Cow genome map

Conread name: rssp11_a9.y1

Conread position: 1-157
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 74, 8

Conread position: 1-165
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 21

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 1-171
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 126, 8

Conread position: 1-191
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 73, 7

Conread position: 1-192
Cow position:
Alignm length: 192
Alignm identity: 154
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 20, 0

Conread position: 1-195
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 87, 20

Conread position: 1-211
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 68, 22

Conread position: 1-215
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 1-219
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 125, 20

Conread position: 1-219
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 187, 20

Conread position: 1-224
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 93, 20

Conread position: 1-230
Cow position:
Alignm length: 234
Alignm identity: 176
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 125, 20

Conread position: 1-245
Cow position:
Alignm length: 254
Alignm identity: 190
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 75, 20

Conread position: 1-245
Cow position:
Alignm length: 248
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 21

Conread position: 1-245
Cow position:
Alignm length: 245
Alignm identity: 180
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 1-245
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 126, 19

Conread position: 1-245
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 70, 20

Conread position: 1-245
Cow position:
Alignm length: 250
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 22

Conread position: 1-246
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 82, 20

Conread position: 2-245
Cow position:
Alignm length: 247
Alignm identity: 184
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 186, 52

Conread position: 4-219
Cow position:
Alignm length: 222
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 75, 16

Conread position: 13-194
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 114, 14

Conread position: 13-197
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 61, 14

Conread position: 14-246
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 97, 89

Conread position: 20-244
Cow position:
Alignm length: 227
Alignm identity: 175
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 53, 102

Conread position: 21-245
Cow position:
Alignm length: 229
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 87

Conread position: 21-246
Cow position:
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 22-243
Cow position:
Alignm length: 230
Alignm identity: 174
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 63, 8

Conread position: 24-173
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 24-178
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 24-180
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 103, 19

Conread position: 24-186
Cow position:
Alignm length: 166
Alignm identity: 128
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 53, 78

Conread position: 24-192
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 50, 155

Conread position: 24-215
Cow position:
Alignm length: 197
Alignm identity: 151
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 50, 124

Conread position: 24-219
Cow position:
Alignm length: 205
Alignm identity: 158
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 55, 152

Conread position: 24-234
Cow position:
Alignm length: 214
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 163, 44

Conread position: 24-237
Cow position:
Alignm length: 220
Alignm identity: 169
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 56, 0

Conread position: 24-243
Cow position:
Alignm length: 226
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 53

Conread position: 24-244
Cow position:
Alignm length: 230
Alignm identity: 176
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 30

Conread position: 24-245
Cow position:
Alignm length: 227
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 152

Conread position: 24-245
Cow position:
Alignm length: 229
Alignm identity: 175
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 96, 139

Conread position: 24-245
Cow position:
Alignm length: 242
Alignm identity: 178
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 47, 222

Conread position: 24-246
Cow position:
Alignm length: 231
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 89

Conread position: 24-246
Cow position:
Alignm length: 228
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 51, 202

Conread position: 26-146
Cow position:
Alignm length: 121
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 26-190
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 26-192
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 94, 53

Conread position: 26-195
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 44

Conread position: 26-196
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 26-207
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 160, 28

Conread position: 26-213
Cow position:
Alignm length: 194
Alignm identity: 148
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 94, 0

Conread position: 26-218
Cow position:
Alignm length: 203
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 60

Conread position: 26-218
Cow position:
Alignm length: 201
Alignm identity: 157
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 45, 0

Conread position: 26-219
Cow position:
Alignm length: 200
Alignm identity: 155
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 45, 86

Conread position: 26-223
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 162, 51

Conread position: 26-223
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 85, 63

Conread position: 26-224
Cow position:
Alignm length: 202
Alignm identity: 156
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 26-224
Cow position:
Alignm length: 209
Alignm identity: 163
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 56, 0

Conread position: 26-226
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 24, 54

Conread position: 26-243
Cow position:
Alignm length: 222
Alignm identity: 172
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 45, 87

Conread position: 26-243
Cow position:
Alignm length: 223
Alignm identity: 169
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 45, 126

Conread position: 26-245
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 51, 0

Conread position: 26-245
Cow position:
Alignm length: 234
Alignm identity: 178
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 45, 151

Conread position: 26-246
Cow position:
Alignm length: 227
Alignm identity: 176
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 105, 53

Conread position: 26-246
Cow position:
Alignm length: 227
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 26-246
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 83, 0

Conread position: 27-191
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 27-202
Cow position:
Alignm length: 181
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 27-212
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 55

Conread position: 27-222
Cow position:
Alignm length: 203
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 75

Conread position: 27-223
Cow position:
Alignm length: 202
Alignm identity: 156
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 22, 18

Conread position: 27-244
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 78, 126

Conread position: 27-246
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 158, 103

Conread position: 27-246
Cow position:
Alignm length: 222
Alignm identity: 166
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 161, 148

Conread position: 29-180
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 30-154
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 72

Conread position: 30-186
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 30-203
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 30-211
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 30-214
Cow position:
Alignm length: 193
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 9

Conread position: 30-223
Cow position:
Alignm length: 197
Alignm identity: 157
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 159, 24

Conread position: 30-238
Cow position:
Alignm length: 211
Alignm identity: 161
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 181, 47

Conread position: 30-245
Cow position:
Alignm length: 224
Alignm identity: 171
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 44, 0

Conread position: 30-246
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 28

Conread position: 30-246
Cow position:
Alignm length: 227
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 154

Conread position: 31-215
Cow position:
Alignm length: 187
Alignm identity: 148
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 157, 68

Conread position: 31-217
Cow position:
Alignm length: 189
Alignm identity: 148
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 157, 62

Conread position: 31-223
Cow position:
Alignm length: 199
Alignm identity: 157
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 43, 86

Conread position: 31-223
Cow position:
Alignm length: 196
Alignm identity: 135
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 149, 17

Conread position: 31-223
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 105, 75

Conread position: 31-224
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 149, 46

Conread position: 31-224
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 67, 46

Conread position: 31-246
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 40, 0

Conread position: 31-246
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 157, 46

Conread position: 33-158
Cow position:
Alignm length: 126
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 33-190
Cow position:
Alignm length: 159
Alignm identity: 127
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 95

Conread position: 33-246
Cow position:
Alignm length: 221
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 34-245
Cow position:
Alignm length: 217
Alignm identity: 169
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 105, 45

Conread position: 35-194
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 35-245
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 31

Conread position: 35-245
Cow position:
Alignm length: 219
Alignm identity: 167
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 85, 42

Conread position: 35-246
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 132, 152

Conread position: 36-236
Cow position:
Alignm length: 203
Alignm identity: 152
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 152, 164

Conread position: 36-239
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 87, 70

Conread position: 36-245
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 152, 49

Conread position: 39-245
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 26

Conread position: 40-246
Cow position:
Alignm length: 211
Alignm identity: 161
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 148, 0

Conread position: 41-178
Cow position:
Alignm length: 139
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 42-245
Cow position:
Alignm length: 211
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 54-246
Cow position:
Alignm length: 195
Alignm identity: 152
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 129, 25

Conread position: 62-215
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 17

Conread position: 69-244
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 58, 12

Conread position: 70-245
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 36

Conread position: 71-233
Cow position:
Alignm length: 169
Alignm identity: 134
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 58, 97

Conread position: 77-195
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 78-245
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 19

Show alignments to all cow chromosomes.