227 |
Cow position: | chr25:14513041-14512843 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 149 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 162, 51 |
Conread position: | 26-233 |
Cow position: | chr25:1838168-1837961 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 167 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 162, 94 |
Conread position: | 26-237 |
Cow position: | chr25:14224873-14225078 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 163 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 162, 16 |
Conread position: | 26-240 |
Cow position: | chr25:8347439-8347223 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 179 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 77 |
Conread position: | 26-244 |
Cow position: | chr25:3145775-3145556 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 161 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 94, 139 |
Conread position: | 26-244 |
Cow position: | chr25:10365820-10366042 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 172 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 100, 186 |
Conread position: | 26-244 |
Cow position: | chr25:21894956-21895177 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 195, 42 |
Conread position: | 26-244 |
Cow position: | chr25:27868733-27868520 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 156 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 26-244 |
Cow position: | chr25:31732803-31733026 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 173 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 72, 44 |
Conread position: | 26-245 |
Cow position: | chr25:1735383-1735601 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 178 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 101, 44 |
Conread position: | 26-245 |
Cow position: | chr25:7216760-7216537 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 13 |
Conread position: | 26-245 |
Cow position: | chr25:8120711-8120486 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 169 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 26-245 |
Cow position: | chr25:26087451-26087224 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 27-208 |
Cow position: | chr25:36026938-36026753 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 138 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 27-224 |
Cow position: | chr25:21266939-21266736 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 149 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 132, 40 |
Conread position: | 27-244 |
Cow position: | chr25:16921862-16922082 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 177 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 98, 21 |
Conread position: | 27-245 |
Cow position: | chr25:12239218-12239428 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 163 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 28, 50 |
Conread position: | 27-245 |
Cow position: | chr25:33839309-33839097 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 169 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 44, 69 |
Conread position: | 27-246 |
Cow position: | chr25:2046629-2046843 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 156 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 160, 78 |
Conread position: | 30-245 |
Cow position: | chr25:12097768-12097552 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 165 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 90, 46 |
Conread position: | 30-245 |
Cow position: | chr25:13569244-13569458 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 170 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 41, 69 |
Conread position: | 31-192 |
Cow position: | chr25:61586-61423 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 128 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 43, 159 |
Conread position: | 31-245 |
Cow position: | chr25:12234834-12235047 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 149 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 163, 31 |
Conread position: | 31-245 |
Cow position: | chr25:36762032-36761815 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 173 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 14 |
Conread position: | 31-246 |
Cow position: | chr25:35340256-35340043 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 160 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 156, 47 |
Conread position: | 33-192 |
Cow position: | chr25:11666578-11666421 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 125 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 41, 81 |
Conread position: | 34-221 |
Cow position: | chr25:35612381-35612568 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 148 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 143, 43 |
Conread position: | 34-246 |
Cow position: | chr25:2110999-2110791 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 169 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 154, 43 |
Conread position: | 35-245 |
Cow position: | chr25:10407492-10407709 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 154 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 35-246 |
Cow position: | chr25:448423-448637 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 151 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 39-215 |
Cow position: | chr25:40407553-40407730 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 133 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 31, 91 |
Conread position: | 39-244 |
Cow position: | chr25:17354294-17354089 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 156 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 149, 69 |
Conread position: | 41-165 |
Cow position: | chr25:26270018-26270142 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 95 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 41-192 |
Cow position: | chr25:20020077-20020222 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 41-245 |
Cow position: | chr25:10138012-10137816 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 165 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 147, 36 |
Conread position: | 51-215 |
Cow position: | chr25:24452262-24452429 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 135 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 102, 127 |
Conread position: | 55-245 |
Cow position: | chr25:41387616-41387800 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 142 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 56-245 |
Cow position: | chr25:11956730-11956536 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 139 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 59-245 |
Cow position: | chr25:1096476-1096286 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 148 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 71-245 |
Cow position: | chr25:18262537-18262716 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 129 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 49, 150 |
Conread position: | 86-245 |
Cow position: | chr25:14117980-14117818 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 128 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 102, 0 |
Show alignments to all cow chromosomes.