Cow genome map

Conread name: rssp11_a9.y1

Conread position: 1-158
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 51, 20

Conread position: 1-187
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 77

Conread position: 1-194
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 45

Conread position: 1-213
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 186, 20

Conread position: 1-218
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 126, 20

Conread position: 1-219
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 187, 8

Conread position: 1-242
Cow position:
Alignm length: 251
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 8

Conread position: 1-243
Cow position:
Alignm length: 250
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 126, 20

Conread position: 1-245
Cow position:
Alignm length: 252
Alignm identity: 188
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 126, 20

Conread position: 14-244
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 174, 92

Conread position: 14-245
Cow position:
Alignm length: 239
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 106, 25

Conread position: 19-233
Cow position:
Alignm length: 217
Alignm identity: 161
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 169, 60

Conread position: 21-246
Cow position:
Alignm length: 231
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 22-245
Cow position:
Alignm length: 233
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 55

Conread position: 22-246
Cow position:
Alignm length: 234
Alignm identity: 180
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 52, 0

Conread position: 24-171
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 50, 87

Conread position: 24-184
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 24-197
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 76

Conread position: 24-206
Cow position:
Alignm length: 184
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 113, 29

Conread position: 24-211
Cow position:
Alignm length: 192
Alignm identity: 153
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 59, 53

Conread position: 24-237
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 51, 19

Conread position: 24-245
Cow position:
Alignm length: 229
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 24-245
Cow position:
Alignm length: 227
Alignm identity: 174
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 114, 53

Conread position: 24-246
Cow position:
Alignm length: 226
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 47

Conread position: 24-246
Cow position:
Alignm length: 238
Alignm identity: 179
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 50, 26

Conread position: 24-246
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 50, 15

Conread position: 25-233
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 163, 14

Conread position: 26-154
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 96, 108

Conread position: 26-157
Cow position:
Alignm length: 132
Alignm identity: 99
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 26-192
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 26-196
Cow position:
Alignm length: 177
Alignm identity: 138
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 45, 110

Conread position: 26-207
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 26-208
Cow position:
Alignm length: 188
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 54

Conread position: 26-223
Cow position:
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 26-224
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 45, 81

Conread position: 26-233
Cow position:
Alignm length: 213
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 94

Conread position: 26-236
Cow position:
Alignm length: 214
Alignm identity: 157
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 162, 59

Conread position: 26-243
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 45, 60

Conread position: 26-244
Cow position:
Alignm length: 222
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 153, 0

Conread position: 26-244
Cow position:
Alignm length: 224
Alignm identity: 171
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 58, 51

Conread position: 26-245
Cow position:
Alignm length: 228
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 77, 59

Conread position: 26-245
Cow position:
Alignm length: 223
Alignm identity: 170
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 162, 51

Conread position: 26-245
Cow position:
Alignm length: 228
Alignm identity: 175
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 49, 90

Conread position: 26-245
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 26-246
Cow position:
Alignm length: 229
Alignm identity: 176
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 96, 43

Conread position: 27-164
Cow position:
Alignm length: 142
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 27-184
Cow position:
Alignm length: 162
Alignm identity: 127
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 98, 42

Conread position: 27-203
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 65

Conread position: 27-212
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 79, 0

Conread position: 27-212
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 112

Conread position: 27-212
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 108

Conread position: 27-235
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 98

Conread position: 27-242
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 44, 0

Conread position: 27-245
Cow position:
Alignm length: 224
Alignm identity: 169
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 93, 43

Conread position: 27-245
Cow position:
Alignm length: 226
Alignm identity: 173
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 44, 0

Conread position: 27-246
Cow position:
Alignm length: 225
Alignm identity: 170
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 40, 51

Conread position: 27-246
Cow position:
Alignm length: 223
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 77

Conread position: 27-246
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 93, 207

Conread position: 29-246
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 157, 22

Conread position: 31-193
Cow position:
Alignm length: 165
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 43, 127

Conread position: 31-193
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 31-237
Cow position:
Alignm length: 210
Alignm identity: 162
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 157, 46

Conread position: 31-246
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 161, 78

Conread position: 31-246
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 0

Conread position: 31-246
Cow position:
Alignm length: 224
Alignm identity: 170
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 135, 75

Conread position: 34-212
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 14

Conread position: 34-245
Cow position:
Alignm length: 218
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 35-215
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 113, 42

Conread position: 35-224
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 35-246
Cow position:
Alignm length: 218
Alignm identity: 171
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 41, 13

Conread position: 35-246
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 36-196
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 33, 89

Conread position: 40-245
Cow position:
Alignm length: 209
Alignm identity: 158
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 146, 128

Conread position: 41-224
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 144, 0

Conread position: 41-243
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 88, 188

Conread position: 48-245
Cow position:
Alignm length: 202
Alignm identity: 136
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 51-239
Cow position:
Alignm length: 193
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 54-230
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 24, 160

Show alignments to all cow chromosomes.