Cow genome map

Conread name: rssp11_a9.y1

Conread position: 1-163
Cow position:
Alignm length: 163
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 1-184
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 73, 8

Conread position: 1-184
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 1-192
Cow position:
Alignm length: 197
Alignm identity: 151
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 54, 22

Conread position: 1-202
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 187, 7

Conread position: 1-212
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 124, 19

Conread position: 1-215
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 119, 23

Conread position: 1-217
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 130, 20

Conread position: 1-217
Cow position:
Alignm length: 231
Alignm identity: 168
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 73, 20

Conread position: 1-224
Cow position:
Alignm length: 239
Alignm identity: 175
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 71, 6

Conread position: 1-238
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 70, 22

Conread position: 1-242
Cow position:
Alignm length: 251
Alignm identity: 189
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 73, 8

Conread position: 1-242
Cow position:
Alignm length: 246
Alignm identity: 186
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 124, 19

Conread position: 1-243
Cow position:
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 20

Conread position: 1-244
Cow position:
Alignm length: 249
Alignm identity: 188
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 187, 22

Conread position: 1-245
Cow position:
Alignm length: 252
Alignm identity: 188
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 70, 20

Conread position: 1-245
Cow position:
Alignm length: 251
Alignm identity: 179
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 140, 182

Conread position: 1-246
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 36, 19

Conread position: 1-246
Cow position:
Alignm length: 252
Alignm identity: 193
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 126, 20

Conread position: 1-246
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 179, 22

Conread position: 2-175
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 76, 19

Conread position: 2-246
Cow position:
Alignm length: 259
Alignm identity: 193
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 70, 21

Conread position: 3-245
Cow position:
Alignm length: 252
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 30

Conread position: 3-245
Cow position:
Alignm length: 251
Alignm identity: 176
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 105, 21

Conread position: 3-246
Cow position:
Alignm length: 250
Alignm identity: 184
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 106, 18

Conread position: 5-246
Cow position:
Alignm length: 247
Alignm identity: 176
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 120, 0

Conread position: 8-245
Cow position:
Alignm length: 242
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 15

Conread position: 11-237
Cow position:
Alignm length: 228
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 16

Conread position: 13-214
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 60, 14

Conread position: 13-245
Cow position:
Alignm length: 237
Alignm identity: 177
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 72, 78

Conread position: 15-235
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 7, 63

Conread position: 19-245
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 43

Conread position: 20-245
Cow position:
Alignm length: 230
Alignm identity: 176
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 87, 65

Conread position: 21-154
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 84, 48

Conread position: 22-224
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 110, 32

Conread position: 22-245
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 134, 7

Conread position: 24-138
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 92

Conread position: 24-164
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 24-210
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 24-224
Cow position:
Alignm length: 201
Alignm identity: 159
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 82, 0

Conread position: 24-224
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 24-237
Cow position:
Alignm length: 224
Alignm identity: 171
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 49, 201

Conread position: 24-243
Cow position:
Alignm length: 223
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 192

Conread position: 24-246
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 164, 74

Conread position: 24-246
Cow position:
Alignm length: 237
Alignm identity: 184
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 96, 0

Conread position: 24-246
Cow position:
Alignm length: 233
Alignm identity: 178
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 165

Conread position: 24-246
Cow position:
Alignm length: 228
Alignm identity: 177
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 108, 45

Conread position: 24-246
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 164, 56

Conread position: 24-246
Cow position:
Alignm length: 227
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 15

Conread position: 25-213
Cow position:
Alignm length: 193
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 95, 52

Conread position: 25-246
Cow position:
Alignm length: 229
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 25-246
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 163, 104

Conread position: 25-246
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 159, 54

Conread position: 26-186
Cow position:
Alignm length: 166
Alignm identity: 134
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 48, 20

Conread position: 26-202
Cow position:
Alignm length: 179
Alignm identity: 140
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 157, 51

Conread position: 26-214
Cow position:
Alignm length: 194
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 112, 45

Conread position: 26-218
Cow position:
Alignm length: 200
Alignm identity: 154
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 162, 51

Conread position: 26-219
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 26-222
Cow position:
Alignm length: 204
Alignm identity: 152
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 105, 22

Conread position: 26-223
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 104, 22

Conread position: 26-223
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 162, 51

Conread position: 26-223
Cow position:
Alignm length: 201
Alignm identity: 150
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 162, 51

Conread position: 26-224
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 101, 53

Conread position: 26-243
Cow position:
Alignm length: 222
Alignm identity: 164
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 105, 51

Conread position: 26-245
Cow position:
Alignm length: 223
Alignm identity: 172
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 162, 53

Conread position: 26-246
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 109, 53

Conread position: 26-246
Cow position:
Alignm length: 224
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 153, 44

Conread position: 27-175
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 19

Conread position: 27-210
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 80

Conread position: 27-212
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 55

Conread position: 27-216
Cow position:
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 27-220
Cow position:
Alignm length: 199
Alignm identity: 157
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 47, 119

Conread position: 27-228
Cow position:
Alignm length: 209
Alignm identity: 163
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 93, 72

Conread position: 27-236
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 100, 50

Conread position: 27-242
Cow position:
Alignm length: 232
Alignm identity: 181
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 42, 202

Conread position: 27-243
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 17, 68

Conread position: 27-244
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 100, 30

Conread position: 27-245
Cow position:
Alignm length: 221
Alignm identity: 170
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 161, 96

Conread position: 27-245
Cow position:
Alignm length: 226
Alignm identity: 155
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 35, 27

Conread position: 27-245
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 91, 205

Conread position: 27-246
Cow position:
Alignm length: 223
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 161, 55

Conread position: 29-246
Cow position:
Alignm length: 230
Alignm identity: 174
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 42, 72

Conread position: 30-189
Cow position:
Alignm length: 166
Alignm identity: 128
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 49, 83

Conread position: 30-196
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 102, 40

Conread position: 30-224
Cow position:
Alignm length: 197
Alignm identity: 150
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 158, 39

Conread position: 30-242
Cow position:
Alignm length: 222
Alignm identity: 171
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 33, 0

Conread position: 30-245
Cow position:
Alignm length: 231
Alignm identity: 171
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 156, 82

Conread position: 30-245
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 88, 47

Conread position: 30-246
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 49, 103

Conread position: 31-213
Cow position:
Alignm length: 186
Alignm identity: 146
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 45, 37

Conread position: 31-219
Cow position:
Alignm length: 192
Alignm identity: 148
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 157, 46

Conread position: 31-245
Cow position:
Alignm length: 218
Alignm identity: 169
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 157, 46

Conread position: 31-246
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 155, 54

Conread position: 33-246
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 93

Conread position: 34-245
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 154, 0

Conread position: 35-217
Cow position:
Alignm length: 191
Alignm identity: 148
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 7, 45

Conread position: 36-214
Cow position:
Alignm length: 182
Alignm identity: 142
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 150, 41

Conread position: 37-245
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 83, 42

Conread position: 38-246
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 60, 71

Conread position: 39-236
Cow position:
Alignm length: 205
Alignm identity: 140
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 149, 39

Conread position: 41-214
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 41-216
Cow position:
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 147, 38

Conread position: 41-233
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 79, 38

Conread position: 41-233
Cow position:
Alignm length: 195
Alignm identity: 149
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 147, 57

Conread position: 41-246
Cow position:
Alignm length: 209
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 147, 65

Conread position: 50-245
Cow position:
Alignm length: 199
Alignm identity: 160
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 5, 30

Conread position: 51-233
Cow position:
Alignm length: 195
Alignm identity: 153
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 53-246
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 134, 45

Conread position: 54-243
Cow position:
Alignm length: 193
Alignm identity: 151
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 134, 25

Conread position: 54-245
Cow position:
Alignm length: 197
Alignm identity: 153
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 97, 14

Conread position: 54-245
Cow position:
Alignm length: 192
Alignm identity: 150
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 45, 0

Conread position: 54-246
Cow position:
Alignm length: 200
Alignm identity: 158
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 71, 0

Conread position: 56-242
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 10

Conread position: 57-245
Cow position:
Alignm length: 195
Alignm identity: 158
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 74, 22

Conread position: 57-246
Cow position:
Alignm length: 192
Alignm identity: 154
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 131, 63

Conread position: 58-246
Cow position:
Alignm length: 195
Alignm identity: 156
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 17, 76

Conread position: 72-206
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 95

Conread position: 73-245
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 106, 162

Show alignments to all cow chromosomes.