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Cow genome map

           
Conread name:
           
rssp11_a9.y1
        

               
Conread position:
               
1-129
               

               
Cow position:
               
chr4:38887186-38887314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr4:16091453-16091632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr4:43749862-43750044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
128, 20
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr4:656868-657058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr4:13256034-13255849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr4:43909689-43909490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
187, 20
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr4:31004461-31004667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
187, 25
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr4:19316056-19316261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr4:46597324-46597118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
78, 22
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:43495848-43495634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr4:54930474-54930690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr4:5999246-5999469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
126, 21
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr4:11201764-11201533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr4:54975244-54975016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
189, 19
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:39128480-39128242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:57555917-57555673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
129, 23
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr4:20864-20631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
131, 8
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr4:43369906-43370145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr4:44838949-44839180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
187, 20
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr4:5984095-5984341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
70, 19
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr4:22236534-22236771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
183, 22
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr4:27276599-27276839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
184, 8
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr4:30574397-30574160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 20
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr4:34166031-34166261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr4:54501503-54501745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 20
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr4:61215051-61215294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr4:10732169-10731922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
117, 22
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr4:14919941-14919714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr4:22073369-22073608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
185, 22
               

               
Conread position:
               
3-168
               

               
Cow position:
               
chr4:36724982-36724826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
3-245
               

               
Cow position:
               
chr4:37553095-37553340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
4-246
               

               
Cow position:
               
chr4:51903551-51903305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 104
               

               
Conread position:
               
9-221
               

               
Cow position:
               
chr4:46591604-46591390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
117, 13
               

               
Conread position:
               
9-243
               

               
Cow position:
               
chr4:27511205-27510977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
111, 61
               

               
Conread position:
               
9-246
               

               
Cow position:
               
chr4:46526939-46526702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
169, 74
               

               
Conread position:
               
10-215
               

               
Cow position:
               
chr4:8704927-8704728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
112, 59
               

               
Conread position:
               
12-205
               

               
Cow position:
               
chr4:19322143-19322335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
176, 95
               

               
Conread position:
               
12-210
               

               
Cow position:
               
chr4:123258-123462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
97, 23
               

               
Conread position:
               
12-245
               

               
Cow position:
               
chr4:33910243-33910010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
14-245
               

               
Cow position:
               
chr4:63365439-63365670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 156
               

               
Conread position:
               
19-244
               

               
Cow position:
               
chr4:42673106-42672876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 44
               

               
Conread position:
               
19-245
               

               
Cow position:
               
chr4:19597384-19597609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
169, 58
               

               
Conread position:
               
21-245
               

               
Cow position:
               
chr4:39009896-39009673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
86, 56
               

               
Conread position:
               
22-245
               

               
Cow position:
               
chr4:65891921-65891696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 81
               

               
Conread position:
               
24-151
               

               
Cow position:
               
chr4:29238109-29238242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
24-162
               

               
Cow position:
               
chr4:66118596-66118737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
24-178
               

               
Cow position:
               
chr4:10999780-10999930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
24-180
               

               
Cow position:
               
chr4:11004793-11004947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
50, 90
               

               
Conread position:
               
24-186
               

               
Cow position:
               
chr4:23911656-23911823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
50, 142
               

               
Conread position:
               
24-206
               

               
Cow position:
               
chr4:50203681-50203490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
24-207
               

               
Cow position:
               
chr4:27664939-27664747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
24-211
               

               
Cow position:
               
chr4:47290004-47289808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
24-216
               

               
Cow position:
               
chr4:54667761-54667958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
24-219
               

               
Cow position:
               
chr4:26746409-26746214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
164, 82
               

               
Conread position:
               
24-224
               

               
Cow position:
               
chr4:67392886-67392695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
164, 74
               

               
Conread position:
               
24-233
               

               
Cow position:
               
chr4:11901634-11901847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
24-233
               

               
Cow position:
               
chr4:15905025-15904814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
166, 56
               

               
Conread position:
               
24-235
               

               
Cow position:
               
chr4:17474366-17474151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
43, 97
               

               
Conread position:
               
24-244
               

               
Cow position:
               
chr4:2893954-2893730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
50, 214
               

               
Conread position:
               
24-244
               

               
Cow position:
               
chr4:14942248-14942018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
24-244
               

               
Cow position:
               
chr4:26163046-26163268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 73
               

               
Conread position:
               
24-244
               

               
Cow position:
               
chr4:34209958-34209731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
24-244
               

               
Cow position:
               
chr4:48137838-48137619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 178
               

               
Conread position:
               
24-245
               

               
Cow position:
               
chr4:13668697-13668909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
164, 68
               

               
Conread position:
               
24-245
               

               
Cow position:
               
chr4:34208862-34208632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
24-246
               

               
Cow position:
               
chr4:7249642-7249866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
47, 97
               

               
Conread position:
               
24-246
               

               
Cow position:
               
chr4:15635522-15635740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
164, 53
               

               
Conread position:
               
24-246
               

               
Cow position:
               
chr4:19007972-19007744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
92, 54
               

               
Conread position:
               
24-246
               

               
Cow position:
               
chr4:24118980-24119208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
24-246
               

               
Cow position:
               
chr4:26323664-26323445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
103, 136
               

               
Conread position:
               
24-246
               

               
Cow position:
               
chr4:33421432-33421658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
24-246
               

               
Cow position:
               
chr4:68944244-68944473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
50, 36
               

               
Conread position:
               
25-186
               

               
Cow position:
               
chr4:20502570-20502420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 20
               

               
Conread position:
               
25-192
               

               
Cow position:
               
chr4:46370741-46370570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
26-162
               

               
Cow position:
               
chr4:3689632-3689499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
26-165
               

               
Cow position:
               
chr4:13974044-13974185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 51
               

               
Conread position:
               
26-169
               

               
Cow position:
               
chr4:38935281-38935141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
26-175
               

               
Cow position:
               
chr4:27687849-27687700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
26-186
               

               
Cow position:
               
chr4:41907867-41908026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
26-190
               

               
Cow position:
               
chr4:2602157-2601991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
26-192
               

               
Cow position:
               
chr4:11897373-11897539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
103, 66
               

               
Conread position:
               
26-195
               

               
Cow position:
               
chr4:53999584-53999750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
26-200
               

               
Cow position:
               
chr4:46501277-46501106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
26-204
               

               
Cow position:
               
chr4:49089713-49089539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
161, 51
               

               
Conread position:
               
26-205
               

               
Cow position:
               
chr4:20157492-20157669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
162, 73
               

               
Conread position:
               
26-206
               

               
Cow position:
               
chr4:45367661-45367479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
26-211
               

               
Cow position:
               
chr4:26307574-26307762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
93, 51
               

               
Conread position:
               
26-213
               

               
Cow position:
               
chr4:1237191-1237380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
101, 73
               

               
Conread position:
               
26-213
               

               
Cow position:
               
chr4:31348264-31348458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
48, 38
               

               
Conread position:
               
26-213
               

               
Cow position:
               
chr4:55395686-55395504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
162, 79
               

               
Conread position:
               
26-219
               

               
Cow position:
               
chr4:20299198-20298999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
94, 44
               

               
Conread position:
               
26-219
               

               
Cow position:
               
chr4:54191013-54190830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
26-222
               

               
Cow position:
               
chr4:41185984-41186175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
26-223
               

               
Cow position:
               
chr4:51739784-51739977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
162, 43
               

               
Conread position:
               
26-223
               

               
Cow position:
               
chr4:63349550-63349750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
45, 76
               

               
Conread position:
               
26-230
               

               
Cow position:
               
chr4:11090769-11090967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
160, 12
               

               
Conread position:
               
26-230
               

               
Cow position:
               
chr4:17052676-17052879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
26-231
               

               
Cow position:
               
chr4:7571334-7571127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
111, 52
               

               
Conread position:
               
26-231
               

               
Cow position:
               
chr4:16799263-16799474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
64, 53
               

               
Conread position:
               
26-231
               

               
Cow position:
               
chr4:30690646-30690442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
162, 72
               

               
Conread position:
               
26-233
               

               
Cow position:
               
chr4:27292031-27292247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
105, 53
               

               
Conread position:
               
26-233
               

               
Cow position:
               
chr4:36893282-36893069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
26-233
               

               
Cow position:
               
chr4:42266827-42267026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
162, 54
               

               
Conread position:
               
26-234
               

               
Cow position:
               
chr4:21531719-21531920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
26-239
               

               
Cow position:
               
chr4:19584642-19584414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
26-240
               

               
Cow position:
               
chr4:30974265-30974046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
99, 51
               

               
Conread position:
               
26-240
               

               
Cow position:
               
chr4:45662584-45662791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
162, 53
               

               
Conread position:
               
26-241
               

               
Cow position:
               
chr4:68764446-68764225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
45, 141
               

               
Conread position:
               
26-244
               

               
Cow position:
               
chr4:6653654-6653445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
164, 44
               

               
Conread position:
               
26-244
               

               
Cow position:
               
chr4:27755375-27755600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
152, 200
               

               
Conread position:
               
26-244
               

               
Cow position:
               
chr4:37915413-37915624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr4:4084523-4084740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
162, 53
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr4:12591286-12591507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 81
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr4:23561306-23561079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr4:23646921-23647139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
162, 25
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr4:27178710-27178484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr4:38952477-38952263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
111, 42
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr4:42232583-42232372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
126, 93
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr4:45644383-45644609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr4:46275117-46274897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr4:49794597-49794385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
162, 58
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr4:53209164-53208943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
45, 165
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr4:53832973-53832755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
86, 51
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr4:61391279-61391496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
120, 54
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr4:64040026-64039816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
45, 72
               

               
Conread position:
               
26-246
               

               
Cow position:
               
chr4:16736433-16736209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
45, 212
               

               
Conread position:
               
27-220
               

               
Cow position:
               
chr4:41301066-41301262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
27-223
               

               
Cow position:
               
chr4:3440329-3440132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
161, 31
               

               
Conread position:
               
27-243
               

               
Cow position:
               
chr4:19142217-19141997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
28, 53
               

               
Conread position:
               
27-244
               

               
Cow position:
               
chr4:16859806-16860011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
23, 83
               

               
Conread position:
               
27-244
               

               
Cow position:
               
chr4:19561608-19561400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
161, 50
               

               
Conread position:
               
27-244
               

               
Cow position:
               
chr4:53545952-53545734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
27-245
               

               
Cow position:
               
chr4:570720-570500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
161, 67
               

               
Conread position:
               
27-245
               

               
Cow position:
               
chr4:13590012-13589798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
124, 79
               

               
Conread position:
               
27-245
               

               
Cow position:
               
chr4:22744249-22744033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
27-245
               

               
Cow position:
               
chr4:24371928-24372147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
59, 67
               

               
Conread position:
               
27-245
               

               
Cow position:
               
chr4:26400886-26400661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
27-245
               

               
Cow position:
               
chr4:30219751-30219976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
27-245
               

               
Cow position:
               
chr4:68076605-68076824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
80, 121
               

               
Conread position:
               
27-246
               

               
Cow position:
               
chr4:3990699-3990919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
79, 111
               

               
Conread position:
               
27-246
               

               
Cow position:
               
chr4:14743186-14742962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
27-246
               

               
Cow position:
               
chr4:18095746-18095970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
48, 212
               

               
Conread position:
               
30-180
               

               
Cow position:
               
chr4:10016674-10016830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
30-205
               

               
Cow position:
               
chr4:5629831-5630009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
30-206
               

               
Cow position:
               
chr4:59008448-59008626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
30-215
               

               
Cow position:
               
chr4:3475548-3475364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
157, 31
               

               
Conread position:
               
30-215
               

               
Cow position:
               
chr4:43894890-43895069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
152, 47
               

               
Conread position:
               
30-218
               

               
Cow position:
               
chr4:47348748-47348563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
158, 47
               

               
Conread position:
               
30-219
               

               
Cow position:
               
chr4:23445128-23445321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 137
               

               
Conread position:
               
30-219
               

               
Cow position:
               
chr4:52632044-52632239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
24, 117
               

               
Conread position:
               
30-221
               

               
Cow position:
               
chr4:25888909-25889105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
30-223
               

               
Cow position:
               
chr4:44612925-44612729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
30-243
               

               
Cow position:
               
chr4:19542058-19541826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
30-243
               

               
Cow position:
               
chr4:65650204-65650415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
30-245
               

               
Cow position:
               
chr4:3388468-3388252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
49, 161
               

               
Conread position:
               
31-174
               

               
Cow position:
               
chr4:34924769-34924915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
31-197
               

               
Cow position:
               
chr4:63965069-63965239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 46
               

               
Conread position:
               
31-207
               

               
Cow position:
               
chr4:12259859-12260040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
31-210
               

               
Cow position:
               
chr4:34310530-34310716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
31-214
               

               
Cow position:
               
chr4:48235566-48235374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
31-221
               

               
Cow position:
               
chr4:15462356-15462545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
64, 12
               

               
Conread position:
               
31-223
               

               
Cow position:
               
chr4:45114685-45114880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
31-225
               

               
Cow position:
               
chr4:8801421-8801227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
156, 46
               

               
Conread position:
               
31-244
               

               
Cow position:
               
chr4:44782293-44782079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 46
               

               
Conread position:
               
31-244
               

               
Cow position:
               
chr4:56233607-56233396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
31-245
               

               
Cow position:
               
chr4:14414422-14414640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 174
               

               
Conread position:
               
31-245
               

               
Cow position:
               
chr4:19238159-19237946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
31-245
               

               
Cow position:
               
chr4:28836455-28836236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
40, 164
               

               
Conread position:
               
31-245
               

               
Cow position:
               
chr4:31023369-31023147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
59, 164
               

               
Conread position:
               
31-245
               

               
Cow position:
               
chr4:46668487-46668277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
156, 19
               

               
Conread position:
               
31-246
               

               
Cow position:
               
chr4:4981901-4981676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 86
               

               
Conread position:
               
31-246
               

               
Cow position:
               
chr4:69406291-69406071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
96, 44
               

               
Conread position:
               
32-192
               

               
Cow position:
               
chr4:26659223-26659065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
33-219
               

               
Cow position:
               
chr4:33623641-33623448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
35-245
               

               
Cow position:
               
chr4:56410104-56409886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
35-246
               

               
Cow position:
               
chr4:14513320-14513534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
67, 197
               

               
Conread position:
               
36-246
               

               
Cow position:
               
chr4:8133623-8133831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
151, 99
               

               
Conread position:
               
38-240
               

               
Cow position:
               
chr4:16637686-16637889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
39-245
               

               
Cow position:
               
chr4:29813627-29813829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
35, 98
               

               
Conread position:
               
40-227
               

               
Cow position:
               
chr4:46550299-46550106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
90, 39
               

               
Conread position:
               
41-192
               

               
Cow position:
               
chr4:24688432-24688589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
41-236
               

               
Cow position:
               
chr4:42481101-42480898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
41-244
               

               
Cow position:
               
chr4:39231607-39231818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
52, 25
               

               
Conread position:
               
42-245
               

               
Cow position:
               
chr4:508993-509194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
146, 78
               

               
Conread position:
               
43-246
               

               
Cow position:
               
chr4:59055945-59056136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
53-223
               

               
Cow position:
               
chr4:44024915-44025089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 153
               

               
Conread position:
               
54-224
               

               
Cow position:
               
chr4:22849817-22849985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
134, 72
               

               
Conread position:
               
57-189
               

               
Cow position:
               
chr4:7808480-7808345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
59-214
               

               
Cow position:
               
chr4:51630555-51630392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
63-209
               

               
Cow position:
               
chr4:61066537-61066392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
125, 16
               

               
Conread position:
               
68-245
               

               
Cow position:
               
chr4:10993667-10993840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
120, 137
               

               
Conread position:
               
71-243
               

               
Cow position:
               
chr4:23381925-23382099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
117, 142
               

               
Conread position:
               
72-245
               

               
Cow position:
               
chr4:22528508-22528683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
73-223
               

               
Cow position:
               
chr4:28789241-28789394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
115, 0
               
Show alignments to all cow chromosomes.