Cow genome map
| Conread name: | rssp11_a9.y1 |
| Conread position: | 1-131 |
| Cow position: | chrX:29723722-29723596 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-150 |
| Cow position: | chrX:27228108-27227962 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 70, 20 |
| Conread position: | 1-159 |
| Cow position: | chrX:22387262-22387421 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 119, 20 |
| Conread position: | 1-163 |
| Cow position: | chrX:29680280-29680438 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 141, 20 |
| Conread position: | 1-176 |
| Cow position: | chrX:11633660-11633488 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 80, 20 |
| Conread position: | 1-185 |
| Cow position: | chrX:4091628-4091448 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 71, 22 |
| Conread position: | 1-192 |
| Cow position: | chrX:46315397-46315587 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 130, 20 |
| Conread position: | 1-208 |
| Cow position: | chrX:29509461-29509669 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 68, 20 |
| Conread position: | 1-209 |
| Cow position: | chrX:44396998-44396789 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 147, 20 |
| Conread position: | 1-215 |
| Cow position: | chrX:39558370-39558580 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 187, 20 |
| Conread position: | 1-217 |
| Cow position: | chrX:41199085-41198870 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 83, 19 |
| Conread position: | 1-219 |
| Cow position: | chrX:17662613-17662833 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 130, 20 |
| Conread position: | 1-234 |
| Cow position: | chrX:28846901-28847130 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 187, 22 |
| Conread position: | 1-235 |
| Cow position: | chrX:23497688-23497915 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 20 |
| Conread position: | 1-238 |
| Cow position: | chrX:41743892-41743658 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 22 |
| Conread position: | 1-241 |
| Cow position: | chrX:32020139-32020380 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 1-244 |
| Cow position: | chrX:5017434-5017667 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 187, 8 |
| Conread position: | 1-244 |
| Cow position: | chrX:45403847-45404095 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 1-245 |
| Cow position: | chrX:15147207-15147448 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 20 |
| Conread position: | 1-245 |
| Cow position: | chrX:28845811-28845582 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 189, 20 |
| Conread position: | 1-245 |
| Cow position: | chrX:38439458-38439211 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 20 |
| Conread position: | 1-245 |
| Cow position: | chrX:40647966-40647716 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 20 |
| Conread position: | 1-245 |
| Cow position: | chrX:42994593-42994352 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 20 |
| Conread position: | 1-246 |
| Cow position: | chrX:12116026-12115778 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 1-246 |
| Cow position: | chrX:12309406-12309651 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 125, 7 |
| Conread position: | 1-246 |
| Cow position: | chrX:26440798-26441043 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 20 |
| Conread position: | 1-246 |
| Cow position: | chrX:35681321-35681072 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 70, 22 |
| Conread position: | 2-246 |
| Cow position: | chrX:47873357-47873604 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 71, 19 |
| Conread position: | 13-246 |
| Cow position: | chrX:48195065-48195304 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 14-206 |
| Cow position: | chrX:6265627-6265809 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 64 |
| Conread position: | 14-245 |
| Cow position: | chrX:45598630-45598868 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 113, 63 |
| Conread position: | 20-192 |
| Cow position: | chrX:16323999-16324170 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 90 |
| Conread position: | 20-243 |
| Cow position: | chrX:1055429-1055648 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 51, 32 |
| Conread position: | 20-246 |
| Cow position: | chrX:35387937-35388170 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 100, 57 |
| Conread position: | 21-223 |
| Cow position: | chrX:23514051-23514258 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 169 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 127, 56 |
| Conread position: | 22-230 |
| Cow position: | chrX:6278537-6278753 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 22-246 |
| Cow position: | chrX:13868666-13868434 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 49, 220 |
| Conread position: | 24-176 |
| Cow position: | chrX:44657000-44657155 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 24-181 |
| Cow position: | chrX:47484304-47484467 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 24-183 |
| Cow position: | chrX:33000864-33000706 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 103, 53 |
| Conread position: | 24-192 |
| Cow position: | chrX:10831532-10831703 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 103, 53 |
| Conread position: | 24-192 |
| Cow position: | chrX:27174957-27174789 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-195 |
| Cow position: | chrX:46587781-46587608 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 24-206 |
| Cow position: | chrX:16541710-16541899 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 24-210 |
| Cow position: | chrX:48684264-48684450 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 47, 86 |
| Conread position: | 24-217 |
| Cow position: | chrX:11856389-11856195 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 164, 9 |
| Conread position: | 24-217 |
| Cow position: | chrX:30962912-30963106 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 164, 96 |
| Conread position: | 24-217 |
| Cow position: | chrX:48010562-48010360 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 24-219 |
| Cow position: | chrX:15815046-15814861 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 164, 15 |
| Conread position: | 24-224 |
| Cow position: | chrX:34662886-34663080 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 50, 72 |
| Conread position: | 24-237 |
| Cow position: | chrX:28878208-28878416 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 53, 62 |
| Conread position: | 24-243 |
| Cow position: | chrX:30133359-30133584 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 47, 140 |
| Conread position: | 24-244 |
| Cow position: | chrX:5872282-5872055 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 47, 217 |
| Conread position: | 24-244 |
| Cow position: | chrX:8731048-8730818 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 24-244 |
| Cow position: | chrX:17498046-17497835 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 53 |
| Conread position: | 24-245 |
| Cow position: | chrX:8925662-8925444 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 170, 46 |
| Conread position: | 24-245 |
| Cow position: | chrX:14924962-14924738 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 145 |
| Conread position: | 24-245 |
| Cow position: | chrX:30922147-30921923 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 50, 135 |
| Conread position: | 24-245 |
| Cow position: | chrX:40183382-40183612 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 24-245 |
| Cow position: | chrX:41403940-41403699 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 24-245 |
| Cow position: | chrX:41410488-41410247 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 24-245 |
| Cow position: | chrX:42461783-42462010 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 75, 46 |
| Conread position: | 24-246 |
| Cow position: | chrX:2467847-2467617 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 51, 205 |
| Conread position: | 24-246 |
| Cow position: | chrX:6234491-6234698 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 24-246 |
| Cow position: | chrX:11581906-11581671 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 45, 80 |
| Conread position: | 24-246 |
| Cow position: | chrX:15485663-15485888 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 213 |
| Conread position: | 24-246 |
| Cow position: | chrX:23563829-23564060 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 24-246 |
| Cow position: | chrX:27705548-27705330 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 53, 82 |
| Conread position: | 24-246 |
| Cow position: | chrX:33020445-33020223 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 24-246 |
| Cow position: | chrX:34454626-34454406 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 24-246 |
| Cow position: | chrX:35609950-35609723 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 24-246 |
| Cow position: | chrX:40826790-40827010 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 50, 80 |
| Conread position: | 24-246 |
| Cow position: | chrX:44834848-44835079 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 24-246 |
| Cow position: | chrX:47967562-47967337 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 50, 82 |
| Conread position: | 25-175 |
| Cow position: | chrX:1505671-1505523 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 96 |
| Conread position: | 25-176 |
| Cow position: | chrX:23785622-23785463 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 25-185 |
| Cow position: | chrX:45149141-45148975 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 26-129 |
| Cow position: | chrX:11614659-11614556 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 83 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-177 |
| Cow position: | chrX:43730259-43730406 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 26-178 |
| Cow position: | chrX:8869445-8869601 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 94, 50 |
| Conread position: | 26-186 |
| Cow position: | chrX:43779887-43780053 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 67, 56 |
| Conread position: | 26-197 |
| Cow position: | chrX:37781152-37781327 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 77, 54 |
| Conread position: | 26-206 |
| Cow position: | chrX:7336788-7336613 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 122, 145 |
| Conread position: | 26-213 |
| Cow position: | chrX:7721948-7721754 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 80, 51 |
| Conread position: | 26-217 |
| Cow position: | chrX:13382289-13382090 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 26-219 |
| Cow position: | chrX:11589628-11589828 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 111, 106 |
| Conread position: | 26-219 |
| Cow position: | chrX:45113578-45113392 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 74 |
| Conread position: | 26-220 |
| Cow position: | chrX:38549406-38549211 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 101, 40 |
| Conread position: | 26-223 |
| Cow position: | chrX:2206591-2206784 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 162, 64 |
| Conread position: | 26-223 |
| Cow position: | chrX:27394061-27394254 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 159 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 161, 52 |
| Conread position: | 26-223 |
| Cow position: | chrX:43049308-43049102 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 26-234 |
| Cow position: | chrX:37232372-37232158 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 103, 51 |
| Conread position: | 26-235 |
| Cow position: | chrX:42338983-42339188 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 162, 51 |
| Conread position: | 26-236 |
| Cow position: | chrX:9997376-9997586 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 162, 42 |
| Conread position: | 26-244 |
| Cow position: | chrX:42874943-42874717 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 26-244 |
| Cow position: | chrX:46722775-46723002 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 26-245 |
| Cow position: | chrX:7571862-7571644 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 164, 51 |
| Conread position: | 26-245 |
| Cow position: | chrX:8797212-8796988 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 212 |
| Conread position: | 26-245 |
| Cow position: | chrX:12249761-12249539 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 164, 32 |
| Conread position: | 26-245 |
| Cow position: | chrX:18194875-18194651 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 26-245 |
| Cow position: | chrX:19015397-19015180 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 51 |
| Conread position: | 26-245 |
| Cow position: | chrX:33639932-33639703 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 49, 25 |
| Conread position: | 26-245 |
| Cow position: | chrX:34401957-34401735 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 51 |
| Conread position: | 26-246 |
| Cow position: | chrX:161372-161165 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 77, 56 |
| Conread position: | 26-246 |
| Cow position: | chrX:4123797-4123572 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 47, 89 |
| Conread position: | 26-246 |
| Cow position: | chrX:34502881-34502660 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 51 |
| Conread position: | 26-246 |
| Cow position: | chrX:38227134-38227353 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 46, 16 |
| Conread position: | 26-246 |
| Cow position: | chrX:47481761-47481535 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 27-184 |
| Cow position: | chrX:32420178-32420020 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 51 |
| Conread position: | 27-223 |
| Cow position: | chrX:21672514-21672311 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 27-223 |
| Cow position: | chrX:44053216-44053018 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 122, 52 |
| Conread position: | 27-224 |
| Cow position: | chrX:39938565-39938758 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 81, 34 |
| Conread position: | 27-237 |
| Cow position: | chrX:24365867-24366083 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 44, 159 |
| Conread position: | 27-238 |
| Cow position: | chrX:25035421-25035642 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 27-239 |
| Cow position: | chrX:7497198-7496989 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 161, 30 |
| Conread position: | 27-245 |
| Cow position: | chrX:151863-151639 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 122 |
| Conread position: | 27-245 |
| Cow position: | chrX:45373329-45373554 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 28, 143 |
| Conread position: | 27-245 |
| Cow position: | chrX:48227650-48227877 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 27-246 |
| Cow position: | chrX:8899988-8899761 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 27-246 |
| Cow position: | chrX:20697646-20697866 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 49, 202 |
| Conread position: | 27-246 |
| Cow position: | chrX:24287967-24288176 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 84, 50 |
| Conread position: | 27-246 |
| Cow position: | chrX:27516487-27516270 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 159, 83 |
| Conread position: | 27-246 |
| Cow position: | chrX:31489478-31489249 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 49, 157 |
| Conread position: | 27-246 |
| Cow position: | chrX:40452251-40452476 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 50 |
| Conread position: | 29-244 |
| Cow position: | chrX:11844288-11844499 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 45, 119 |
| Conread position: | 29-245 |
| Cow position: | chrX:24105584-24105364 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 30-178 |
| Cow position: | chrX:37541080-37540932 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 44, 92 |
| Conread position: | 30-233 |
| Cow position: | chrX:38218665-38218465 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 88, 47 |
| Conread position: | 30-245 |
| Cow position: | chrX:10412031-10412248 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 90, 18 |
| Conread position: | 30-246 |
| Cow position: | chrX:1176024-1176237 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 99, 49 |
| Conread position: | 30-246 |
| Cow position: | chrX:25238129-25237915 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 24 |
| Conread position: | 30-246 |
| Cow position: | chrX:36778367-36778142 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 31-215 |
| Cow position: | chrX:36975906-36975717 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 31-222 |
| Cow position: | chrX:4942800-4942988 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 157, 48 |
| Conread position: | 31-223 |
| Cow position: | chrX:9855259-9855060 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 31-223 |
| Cow position: | chrX:9954100-9953901 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 31-223 |
| Cow position: | chrX:44961703-44961507 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 94, 68 |
| Conread position: | 31-224 |
| Cow position: | chrX:30832893-30833079 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 31-239 |
| Cow position: | chrX:7718810-7718596 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 94, 46 |
| Conread position: | 31-244 |
| Cow position: | chrX:14599487-14599271 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 96, 38 |
| Conread position: | 31-245 |
| Cow position: | chrX:15545848-15545635 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 69 |
| Conread position: | 31-246 |
| Cow position: | chrX:21665638-21665856 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 32-206 |
| Cow position: | chrX:6488530-6488363 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 151, 75 |
| Conread position: | 32-223 |
| Cow position: | chrX:34543741-34543547 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 155 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 42, 122 |
| Conread position: | 33-221 |
| Cow position: | chrX:6640082-6639886 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 33-245 |
| Cow position: | chrX:15007197-15007413 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 33-245 |
| Cow position: | chrX:26883182-26883397 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 93, 19 |
| Conread position: | 34-219 |
| Cow position: | chrX:41167013-41167200 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 35-198 |
| Cow position: | chrX:9425790-9425956 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 73, 42 |
| Conread position: | 35-224 |
| Cow position: | chrX:1514456-1514645 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 35-244 |
| Cow position: | chrX:34754237-34754453 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 35-245 |
| Cow position: | chrX:6544206-6543994 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 44 |
| Conread position: | 35-245 |
| Cow position: | chrX:35268832-35268628 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 153, 42 |
| Conread position: | 39-245 |
| Cow position: | chrX:32188412-32188621 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 40-244 |
| Cow position: | chrX:21795443-21795235 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 41-207 |
| Cow position: | chrX:10437715-10437889 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 41-214 |
| Cow position: | chrX:14900779-14900952 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 147, 37 |
| Conread position: | 41-245 |
| Cow position: | chrX:31442877-31443083 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 47-245 |
| Cow position: | chrX:24587511-24587716 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 48-184 |
| Cow position: | chrX:29544940-29545078 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 89, 84 |
| Conread position: | 53-223 |
| Cow position: | chrX:38935220-38935041 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 53-245 |
| Cow position: | chrX:43647811-43648006 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 5, 29 |
| Conread position: | 54-245 |
| Cow position: | chrX:7695680-7695501 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 134, 55 |
| Conread position: | 57-245 |
| Cow position: | chrX:11674993-11674796 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 120, 22 |
| Conread position: | 59-233 |
| Cow position: | chrX:42507720-42507897 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 71-212 |
| Cow position: | chrX:18812169-18812029 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 86-224 |
| Cow position: | chrX:33538847-33538707 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 98, 61 |
Show alignments to all cow chromosomes.