Cow genome map
| Conread name: | rssp11_a9.y1 |
| Conread position: | 1-161 |
| Cow position: | chr6:12542940-12543095 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-163 |
| Cow position: | chr6:44984323-44984162 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 117, 19 |
| Conread position: | 1-168 |
| Cow position: | chr6:53453765-53453599 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 73, 21 |
| Conread position: | 1-169 |
| Cow position: | chr6:15447210-15447378 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 95, 20 |
| Conread position: | 1-171 |
| Cow position: | chr6:17334060-17334229 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 1-192 |
| Cow position: | chr6:33277036-33276846 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 74, 20 |
| Conread position: | 1-192 |
| Cow position: | chr6:53519629-53519816 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-192 |
| Cow position: | chr6:53731515-53731328 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-203 |
| Cow position: | chr6:19695803-19695600 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 79, 8 |
| Conread position: | 1-204 |
| Cow position: | chr6:54864677-54864874 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 187, 8 |
| Conread position: | 1-207 |
| Cow position: | chr6:53138928-53139140 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 78, 22 |
| Conread position: | 1-219 |
| Cow position: | chr6:389167-388948 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 189, 78 |
| Conread position: | 1-219 |
| Cow position: | chr6:45160301-45160514 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 189, 22 |
| Conread position: | 1-223 |
| Cow position: | chr6:37149181-37148970 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 210, 20 |
| Conread position: | 1-223 |
| Cow position: | chr6:38441169-38440955 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 187, 22 |
| Conread position: | 1-230 |
| Cow position: | chr6:8804537-8804762 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 191, 20 |
| Conread position: | 1-243 |
| Cow position: | chr6:12928112-12927873 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 187, 22 |
| Conread position: | 1-243 |
| Cow position: | chr6:13741696-13741450 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 55, 181 |
| Conread position: | 1-244 |
| Cow position: | chr6:34076020-34075779 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 1-244 |
| Cow position: | chr6:34196157-34196396 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 187, 20 |
| Conread position: | 1-245 |
| Cow position: | chr6:18988209-18987968 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 26 |
| Conread position: | 1-245 |
| Cow position: | chr6:27851714-27851953 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 1-245 |
| Cow position: | chr6:35181267-35181502 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 20 |
| Conread position: | 1-245 |
| Cow position: | chr6:42565682-42565437 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 126, 8 |
| Conread position: | 1-245 |
| Cow position: | chr6:46292354-46292578 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 226, 20 |
| Conread position: | 1-245 |
| Cow position: | chr6:54294101-54293862 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 187, 8 |
| Conread position: | 1-245 |
| Cow position: | chr6:62925004-62925242 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 187, 8 |
| Conread position: | 1-246 |
| Cow position: | chr6:3952511-3952275 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-246 |
| Cow position: | chr6:10332097-10332356 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 74, 7 |
| Conread position: | 1-246 |
| Cow position: | chr6:17557375-17557125 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 116, 8 |
| Conread position: | 1-246 |
| Cow position: | chr6:35103340-35103574 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 82, 20 |
| Conread position: | 1-246 |
| Cow position: | chr6:35471526-35471776 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 20 |
| Conread position: | 1-246 |
| Cow position: | chr6:51835391-51835150 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 8 |
| Conread position: | 1-246 |
| Cow position: | chr6:58076222-58075978 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 70, 17 |
| Conread position: | 3-245 |
| Cow position: | chr6:50119790-50120034 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 7-195 |
| Cow position: | chr6:48425332-48425517 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 64, 16 |
| Conread position: | 9-245 |
| Cow position: | chr6:53711104-53710867 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 174, 69 |
| Conread position: | 10-204 |
| Cow position: | chr6:33917864-33918057 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 97, 17 |
| Conread position: | 10-219 |
| Cow position: | chr6:20605924-20605711 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 122, 67 |
| Conread position: | 10-246 |
| Cow position: | chr6:27110584-27110339 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 13-245 |
| Cow position: | chr6:9375381-9375623 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 14-229 |
| Cow position: | chr6:54884927-54885146 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 13 |
| Conread position: | 18-206 |
| Cow position: | chr6:1886685-1886875 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 170, 9 |
| Conread position: | 19-160 |
| Cow position: | chr6:50020516-50020369 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 20-213 |
| Cow position: | chr6:50090624-50090423 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 21-216 |
| Cow position: | chr6:21110942-21110749 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 167, 74 |
| Conread position: | 22-246 |
| Cow position: | chr6:5095571-5095804 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 93 |
| Conread position: | 22-246 |
| Cow position: | chr6:10176320-10176548 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 49, 89 |
| Conread position: | 22-246 |
| Cow position: | chr6:16411167-16410946 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 77 |
| Conread position: | 22-246 |
| Cow position: | chr6:19508464-19508681 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 166, 57 |
| Conread position: | 22-246 |
| Cow position: | chr6:66363267-66363494 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 69 |
| Conread position: | 23-245 |
| Cow position: | chr6:61515216-61515446 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 24-151 |
| Cow position: | chr6:4692005-4692136 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 24-167 |
| Cow position: | chr6:58364037-58364180 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 96, 53 |
| Conread position: | 24-172 |
| Cow position: | chr6:65264564-65264708 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 24-174 |
| Cow position: | chr6:9839144-9838987 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 24-192 |
| Cow position: | chr6:12092019-12092177 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 24-192 |
| Cow position: | chr6:48187605-48187774 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 50, 94 |
| Conread position: | 24-202 |
| Cow position: | chr6:52412835-52412652 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 50, 170 |
| Conread position: | 24-205 |
| Cow position: | chr6:46245343-46245532 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 24-206 |
| Cow position: | chr6:58732332-58732524 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 24-210 |
| Cow position: | chr6:59620643-59620455 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 24-223 |
| Cow position: | chr6:15937877-15938075 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 89, 53 |
| Conread position: | 24-223 |
| Cow position: | chr6:49685558-49685358 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 164, 56 |
| Conread position: | 24-224 |
| Cow position: | chr6:16746317-16746112 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 45, 110 |
| Conread position: | 24-232 |
| Cow position: | chr6:60859324-60859542 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 24-237 |
| Cow position: | chr6:1783803-1784013 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 102, 75 |
| Conread position: | 24-237 |
| Cow position: | chr6:7103255-7103476 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 50, 191 |
| Conread position: | 24-242 |
| Cow position: | chr6:3978688-3978907 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 50, 84 |
| Conread position: | 24-245 |
| Cow position: | chr6:22877184-22877403 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 47, 24 |
| Conread position: | 24-245 |
| Cow position: | chr6:35842629-35842412 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 51, 100 |
| Conread position: | 24-245 |
| Cow position: | chr6:36928630-36928404 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 8, 54 |
| Conread position: | 24-245 |
| Cow position: | chr6:46667086-46666857 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 53, 138 |
| Conread position: | 24-245 |
| Cow position: | chr6:47540505-47540277 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 21 |
| Conread position: | 24-245 |
| Cow position: | chr6:65862664-65862437 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 87, 22 |
| Conread position: | 24-246 |
| Cow position: | chr6:2607589-2607364 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 93, 53 |
| Conread position: | 24-246 |
| Cow position: | chr6:50746961-50746727 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 138 |
| Conread position: | 24-246 |
| Cow position: | chr6:53178613-53178390 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 24-246 |
| Cow position: | chr6:54365356-54365573 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 179, 82 |
| Conread position: | 25-192 |
| Cow position: | chr6:7989436-7989606 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 50, 152 |
| Conread position: | 25-237 |
| Cow position: | chr6:61113730-61113509 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 25-245 |
| Cow position: | chr6:16700238-16700013 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 177 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 38, 219 |
| Conread position: | 25-245 |
| Cow position: | chr6:16706976-16706761 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 163, 76 |
| Conread position: | 26-186 |
| Cow position: | chr6:47799264-47799111 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 26-190 |
| Cow position: | chr6:1703790-1703622 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 76, 51 |
| Conread position: | 26-197 |
| Cow position: | chr6:66131278-66131107 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 85 |
| Conread position: | 26-207 |
| Cow position: | chr6:46400439-46400616 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 153, 80 |
| Conread position: | 26-225 |
| Cow position: | chr6:49002761-49002953 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 162, 73 |
| Conread position: | 26-233 |
| Cow position: | chr6:54368926-54369136 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 26-239 |
| Cow position: | chr6:62479191-62479408 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 26-243 |
| Cow position: | chr6:32210656-32210875 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 162, 51 |
| Conread position: | 26-243 |
| Cow position: | chr6:56849984-56849771 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 162, 44 |
| Conread position: | 26-245 |
| Cow position: | chr6:1816892-1817114 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 111, 44 |
| Conread position: | 26-245 |
| Cow position: | chr6:21311776-21312004 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 37, 217 |
| Conread position: | 26-245 |
| Cow position: | chr6:40264228-40264446 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 162, 82 |
| Conread position: | 26-245 |
| Cow position: | chr6:40713528-40713748 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 26-245 |
| Cow position: | chr6:49398642-49398865 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 104, 53 |
| Conread position: | 26-245 |
| Cow position: | chr6:54647549-54647772 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 112, 106 |
| Conread position: | 26-245 |
| Cow position: | chr6:54867486-54867263 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 80, 139 |
| Conread position: | 26-245 |
| Cow position: | chr6:55594365-55594143 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 26-246 |
| Cow position: | chr6:26915302-26915080 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 100, 42 |
| Conread position: | 27-186 |
| Cow position: | chr6:63251950-63252110 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 41, 54 |
| Conread position: | 27-214 |
| Cow position: | chr6:15923028-15923215 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 161, 52 |
| Conread position: | 27-219 |
| Cow position: | chr6:7824734-7824540 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 103, 27 |
| Conread position: | 27-223 |
| Cow position: | chr6:15300847-15301044 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 112, 96 |
| Conread position: | 27-227 |
| Cow position: | chr6:29239911-29239712 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 161, 78 |
| Conread position: | 27-244 |
| Cow position: | chr6:24781585-24781811 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 27-244 |
| Cow position: | chr6:50445789-50446007 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 157 |
| Conread position: | 27-245 |
| Cow position: | chr6:20230857-20231074 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 46, 74 |
| Conread position: | 27-245 |
| Cow position: | chr6:24125311-24125532 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 103, 181 |
| Conread position: | 27-245 |
| Cow position: | chr6:32121882-32121662 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 161, 50 |
| Conread position: | 27-245 |
| Cow position: | chr6:55040240-55040466 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 27-245 |
| Cow position: | chr6:55607841-55608055 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 160, 59 |
| Conread position: | 27-246 |
| Cow position: | chr6:40032164-40031944 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 50 |
| Conread position: | 27-246 |
| Cow position: | chr6:48281969-48281745 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 47, 8 |
| Conread position: | 30-154 |
| Cow position: | chr6:60739984-60739860 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 30-183 |
| Cow position: | chr6:25008678-25008530 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 30-189 |
| Cow position: | chr6:37783388-37783224 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 41, 87 |
| Conread position: | 30-192 |
| Cow position: | chr6:16191642-16191474 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 43, 115 |
| Conread position: | 30-192 |
| Cow position: | chr6:63720163-63720006 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 30-208 |
| Cow position: | chr6:24515225-24515405 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 157, 39 |
| Conread position: | 30-223 |
| Cow position: | chr6:9452801-9452996 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 77, 49 |
| Conread position: | 30-224 |
| Cow position: | chr6:68049405-68049208 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 30-234 |
| Cow position: | chr6:8318195-8318404 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 30-244 |
| Cow position: | chr6:16625909-16625700 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 154, 18 |
| Conread position: | 30-245 |
| Cow position: | chr6:67214713-67214493 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 90, 112 |
| Conread position: | 31-186 |
| Cow position: | chr6:9751078-9751227 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 31-188 |
| Cow position: | chr6:47355791-47355635 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 31-208 |
| Cow position: | chr6:2896723-2896539 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 43, 118 |
| Conread position: | 31-218 |
| Cow position: | chr6:38207524-38207717 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 78, 39 |
| Conread position: | 31-223 |
| Cow position: | chr6:38218638-38218445 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 157, 48 |
| Conread position: | 31-225 |
| Cow position: | chr6:130194-130393 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 158 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 89, 46 |
| Conread position: | 31-236 |
| Cow position: | chr6:3622087-3621873 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 31-243 |
| Cow position: | chr6:35990266-35990468 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 154, 46 |
| Conread position: | 31-244 |
| Cow position: | chr6:52248164-52248385 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 87, 46 |
| Conread position: | 31-245 |
| Cow position: | chr6:8562687-8562467 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 89, 46 |
| Conread position: | 31-246 |
| Cow position: | chr6:11637785-11637992 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 31-246 |
| Cow position: | chr6:21535023-21534809 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 78 |
| Conread position: | 32-218 |
| Cow position: | chr6:38614782-38614602 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 156, 45 |
| Conread position: | 33-184 |
| Cow position: | chr6:36011655-36011509 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 44, 88 |
| Conread position: | 33-215 |
| Cow position: | chr6:5462087-5462267 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 94 |
| Conread position: | 33-245 |
| Cow position: | chr6:12500827-12500608 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 35-218 |
| Cow position: | chr6:59301857-59302048 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 35-245 |
| Cow position: | chr6:6769239-6769028 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 102, 50 |
| Conread position: | 35-245 |
| Cow position: | chr6:52562204-52562417 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 50, 188 |
| Conread position: | 35-245 |
| Cow position: | chr6:54140773-54140569 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 42, 73 |
| Conread position: | 35-246 |
| Cow position: | chr6:33461048-33460838 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 142, 85 |
| Conread position: | 36-238 |
| Cow position: | chr6:28559386-28559173 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 38-246 |
| Cow position: | chr6:63272648-63272867 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 39-221 |
| Cow position: | chr6:14949519-14949706 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 39-245 |
| Cow position: | chr6:46681768-46681560 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 149, 188 |
| Conread position: | 39-246 |
| Cow position: | chr6:10649065-10649268 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 79, 113 |
| Conread position: | 40-221 |
| Cow position: | chr6:5445584-5445404 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 138 |
| Conread position: | 41-246 |
| Cow position: | chr6:19681565-19681766 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 36, 42 |
| Conread position: | 43-246 |
| Cow position: | chr6:17067863-17068070 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 160 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 46-245 |
| Cow position: | chr6:3719052-3719257 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 168 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 79, 10 |
| Conread position: | 48-244 |
| Cow position: | chr6:57149001-57149203 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 51-184 |
| Cow position: | chr6:88957-89093 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 78, 28 |
| Conread position: | 51-192 |
| Cow position: | chr6:21812678-21812537 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 53-243 |
| Cow position: | chr6:65903671-65903863 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 53-243 |
| Cow position: | chr6:65904322-65904514 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 55-246 |
| Cow position: | chr6:35769539-35769732 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 133, 24 |
| Conread position: | 69-240 |
| Cow position: | chr6:37331891-37331722 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 118, 61 |
| Conread position: | 72-245 |
| Cow position: | chr6:60152963-60152787 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 96-243 |
| Cow position: | chr6:56502212-56502060 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 92, 0 |
Show alignments to all cow chromosomes.