Cow genome map
| Conread name: | rssp11_a9.y1 |
| Conread position: | 1-159 |
| Cow position: | chr9:50667498-50667653 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-186 |
| Cow position: | chr9:38875501-38875318 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 119, 20 |
| Conread position: | 1-192 |
| Cow position: | chr9:64559809-64559625 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-202 |
| Cow position: | chr9:40105541-40105751 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 22 |
| Conread position: | 1-218 |
| Cow position: | chr9:1984450-1984231 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 68, 22 |
| Conread position: | 1-225 |
| Cow position: | chr9:50076133-50076363 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 119, 22 |
| Conread position: | 1-227 |
| Cow position: | chr9:32371685-32371460 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 164, 8 |
| Conread position: | 1-233 |
| Cow position: | chr9:43207304-43207074 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 1-233 |
| Cow position: | chr9:48343677-48343907 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 113, 22 |
| Conread position: | 1-237 |
| Cow position: | chr9:20322029-20321803 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 172, 8 |
| Conread position: | 1-238 |
| Cow position: | chr9:26390843-26391075 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-245 |
| Cow position: | chr9:5500933-5501167 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 187, 20 |
| Conread position: | 1-245 |
| Cow position: | chr9:15805845-15805603 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 8 |
| Conread position: | 1-245 |
| Cow position: | chr9:26577779-26577544 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 187, 22 |
| Conread position: | 1-245 |
| Cow position: | chr9:28726645-28726408 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 187, 20 |
| Conread position: | 1-245 |
| Cow position: | chr9:31347031-31347271 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 185, 20 |
| Conread position: | 1-245 |
| Cow position: | chr9:38343966-38344213 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 20 |
| Conread position: | 1-245 |
| Cow position: | chr9:42497901-42498147 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 22 |
| Conread position: | 1-245 |
| Cow position: | chr9:43871054-43871290 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 20 |
| Conread position: | 1-245 |
| Cow position: | chr9:50080971-50080728 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 20 |
| Conread position: | 1-245 |
| Cow position: | chr9:54997954-54997707 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 188 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 119, 25 |
| Conread position: | 1-246 |
| Cow position: | chr9:7363100-7363354 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 76, 20 |
| Conread position: | 1-246 |
| Cow position: | chr9:7409853-7410101 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 1-246 |
| Cow position: | chr9:17411116-17410870 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 1-246 |
| Cow position: | chr9:26403860-26404108 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 22 |
| Conread position: | 1-246 |
| Cow position: | chr9:29034955-29034709 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 187, 20 |
| Conread position: | 1-246 |
| Cow position: | chr9:35904670-35904432 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 187, 22 |
| Conread position: | 2-246 |
| Cow position: | chr9:7866139-7866384 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 72, 19 |
| Conread position: | 4-224 |
| Cow position: | chr9:35306039-35305824 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 67, 17 |
| Conread position: | 9-223 |
| Cow position: | chr9:26310634-26310856 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 109, 68 |
| Conread position: | 9-246 |
| Cow position: | chr9:31640243-31639999 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 10-245 |
| Cow position: | chr9:57951241-57951012 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 16 |
| Conread position: | 13-244 |
| Cow position: | chr9:61997516-61997279 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 20-233 |
| Cow position: | chr9:31662555-31662775 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 54, 7 |
| Conread position: | 22-173 |
| Cow position: | chr9:6840094-6840254 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 22-208 |
| Cow position: | chr9:51566402-51566207 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 48, 110 |
| Conread position: | 22-219 |
| Cow position: | chr9:44709917-44710113 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 166, 144 |
| Conread position: | 22-233 |
| Cow position: | chr9:3807648-3807431 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 105, 17 |
| Conread position: | 22-244 |
| Cow position: | chr9:20738794-20739020 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 57, 79 |
| Conread position: | 22-245 |
| Cow position: | chr9:18002859-18002634 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 214 |
| Conread position: | 22-246 |
| Cow position: | chr9:63784833-63784607 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 8 |
| Conread position: | 23-245 |
| Cow position: | chr9:35375522-35375739 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 24-152 |
| Cow position: | chr9:43048534-43048404 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 24-177 |
| Cow position: | chr9:61493115-61493274 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 24-200 |
| Cow position: | chr9:41995804-41995986 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 24-208 |
| Cow position: | chr9:47472785-47472977 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 24-226 |
| Cow position: | chr9:35100962-35101166 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 161 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 164, 53 |
| Conread position: | 24-233 |
| Cow position: | chr9:10010896-10011108 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 49, 95 |
| Conread position: | 24-233 |
| Cow position: | chr9:12428413-12428197 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 51, 23 |
| Conread position: | 24-236 |
| Cow position: | chr9:20318985-20318769 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 48, 101 |
| Conread position: | 24-238 |
| Cow position: | chr9:44914994-44914787 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 161, 82 |
| Conread position: | 24-243 |
| Cow position: | chr9:22151988-22151772 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 164, 53 |
| Conread position: | 24-244 |
| Cow position: | chr9:30402326-30402103 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 68, 89 |
| Conread position: | 24-245 |
| Cow position: | chr9:5227076-5226847 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 24-245 |
| Cow position: | chr9:15982990-15982763 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 179 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 50, 158 |
| Conread position: | 24-245 |
| Cow position: | chr9:31077586-31077360 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 24-245 |
| Cow position: | chr9:38961340-38961119 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 60, 53 |
| Conread position: | 24-246 |
| Cow position: | chr9:8997644-8997875 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 24-246 |
| Cow position: | chr9:10092298-10092076 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 53, 91 |
| Conread position: | 24-246 |
| Cow position: | chr9:18380957-18381179 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 164, 27 |
| Conread position: | 24-246 |
| Cow position: | chr9:21030403-21030636 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 24-246 |
| Cow position: | chr9:29185038-29184818 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 164, 53 |
| Conread position: | 24-246 |
| Cow position: | chr9:38184390-38184159 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 25-224 |
| Cow position: | chr9:36999965-36999764 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 163, 29 |
| Conread position: | 26-191 |
| Cow position: | chr9:3782456-3782624 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 26-207 |
| Cow position: | chr9:27077150-27076971 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 162, 43 |
| Conread position: | 26-208 |
| Cow position: | chr9:1712380-1712207 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 26-208 |
| Cow position: | chr9:37069473-37069288 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 26-209 |
| Cow position: | chr9:10877775-10877584 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 26-209 |
| Cow position: | chr9:29684244-29684427 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 66, 51 |
| Conread position: | 26-211 |
| Cow position: | chr9:24997423-24997232 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 71, 51 |
| Conread position: | 26-219 |
| Cow position: | chr9:35849996-35850190 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 162, 53 |
| Conread position: | 26-219 |
| Cow position: | chr9:64517003-64516805 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 26-220 |
| Cow position: | chr9:3070324-3070130 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 45, 84 |
| Conread position: | 26-220 |
| Cow position: | chr9:10144380-10144179 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 26-221 |
| Cow position: | chr9:29825133-29825323 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 26-224 |
| Cow position: | chr9:35533856-35533655 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 43, 82 |
| Conread position: | 26-224 |
| Cow position: | chr9:42445883-42445688 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 26-233 |
| Cow position: | chr9:5161968-5161765 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 26-233 |
| Cow position: | chr9:34103373-34103583 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 110, 83 |
| Conread position: | 26-242 |
| Cow position: | chr9:34919166-34918969 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 26-243 |
| Cow position: | chr9:55534521-55534294 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 26-244 |
| Cow position: | chr9:9490887-9491105 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 45, 105 |
| Conread position: | 26-245 |
| Cow position: | chr9:5141176-5141391 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 54 |
| Conread position: | 26-245 |
| Cow position: | chr9:19714171-19714388 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 162, 59 |
| Conread position: | 26-245 |
| Cow position: | chr9:21888263-21888487 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 26-245 |
| Cow position: | chr9:22227986-22227767 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 162, 51 |
| Conread position: | 26-245 |
| Cow position: | chr9:27697632-27697414 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 162, 68 |
| Conread position: | 26-245 |
| Cow position: | chr9:34000527-34000294 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 45, 220 |
| Conread position: | 26-245 |
| Cow position: | chr9:35167268-35167489 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 164, 81 |
| Conread position: | 26-245 |
| Cow position: | chr9:36445725-36445939 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 28 |
| Conread position: | 26-245 |
| Cow position: | chr9:41679842-41680051 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 162, 42 |
| Conread position: | 26-246 |
| Cow position: | chr9:5509818-5510043 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 51 |
| Conread position: | 26-246 |
| Cow position: | chr9:8998453-8998674 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 114, 51 |
| Conread position: | 26-246 |
| Cow position: | chr9:22616721-22616938 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 26-246 |
| Cow position: | chr9:62442387-62442600 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 162, 59 |
| Conread position: | 27-215 |
| Cow position: | chr9:9416307-9416119 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 81 |
| Conread position: | 27-223 |
| Cow position: | chr9:30138226-30138423 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 161, 42 |
| Conread position: | 27-224 |
| Cow position: | chr9:40542216-40542410 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 48, 55 |
| Conread position: | 27-227 |
| Cow position: | chr9:22696318-22696516 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 27-235 |
| Cow position: | chr9:53257962-53257756 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 27-241 |
| Cow position: | chr9:59924641-59924857 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 145, 41 |
| Conread position: | 27-243 |
| Cow position: | chr9:42998370-42998146 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 161, 113 |
| Conread position: | 27-245 |
| Cow position: | chr9:3387788-3388009 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 160, 144 |
| Conread position: | 27-245 |
| Cow position: | chr9:5621937-5621713 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 27, 53 |
| Conread position: | 27-245 |
| Cow position: | chr9:21460055-21459837 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 108, 43 |
| Conread position: | 27-245 |
| Cow position: | chr9:25657606-25657843 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 27-245 |
| Cow position: | chr9:32676777-32677000 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 46, 167 |
| Conread position: | 27-245 |
| Cow position: | chr9:39152581-39152369 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 162, 27 |
| Conread position: | 27-245 |
| Cow position: | chr9:47906183-47905962 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 161, 92 |
| Conread position: | 27-246 |
| Cow position: | chr9:32812442-32812665 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 50 |
| Conread position: | 30-192 |
| Cow position: | chr9:33598081-33598243 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 30-194 |
| Cow position: | chr9:22638203-22638364 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 30-210 |
| Cow position: | chr9:26086162-26086350 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 30-241 |
| Cow position: | chr9:20989357-20989141 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 48, 208 |
| Conread position: | 30-245 |
| Cow position: | chr9:6192361-6192144 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 91, 28 |
| Conread position: | 30-245 |
| Cow position: | chr9:47537942-47538166 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 30-245 |
| Cow position: | chr9:64155759-64155538 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 97, 47 |
| Conread position: | 30-246 |
| Cow position: | chr9:17785361-17785140 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 41, 77 |
| Conread position: | 31-213 |
| Cow position: | chr9:11319532-11319358 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 98, 46 |
| Conread position: | 31-223 |
| Cow position: | chr9:49764758-49764952 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 91, 48 |
| Conread position: | 31-244 |
| Cow position: | chr9:5268651-5268873 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 31-245 |
| Cow position: | chr9:8534589-8534368 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 40, 184 |
| Conread position: | 31-245 |
| Cow position: | chr9:23431044-23430829 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 89, 48 |
| Conread position: | 31-246 |
| Cow position: | chr9:24726578-24726359 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 58 |
| Conread position: | 31-246 |
| Cow position: | chr9:48107017-48106798 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 144, 89 |
| Conread position: | 32-233 |
| Cow position: | chr9:36623345-36623146 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 39, 63 |
| Conread position: | 33-227 |
| Cow position: | chr9:60110345-60110534 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 155, 28 |
| Conread position: | 34-207 |
| Cow position: | chr9:55287793-55287611 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 91, 37 |
| Conread position: | 34-244 |
| Cow position: | chr9:9461551-9461340 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 154, 189 |
| Conread position: | 34-246 |
| Cow position: | chr9:41416456-41416669 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 73 |
| Conread position: | 34-246 |
| Cow position: | chr9:47955125-47954906 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 35-204 |
| Cow position: | chr9:4128678-4128506 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 149, 34 |
| Conread position: | 35-224 |
| Cow position: | chr9:20901019-20900834 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 39, 50 |
| Conread position: | 35-245 |
| Cow position: | chr9:42585520-42585308 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 117 |
| Conread position: | 36-244 |
| Cow position: | chr9:20406740-20406953 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 37-243 |
| Cow position: | chr9:54681612-54681817 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 153, 47 |
| Conread position: | 37-246 |
| Cow position: | chr9:13994291-13994507 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 38-233 |
| Cow position: | chr9:18008755-18008564 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 150, 82 |
| Conread position: | 38-245 |
| Cow position: | chr9:26434952-26434746 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 150, 68 |
| Conread position: | 39-245 |
| Cow position: | chr9:9443488-9443274 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 166 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 39-246 |
| Cow position: | chr9:1997249-1997448 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 149, 50 |
| Conread position: | 40-245 |
| Cow position: | chr9:53109642-53109840 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 41-224 |
| Cow position: | chr9:58133915-58133727 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 41-245 |
| Cow position: | chr9:6879878-6880086 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 86, 13 |
| Conread position: | 41-245 |
| Cow position: | chr9:61739029-61739234 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 149, 88 |
| Conread position: | 41-246 |
| Cow position: | chr9:37016995-37017203 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 47-245 |
| Cow position: | chr9:10940635-10940430 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 47-245 |
| Cow position: | chr9:22754904-22755108 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 75, 158 |
| Conread position: | 48-217 |
| Cow position: | chr9:13802022-13802183 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 140, 41 |
| Conread position: | 48-246 |
| Cow position: | chr9:4646209-4646015 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 48-246 |
| Cow position: | chr9:23027917-23028119 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 21 |
| Conread position: | 57-233 |
| Cow position: | chr9:2034295-2034477 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 73, 22 |
| Conread position: | 59-216 |
| Cow position: | chr9:5399848-5400004 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 59-239 |
| Cow position: | chr9:34355800-34355617 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 70, 160 |
| Conread position: | 59-245 |
| Cow position: | chr9:10003884-10004075 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 62-245 |
| Cow position: | chr9:6952223-6952408 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 110, 17 |
| Conread position: | 63-240 |
| Cow position: | chr9:58451966-58451786 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 57, 15 |
| Conread position: | 64-224 |
| Cow position: | chr9:2977513-2977678 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 64-246 |
| Cow position: | chr9:54666037-54666223 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 68, 173 |
| Conread position: | 71-244 |
| Cow position: | chr9:24619354-24619525 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 165, 49 |
| Conread position: | 71-244 |
| Cow position: | chr9:26099480-26099660 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 117, 10 |
| Conread position: | 72-245 |
| Cow position: | chr9:62668540-62668722 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 75-223 |
| Cow position: | chr9:49689081-49689233 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 78-245 |
| Cow position: | chr9:36586671-36586501 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 109, 0 |
Show alignments to all cow chromosomes.