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Cow genome map

           
Conread name:
           
rssp21_g15.y1
        

               
Conread position:
               
213-445
               

               
Cow position:
               
chr10:54263177-54263415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
69, 214
               

               
Conread position:
               
214-425
               

               
Cow position:
               
chr10:44771608-44771819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
224-423
               

               
Cow position:
               
chr10:2857016-2857217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 7
               

               
Conread position:
               
228-422
               

               
Cow position:
               
chr10:42371912-42371706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
78, 25
               

               
Conread position:
               
230-445
               

               
Cow position:
               
chr10:48316333-48316131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
232-417
               

               
Cow position:
               
chr10:67443140-67442957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
124, 21
               

               
Conread position:
               
236-446
               

               
Cow position:
               
chr10:69621466-69621676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
238-434
               

               
Cow position:
               
chr10:60251097-60250890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
240-431
               

               
Cow position:
               
chr10:9576065-9575871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
242-445
               

               
Cow position:
               
chr10:10048659-10048871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
114, 23
               

               
Conread position:
               
242-445
               

               
Cow position:
               
chr10:11059743-11059948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
112, 17
               

               
Conread position:
               
244-431
               

               
Cow position:
               
chr10:4626513-4626703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
119, 9
               

               
Conread position:
               
246-431
               

               
Cow position:
               
chr10:55395987-55395801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
248-409
               

               
Cow position:
               
chr10:61982378-61982546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
248-429
               

               
Cow position:
               
chr10:35638146-35637966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
108, 17
               

               
Conread position:
               
248-442
               

               
Cow position:
               
chr10:41132256-41132450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
5, 84
               

               
Conread position:
               
248-443
               

               
Cow position:
               
chr10:44863638-44863838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
112, 17
               

               
Conread position:
               
248-445
               

               
Cow position:
               
chr10:6174300-6174115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 17
               

               
Conread position:
               
248-445
               

               
Cow position:
               
chr10:62219826-62220032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
250-417
               

               
Cow position:
               
chr10:35486444-35486271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
251-436
               

               
Cow position:
               
chr10:55271033-55270833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
251-436
               

               
Cow position:
               
chr10:60237098-60236918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
251-442
               

               
Cow position:
               
chr10:49923378-49923176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
252-354
               

               
Cow position:
               
chr10:57457626-57457727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
252-356
               

               
Cow position:
               
chr10:34430229-34430127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
252-363
               

               
Cow position:
               
chr10:65359700-65359811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
252-407
               

               
Cow position:
               
chr10:52278720-52278875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 148
               

               
Conread position:
               
252-409
               

               
Cow position:
               
chr10:1488828-1488984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
93, 100
               

               
Conread position:
               
252-411
               

               
Cow position:
               
chr10:54699709-54699547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
252-412
               

               
Cow position:
               
chr10:46575507-46575665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
102, 87
               

               
Conread position:
               
252-416
               

               
Cow position:
               
chr10:17448202-17448046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
252-416
               

               
Cow position:
               
chr10:20133878-20133711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 79
               

               
Conread position:
               
252-416
               

               
Cow position:
               
chr10:56828321-56828157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
252-417
               

               
Cow position:
               
chr10:24753143-24753300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
252-417
               

               
Cow position:
               
chr10:40420850-40420691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
252-417
               

               
Cow position:
               
chr10:46262184-46262348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
252-418
               

               
Cow position:
               
chr10:37508151-37507987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
252-419
               

               
Cow position:
               
chr10:2708868-2709034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
101, 143
               

               
Conread position:
               
252-419
               

               
Cow position:
               
chr10:30523066-30522898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
107, 83
               

               
Conread position:
               
252-419
               

               
Cow position:
               
chr10:30929887-30929719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
98, 16
               

               
Conread position:
               
252-419
               

               
Cow position:
               
chr10:42745914-42746076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
252-419
               

               
Cow position:
               
chr10:63883935-63884111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
252-420
               

               
Cow position:
               
chr10:44764499-44764324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 83
               

               
Conread position:
               
252-421
               

               
Cow position:
               
chr10:41626592-41626760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
102, 26
               

               
Conread position:
               
252-421
               

               
Cow position:
               
chr10:55122803-55122977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
103, 132
               

               
Conread position:
               
252-422
               

               
Cow position:
               
chr10:23576543-23576709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
252-422
               

               
Cow position:
               
chr10:42115356-42115524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
252-422
               

               
Cow position:
               
chr10:45965496-45965664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
252-422
               

               
Cow position:
               
chr10:69681107-69680937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr10:3275969-3276138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr10:4311169-4311331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr10:10137861-10138030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr10:16830390-16830214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
98, 89
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr10:17844763-17844935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr10:33915069-33914898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr10:34674014-34674184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr10:35862231-35862062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr10:36856135-36855957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr10:45295146-45294970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
115, 160
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr10:45658142-45658309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
252-425
               

               
Cow position:
               
chr10:21923524-21923345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
252-425
               

               
Cow position:
               
chr10:37174456-37174281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
102, 68
               

               
Conread position:
               
252-425
               

               
Cow position:
               
chr10:47182572-47182394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
106, 70
               

               
Conread position:
               
252-429
               

               
Cow position:
               
chr10:31527971-31528144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
173, 41
               

               
Conread position:
               
252-429
               

               
Cow position:
               
chr10:64140304-64140122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
104, 79
               

               
Conread position:
               
252-430
               

               
Cow position:
               
chr10:17836948-17837130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 156
               

               
Conread position:
               
252-430
               

               
Cow position:
               
chr10:31534730-31534915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
252-430
               

               
Cow position:
               
chr10:36400054-36399871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
252-430
               

               
Cow position:
               
chr10:36401089-36400906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
252-431
               

               
Cow position:
               
chr10:1423827-1424010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
252-431
               

               
Cow position:
               
chr10:4184192-4184381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
252-431
               

               
Cow position:
               
chr10:30787631-30787447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
102, 79
               

               
Conread position:
               
252-431
               

               
Cow position:
               
chr10:48353938-48353764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
96, 75
               

               
Conread position:
               
252-431
               

               
Cow position:
               
chr10:54548509-54548680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
117, 50
               

               
Conread position:
               
252-431
               

               
Cow position:
               
chr10:57786335-57786515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
252-432
               

               
Cow position:
               
chr10:37709020-37708847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
252-434
               

               
Cow position:
               
chr10:6436056-6436238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
252-435
               

               
Cow position:
               
chr10:10153006-10153185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
252-435
               

               
Cow position:
               
chr10:28843354-28843540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
112, 79
               

               
Conread position:
               
252-436
               

               
Cow position:
               
chr10:2974090-2973889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
252-436
               

               
Cow position:
               
chr10:5889766-5889576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 124
               

               
Conread position:
               
252-436
               

               
Cow position:
               
chr10:14093246-14093068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
105, 31
               

               
Conread position:
               
252-436
               

               
Cow position:
               
chr10:16986328-16986517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
111, 182
               

               
Conread position:
               
252-436
               

               
Cow position:
               
chr10:32649247-32649067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
106, 40
               

               
Conread position:
               
252-436
               

               
Cow position:
               
chr10:37014630-37014818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
106, 141
               

               
Conread position:
               
252-436
               

               
Cow position:
               
chr10:39140316-39140490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
252-436
               

               
Cow position:
               
chr10:43531263-43531450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
107, 65
               

               
Conread position:
               
252-436
               

               
Cow position:
               
chr10:45379008-45378819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
98, 177
               

               
Conread position:
               
252-436
               

               
Cow position:
               
chr10:59010139-59009955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
173, 126
               

               
Conread position:
               
252-436
               

               
Cow position:
               
chr10:60962415-60962616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 189
               

               
Conread position:
               
252-436
               

               
Cow position:
               
chr10:64042081-64042266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
103, 65
               

               
Conread position:
               
252-436
               

               
Cow position:
               
chr10:65071308-65071506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
252-437
               

               
Cow position:
               
chr10:47159211-47159387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
252-440
               

               
Cow position:
               
chr10:10751994-10751800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
252-441
               

               
Cow position:
               
chr10:64877714-64877519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
252-442
               

               
Cow position:
               
chr10:7383617-7383428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
252-442
               

               
Cow position:
               
chr10:9959212-9959406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
108, 79
               

               
Conread position:
               
252-442
               

               
Cow position:
               
chr10:19503287-19503092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
86, 182
               

               
Conread position:
               
252-442
               

               
Cow position:
               
chr10:24756408-24756596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
106, 149
               

               
Conread position:
               
252-442
               

               
Cow position:
               
chr10:64394075-64394268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
108, 177
               

               
Conread position:
               
252-443
               

               
Cow position:
               
chr10:14732625-14732809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
182, 16
               

               
Conread position:
               
252-443
               

               
Cow position:
               
chr10:35605046-35605231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
252-444
               

               
Cow position:
               
chr10:15868248-15868446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
252-444
               

               
Cow position:
               
chr10:22341574-22341764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
252-444
               

               
Cow position:
               
chr10:36531733-36531537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 75
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr10:1978675-1978482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
100, 173
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr10:2328185-2328381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr10:6489868-6490067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
95, 180
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr10:6718970-6719166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
102, 177
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr10:11060531-11060342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr10:28223210-28223405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
101, 31
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr10:33772444-33772639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 19
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr10:37765030-37765228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
111, 181
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr10:38944253-38944449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
115, 87
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr10:42637229-42637421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
112, 146
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr10:43442109-43441918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
133, 172
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr10:48377401-48377202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr10:50052080-50051879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr10:51804052-51803858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr10:61509947-61509758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
252-446
               

               
Cow position:
               
chr10:4109585-4109775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
173, 85
               

               
Conread position:
               
252-446
               

               
Cow position:
               
chr10:8853548-8853741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
105, 49
               

               
Conread position:
               
252-446
               

               
Cow position:
               
chr10:16598685-16598885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 90
               

               
Conread position:
               
252-446
               

               
Cow position:
               
chr10:31718387-31718190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
94, 176
               

               
Conread position:
               
252-446
               

               
Cow position:
               
chr10:37235556-37235357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 115
               

               
Conread position:
               
252-446
               

               
Cow position:
               
chr10:48814431-48814236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
108, 89
               

               
Conread position:
               
252-446
               

               
Cow position:
               
chr10:49846771-49846968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
104, 151
               

               
Conread position:
               
252-446
               

               
Cow position:
               
chr10:57059285-57059083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 179
               

               
Conread position:
               
253-436
               

               
Cow position:
               
chr10:30837039-30836850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
99, 177
               

               
Conread position:
               
253-436
               

               
Cow position:
               
chr10:60955518-60955331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
71, 176
               

               
Conread position:
               
253-445
               

               
Cow position:
               
chr10:31625956-31626153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
101, 180
               

               
Conread position:
               
253-446
               

               
Cow position:
               
chr10:63955955-63956149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
254-415
               

               
Cow position:
               
chr10:23071747-23071580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
254-432
               

               
Cow position:
               
chr10:58807745-58807571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
254-436
               

               
Cow position:
               
chr10:31005018-31004830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
98, 49
               

               
Conread position:
               
254-444
               

               
Cow position:
               
chr10:26829811-26829615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
102, 179
               

               
Conread position:
               
254-446
               

               
Cow position:
               
chr10:16944471-16944653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
255-356
               

               
Cow position:
               
chr10:25529192-25529090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
255-356
               

               
Cow position:
               
chr10:67581284-67581383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
255-392
               

               
Cow position:
               
chr10:35454941-35454803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
255-405
               

               
Cow position:
               
chr10:38942431-38942587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
255-408
               

               
Cow position:
               
chr10:66194305-66194147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
94, 129
               

               
Conread position:
               
255-409
               

               
Cow position:
               
chr10:15241294-15241135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
255-416
               

               
Cow position:
               
chr10:48620012-48619851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
255-417
               

               
Cow position:
               
chr10:21564748-21564913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
101, 50
               

               
Conread position:
               
255-422
               

               
Cow position:
               
chr10:24871164-24871340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
255-422
               

               
Cow position:
               
chr10:33185320-33185493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
255-423
               

               
Cow position:
               
chr10:18042179-18042352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
99, 150
               

               
Conread position:
               
255-423
               

               
Cow position:
               
chr10:45871514-45871688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
255-424
               

               
Cow position:
               
chr10:55319495-55319664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
255-430
               

               
Cow position:
               
chr10:29974176-29974014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
255-431
               

               
Cow position:
               
chr10:15383326-15383508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
255-431
               

               
Cow position:
               
chr10:24915719-24915541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
255-431
               

               
Cow position:
               
chr10:30888873-30888691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
255-431
               

               
Cow position:
               
chr10:57461356-57461531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
98, 83
               

               
Conread position:
               
255-431
               

               
Cow position:
               
chr10:64092762-64092580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
255-432
               

               
Cow position:
               
chr10:53365027-53365195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
255-432
               

               
Cow position:
               
chr10:54936131-54935949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
86, 76
               

               
Conread position:
               
255-435
               

               
Cow position:
               
chr10:24004467-24004282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 178
               

               
Conread position:
               
255-436
               

               
Cow position:
               
chr10:747469-747654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
101, 149
               

               
Conread position:
               
255-436
               

               
Cow position:
               
chr10:3286902-3286721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 174
               

               
Conread position:
               
255-436
               

               
Cow position:
               
chr10:5607950-5608138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 90
               

               
Conread position:
               
255-436
               

               
Cow position:
               
chr10:7309453-7309266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
255-436
               

               
Cow position:
               
chr10:19372337-19372152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
255-436
               

               
Cow position:
               
chr10:22980979-22980798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
92, 174
               

               
Conread position:
               
255-436
               

               
Cow position:
               
chr10:25968167-25968348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
99, 140
               

               
Conread position:
               
255-436
               

               
Cow position:
               
chr10:34607561-34607746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
88, 178
               

               
Conread position:
               
255-436
               

               
Cow position:
               
chr10:49942468-49942654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 179
               

               
Conread position:
               
255-436
               

               
Cow position:
               
chr10:65582445-65582629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
110, 10
               

               
Conread position:
               
255-439
               

               
Cow position:
               
chr10:52569591-52569780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
108, 179
               

               
Conread position:
               
255-440
               

               
Cow position:
               
chr10:8536809-8536620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 178
               

               
Conread position:
               
255-440
               

               
Cow position:
               
chr10:52072935-52072752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
87, 57
               

               
Conread position:
               
255-440
               

               
Cow position:
               
chr10:62919493-62919304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 76
               

               
Conread position:
               
255-443
               

               
Cow position:
               
chr10:29373375-29373187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
105, 172
               

               
Conread position:
               
255-443
               

               
Cow position:
               
chr10:39258495-39258302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
72, 56
               

               
Conread position:
               
255-443
               

               
Cow position:
               
chr10:39410806-39410991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 56
               

               
Conread position:
               
255-443
               

               
Cow position:
               
chr10:43487713-43487904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
255-443
               

               
Cow position:
               
chr10:53945003-53945197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
255-444
               

               
Cow position:
               
chr10:1698745-1698553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 178
               

               
Conread position:
               
255-444
               

               
Cow position:
               
chr10:10219638-10219838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr10:9656523-9656332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
179, 172
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr10:11282169-11281969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 182
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr10:13368352-13368548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
110, 172
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr10:16645187-16644996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
101, 47
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr10:22774793-22774603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
43, 174
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr10:27716841-27716646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 178
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr10:32492050-32492247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 180
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr10:34603645-34603452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
103, 144
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr10:41408274-41408458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
182, 85
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr10:43918250-43918443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr10:46318976-46319171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
105, 84
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr10:46829865-46830063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr10:46876037-46876231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
108, 178
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr10:51283984-51284182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr10:52896045-52895848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr10:61511180-61511375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
108, 171
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr10:63675236-63675039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
255-446
               

               
Cow position:
               
chr10:8161503-8161697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
105, 62
               

               
Conread position:
               
255-446
               

               
Cow position:
               
chr10:21528787-21528984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
97, 152
               

               
Conread position:
               
255-446
               

               
Cow position:
               
chr10:21546161-21546358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
97, 152
               

               
Conread position:
               
255-446
               

               
Cow position:
               
chr10:24096373-24096174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
99, 182
               

               
Conread position:
               
255-446
               

               
Cow position:
               
chr10:38370455-38370259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
103, 76
               

               
Conread position:
               
255-446
               

               
Cow position:
               
chr10:52881619-52881424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
93, 150
               

               
Conread position:
               
255-446
               

               
Cow position:
               
chr10:58638013-58638203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
174, 76
               

               
Conread position:
               
256-406
               

               
Cow position:
               
chr10:46237106-46236956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
94, 9
               

               
Conread position:
               
256-423
               

               
Cow position:
               
chr10:24971326-24971161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
256-423
               

               
Cow position:
               
chr10:34705277-34705449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
256-431
               

               
Cow position:
               
chr10:20485559-20485382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
256-436
               

               
Cow position:
               
chr10:23151618-23151797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
256-436
               

               
Cow position:
               
chr10:46849864-46850049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
98, 177
               

               
Conread position:
               
256-443
               

               
Cow position:
               
chr10:26631409-26631593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
137, 38
               

               
Conread position:
               
256-443
               

               
Cow position:
               
chr10:46934781-46934589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 178
               

               
Conread position:
               
256-443
               

               
Cow position:
               
chr10:63276394-63276578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
256-444
               

               
Cow position:
               
chr10:8411990-8412175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 80
               

               
Conread position:
               
256-445
               

               
Cow position:
               
chr10:24312886-24312701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
256-445
               

               
Cow position:
               
chr10:45337680-45337875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
256-445
               

               
Cow position:
               
chr10:69049046-69048852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
104, 178
               

               
Conread position:
               
257-419
               

               
Cow position:
               
chr10:39124134-39124301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
257-423
               

               
Cow position:
               
chr10:6384532-6384695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
257-432
               

               
Cow position:
               
chr10:40163932-40163755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
257-439
               

               
Cow position:
               
chr10:59417234-59417052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
79, 104
               

               
Conread position:
               
257-445
               

               
Cow position:
               
chr10:31466748-31466931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
257-445
               

               
Cow position:
               
chr10:59424600-59424793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 145
               

               
Conread position:
               
258-422
               

               
Cow position:
               
chr10:17073362-17073198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
258-422
               

               
Cow position:
               
chr10:19679100-19679274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
258-423
               

               
Cow position:
               
chr10:5784252-5784082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
96, 65
               

               
Conread position:
               
258-423
               

               
Cow position:
               
chr10:10148651-10148820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
258-426
               

               
Cow position:
               
chr10:52695724-52695554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
258-428
               

               
Cow position:
               
chr10:11112625-11112797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
46, 161
               

               
Conread position:
               
258-431
               

               
Cow position:
               
chr10:37415792-37415960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
258-431
               

               
Cow position:
               
chr10:55069211-55069384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
100, 55
               

               
Conread position:
               
258-445
               

               
Cow position:
               
chr10:34646444-34646267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
258-445
               

               
Cow position:
               
chr10:34661321-34661142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
113, 30
               

               
Conread position:
               
258-445
               

               
Cow position:
               
chr10:61171260-61171451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
91, 147
               

               
Conread position:
               
258-446
               

               
Cow position:
               
chr10:38995231-38995425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 172
               

               
Conread position:
               
259-445
               

               
Cow position:
               
chr10:62353462-62353645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
74, 165
               

               
Conread position:
               
262-391
               

               
Cow position:
               
chr10:15570215-15570347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
264-444
               

               
Cow position:
               
chr10:19402917-19403103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
92, 171
               

               
Conread position:
               
264-444
               

               
Cow position:
               
chr10:53766350-53766534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
99, 165
               

               
Conread position:
               
264-445
               

               
Cow position:
               
chr10:25832-26012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 135
               

               
Conread position:
               
265-356
               

               
Cow position:
               
chr10:33462376-33462285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
265-391
               

               
Cow position:
               
chr10:23478920-23478793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
265-392
               

               
Cow position:
               
chr10:13197822-13197685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
265-409
               

               
Cow position:
               
chr10:29102336-29102186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
99, 77
               

               
Conread position:
               
265-416
               

               
Cow position:
               
chr10:8281273-8281430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
265-416
               

               
Cow position:
               
chr10:49382949-49382800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
265-417
               

               
Cow position:
               
chr10:17797716-17797554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
265-423
               

               
Cow position:
               
chr10:15249033-15248869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 60
               

               
Conread position:
               
265-423
               

               
Cow position:
               
chr10:24861320-24861484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 138
               

               
Conread position:
               
265-423
               

               
Cow position:
               
chr10:26670899-26671053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
265-423
               

               
Cow position:
               
chr10:27544462-27544622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
265-423
               

               
Cow position:
               
chr10:30801328-30801491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
95, 159
               

               
Conread position:
               
265-425
               

               
Cow position:
               
chr10:33195051-33195217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
265-430
               

               
Cow position:
               
chr10:22972996-22972827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
265-431
               

               
Cow position:
               
chr10:58149160-58148993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
84, 158
               

               
Conread position:
               
265-432
               

               
Cow position:
               
chr10:17990951-17991109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
265-436
               

               
Cow position:
               
chr10:8870824-8870998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
91, 160
               

               
Conread position:
               
265-436
               

               
Cow position:
               
chr10:35858687-35858847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
265-436
               

               
Cow position:
               
chr10:43201339-43201164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
265-436
               

               
Cow position:
               
chr10:51306350-51306520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
155, 73
               

               
Conread position:
               
265-436
               

               
Cow position:
               
chr10:61588251-61588075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
93, 168
               

               
Conread position:
               
265-436
               

               
Cow position:
               
chr10:66365304-66365486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
63, 174
               

               
Conread position:
               
265-438
               

               
Cow position:
               
chr10:5014290-5014128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
265-441
               

               
Cow position:
               
chr10:33881774-33881592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
265-442
               

               
Cow position:
               
chr10:10616998-10617181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
265-442
               

               
Cow position:
               
chr10:20291264-20291080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 171
               

               
Conread position:
               
265-443
               

               
Cow position:
               
chr10:15602172-15601990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
93, 164
               

               
Conread position:
               
265-445
               

               
Cow position:
               
chr10:12960291-12960106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 135
               

               
Conread position:
               
265-445
               

               
Cow position:
               
chr10:19238872-19238689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 163
               

               
Conread position:
               
265-445
               

               
Cow position:
               
chr10:23379143-23379320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
265-445
               

               
Cow position:
               
chr10:35978938-35979123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
91, 169
               

               
Conread position:
               
265-445
               

               
Cow position:
               
chr10:46043003-46043187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
91, 37
               

               
Conread position:
               
265-445
               

               
Cow position:
               
chr10:53698416-53698600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 168
               

               
Conread position:
               
265-445
               

               
Cow position:
               
chr10:63484650-63484828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
266-425
               

               
Cow position:
               
chr10:10575325-10575481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
266-428
               

               
Cow position:
               
chr10:54776556-54776721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
98, 138
               

               
Conread position:
               
267-360
               

               
Cow position:
               
chr10:58736954-58736861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
267-390
               

               
Cow position:
               
chr10:33084429-33084299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
267-391
               

               
Cow position:
               
chr10:47543087-47543217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
267-409
               

               
Cow position:
               
chr10:6268691-6268833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
267-409
               

               
Cow position:
               
chr10:14188599-14188456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
267-415
               

               
Cow position:
               
chr10:21082392-21082534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
267-417
               

               
Cow position:
               
chr10:58044117-58043963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
267-419
               

               
Cow position:
               
chr10:54848789-54848943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
267-423
               

               
Cow position:
               
chr10:38195965-38195804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
89, 53
               

               
Conread position:
               
267-423
               

               
Cow position:
               
chr10:39387465-39387618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
267-423
               

               
Cow position:
               
chr10:45623771-45623619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
267-423
               

               
Cow position:
               
chr10:50049916-50050068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
267-423
               

               
Cow position:
               
chr10:54504616-54504773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
85, 70
               

               
Conread position:
               
267-423
               

               
Cow position:
               
chr10:55382326-55382487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
91, 109
               

               
Conread position:
               
267-423
               

               
Cow position:
               
chr10:68911129-68910974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
267-425
               

               
Cow position:
               
chr10:23912501-23912340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 135
               

               
Conread position:
               
267-432
               

               
Cow position:
               
chr10:64285783-64285622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
267-433
               

               
Cow position:
               
chr10:30261595-30261426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 135
               

               
Conread position:
               
267-435
               

               
Cow position:
               
chr10:48316936-48316763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
91, 166
               

               
Conread position:
               
267-436
               

               
Cow position:
               
chr10:2462478-2462296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
41, 146
               

               
Conread position:
               
267-436
               

               
Cow position:
               
chr10:3985901-3986073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
267-436
               

               
Cow position:
               
chr10:17518836-17518664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
91, 28
               

               
Conread position:
               
267-436
               

               
Cow position:
               
chr10:38205699-38205532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
158, 63
               

               
Conread position:
               
267-437
               

               
Cow position:
               
chr10:50332607-50332776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
86, 14
               

               
Conread position:
               
267-442
               

               
Cow position:
               
chr10:7786781-7786961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
88, 167
               

               
Conread position:
               
267-443
               

               
Cow position:
               
chr10:60354035-60353865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
267-443
               

               
Cow position:
               
chr10:62454358-62454176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
94, 130
               

               
Conread position:
               
267-445
               

               
Cow position:
               
chr10:7089358-7089535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
158, 83
               

               
Conread position:
               
267-445
               

               
Cow position:
               
chr10:17568089-17567908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
155, 6
               

               
Conread position:
               
267-445
               

               
Cow position:
               
chr10:56475480-56475644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
267-446
               

               
Cow position:
               
chr10:9797899-9797720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
87, 80
               

               
Conread position:
               
267-446
               

               
Cow position:
               
chr10:16641920-16641739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 160
               

               
Conread position:
               
268-377
               

               
Cow position:
               
chr10:5020369-5020261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
268-391
               

               
Cow position:
               
chr10:15871860-15871743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
268-396
               

               
Cow position:
               
chr10:44122114-44122248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
268-408
               

               
Cow position:
               
chr10:22593934-22594078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
268-408
               

               
Cow position:
               
chr10:38799850-38799996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
268-415
               

               
Cow position:
               
chr10:17691225-17691075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 133
               

               
Conread position:
               
268-415
               

               
Cow position:
               
chr10:51727411-51727264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
268-417
               

               
Cow position:
               
chr10:21422147-21422001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 43
               

               
Conread position:
               
268-419
               

               
Cow position:
               
chr10:18751463-18751310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
268-419
               

               
Cow position:
               
chr10:36864380-36864525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
268-422
               

               
Cow position:
               
chr10:58651177-58651024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
93, 131
               

               
Conread position:
               
268-423
               

               
Cow position:
               
chr10:1417609-1417762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
268-423
               

               
Cow position:
               
chr10:5543237-5543079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 10
               

               
Conread position:
               
268-423
               

               
Cow position:
               
chr10:19709390-19709554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
268-423
               

               
Cow position:
               
chr10:27136676-27136515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
268-423
               

               
Cow position:
               
chr10:47559542-47559390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
268-423
               

               
Cow position:
               
chr10:50533856-50533708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
95, 114
               

               
Conread position:
               
268-423
               

               
Cow position:
               
chr10:60697614-60697459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 62
               

               
Conread position:
               
268-424
               

               
Cow position:
               
chr10:35868006-35867846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 57
               

               
Conread position:
               
268-425
               

               
Cow position:
               
chr10:443593-443744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
268-430
               

               
Cow position:
               
chr10:40933770-40933940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 154
               

               
Conread position:
               
268-431
               

               
Cow position:
               
chr10:4329985-4329815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
268-431
               

               
Cow position:
               
chr10:13765152-13764986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
268-431
               

               
Cow position:
               
chr10:28571411-28571580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
268-431
               

               
Cow position:
               
chr10:29166285-29166460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
268-431
               

               
Cow position:
               
chr10:49029664-49029826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
268-431
               

               
Cow position:
               
chr10:58653891-58653735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
268-432
               

               
Cow position:
               
chr10:32080284-32080446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
268-432
               

               
Cow position:
               
chr10:35731515-35731349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
268-436
               

               
Cow position:
               
chr10:11463654-11463478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
72, 168
               

               
Conread position:
               
268-436
               

               
Cow position:
               
chr10:27178505-27178668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
268-436
               

               
Cow position:
               
chr10:34655096-34654929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
79, 96
               

               
Conread position:
               
268-436
               

               
Cow position:
               
chr10:42312916-42313089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 159
               

               
Conread position:
               
268-436
               

               
Cow position:
               
chr10:69934768-69934601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
95, 131
               

               
Conread position:
               
268-437
               

               
Cow position:
               
chr10:19394561-19394381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
268-437
               

               
Cow position:
               
chr10:44513250-44513077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
268-437
               

               
Cow position:
               
chr10:49862479-49862647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
268-440
               

               
Cow position:
               
chr10:20447933-20448104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
268-440
               

               
Cow position:
               
chr10:33573234-33573060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
268-442
               

               
Cow position:
               
chr10:52125672-52125504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
268-443
               

               
Cow position:
               
chr10:33665855-33666031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 95
               

               
Conread position:
               
268-444
               

               
Cow position:
               
chr10:38241091-38241268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
94, 159
               

               
Conread position:
               
268-444
               

               
Cow position:
               
chr10:57095188-57095017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
91, 55
               

               
Conread position:
               
268-445
               

               
Cow position:
               
chr10:15817781-15817610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
268-445
               

               
Cow position:
               
chr10:19098850-19099022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
19, 60
               

               
Conread position:
               
268-445
               

               
Cow position:
               
chr10:32336032-32336212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 10
               

               
Conread position:
               
268-445
               

               
Cow position:
               
chr10:34903488-34903662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
268-445
               

               
Cow position:
               
chr10:36490032-36490209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
103, 160
               

               
Conread position:
               
268-445
               

               
Cow position:
               
chr10:40738006-40738179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
268-445
               

               
Cow position:
               
chr10:45371068-45371246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 161
               

               
Conread position:
               
268-445
               

               
Cow position:
               
chr10:47429838-47430014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
89, 71
               

               
Conread position:
               
268-445
               

               
Cow position:
               
chr10:52152807-52152988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
80, 118
               

               
Conread position:
               
268-446
               

               
Cow position:
               
chr10:6242500-6242334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
268-446
               

               
Cow position:
               
chr10:43460040-43459864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
96, 35
               

               
Conread position:
               
268-446
               

               
Cow position:
               
chr10:44730466-44730283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 158
               

               
Conread position:
               
268-446
               

               
Cow position:
               
chr10:61922131-61921953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 158
               

               
Conread position:
               
269-396
               

               
Cow position:
               
chr10:24808505-24808635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
269-415
               

               
Cow position:
               
chr10:24276712-24276568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
269-417
               

               
Cow position:
               
chr10:28194346-28194198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
77, 58
               

               
Conread position:
               
269-430
               

               
Cow position:
               
chr10:52296507-52296673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
269-445
               

               
Cow position:
               
chr10:58066176-58065997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 132
               

               
Conread position:
               
269-446
               

               
Cow position:
               
chr10:69937438-69937252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
19, 169
               

               
Conread position:
               
270-439
               

               
Cow position:
               
chr10:20553199-20553366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
155, 125
               

               
Conread position:
               
270-441
               

               
Cow position:
               
chr10:17077726-17077556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
86, 139
               

               
Conread position:
               
270-442
               

               
Cow position:
               
chr10:67379307-67379484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
86, 163
               

               
Conread position:
               
270-445
               

               
Cow position:
               
chr10:10027585-10027763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
76, 61
               

               
Conread position:
               
270-445
               

               
Cow position:
               
chr10:24560973-24560798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 57
               

               
Conread position:
               
270-446
               

               
Cow position:
               
chr10:40998871-40999050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
270-446
               

               
Cow position:
               
chr10:63940785-63940967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
271-416
               

               
Cow position:
               
chr10:34552585-34552439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
271-421
               

               
Cow position:
               
chr10:18155335-18155490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
86, 10
               

               
Conread position:
               
271-423
               

               
Cow position:
               
chr10:37258853-37258695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
271-433
               

               
Cow position:
               
chr10:22390612-22390780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
271-445
               

               
Cow position:
               
chr10:18011192-18011372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 163
               

               
Conread position:
               
271-446
               

               
Cow position:
               
chr10:18849538-18849714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
76, 155
               

               
Conread position:
               
272-419
               

               
Cow position:
               
chr10:10985487-10985346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
272-423
               

               
Cow position:
               
chr10:15298485-15298338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
92, 29
               

               
Conread position:
               
272-423
               

               
Cow position:
               
chr10:38430548-38430397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
272-425
               

               
Cow position:
               
chr10:46327707-46327862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
272-430
               

               
Cow position:
               
chr10:25475549-25475709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
272-431
               

               
Cow position:
               
chr10:55733593-55733434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 151
               

               
Conread position:
               
272-441
               

               
Cow position:
               
chr10:14817143-14816975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 29
               

               
Conread position:
               
272-444
               

               
Cow position:
               
chr10:7304582-7304754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
92, 157
               

               
Conread position:
               
272-445
               

               
Cow position:
               
chr10:41676393-41676226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
273-441
               

               
Cow position:
               
chr10:56996691-56996524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
273-445
               

               
Cow position:
               
chr10:26750372-26750546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 71
               

               
Conread position:
               
273-445
               

               
Cow position:
               
chr10:40164348-40164186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
157, 13
               

               
Conread position:
               
274-425
               

               
Cow position:
               
chr10:1976299-1976146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
76, 139
               

               
Conread position:
               
275-423
               

               
Cow position:
               
chr10:51289269-51289414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
275-423
               

               
Cow position:
               
chr10:67243675-67243527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 127
               

               
Conread position:
               
275-438
               

               
Cow position:
               
chr10:56136521-56136689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
89, 158
               

               
Conread position:
               
275-438
               

               
Cow position:
               
chr10:61146564-61146732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
74, 125
               

               
Conread position:
               
276-444
               

               
Cow position:
               
chr10:25142516-25142349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
276-445
               

               
Cow position:
               
chr10:14947275-14947443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
83, 55
               

               
Conread position:
               
276-446
               

               
Cow position:
               
chr10:15569903-15570079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
276-446
               

               
Cow position:
               
chr10:25342610-25342772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
276-446
               

               
Cow position:
               
chr10:41115925-41116092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
277-445
               

               
Cow position:
               
chr10:8891268-8891097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
75, 161
               

               
Conread position:
               
277-445
               

               
Cow position:
               
chr10:35017754-35017929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 159
               

               
Conread position:
               
278-423
               

               
Cow position:
               
chr10:2613391-2613536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 8
               

               
Conread position:
               
278-434
               

               
Cow position:
               
chr10:16093232-16093391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
278-436
               

               
Cow position:
               
chr10:19191776-19191937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
278-445
               

               
Cow position:
               
chr10:54962694-54962528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
47, 129
               

               
Conread position:
               
279-436
               

               
Cow position:
               
chr10:30451862-30452013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
279-443
               

               
Cow position:
               
chr10:10104804-10104967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
79, 68
               

               
Conread position:
               
279-445
               

               
Cow position:
               
chr10:25149917-25150077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
280-431
               

               
Cow position:
               
chr10:24035996-24035841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
280-443
               

               
Cow position:
               
chr10:22961148-22960992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 56
               

               
Conread position:
               
280-445
               

               
Cow position:
               
chr10:56303595-56303764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
281-419
               

               
Cow position:
               
chr10:48462318-48462181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
282-417
               

               
Cow position:
               
chr10:4278301-4278167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
25, 85
               

               
Conread position:
               
283-431
               

               
Cow position:
               
chr10:1255429-1255275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
66, 31
               

               
Conread position:
               
283-436
               

               
Cow position:
               
chr10:50183025-50182870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
283-444
               

               
Cow position:
               
chr10:67691913-67692071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
142, 80
               

               
Conread position:
               
283-445
               

               
Cow position:
               
chr10:35249117-35248950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 147
               

               
Conread position:
               
283-446
               

               
Cow position:
               
chr10:1996643-1996485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
285-417
               

               
Cow position:
               
chr10:24863078-24862939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
286-431
               

               
Cow position:
               
chr10:847205-847050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
286-431
               

               
Cow position:
               
chr10:55235584-55235433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
286-442
               

               
Cow position:
               
chr10:20372105-20371944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 148
               

               
Conread position:
               
287-432
               

               
Cow position:
               
chr10:31000199-31000060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
289-440
               

               
Cow position:
               
chr10:14396623-14396473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
65, 52
               

               
Conread position:
               
289-440
               

               
Cow position:
               
chr10:28721809-28721967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
289-444
               

               
Cow position:
               
chr10:36945767-36945606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 11
               

               
Conread position:
               
289-445
               

               
Cow position:
               
chr10:33694408-33694560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
289-446
               

               
Cow position:
               
chr10:37534623-37534781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
33, 141
               

               
Conread position:
               
290-423
               

               
Cow position:
               
chr10:24422141-24422002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
290-430
               

               
Cow position:
               
chr10:66940809-66940662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 137
               

               
Conread position:
               
290-445
               

               
Cow position:
               
chr10:23493652-23493500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
290-446
               

               
Cow position:
               
chr10:14622413-14622575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 145
               

               
Conread position:
               
291-444
               

               
Cow position:
               
chr10:27262440-27262283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 50
               

               
Conread position:
               
296-440
               

               
Cow position:
               
chr10:35715549-35715401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
56, 137
               

               
Conread position:
               
299-436
               

               
Cow position:
               
chr10:35820294-35820156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
64, 130
               

               
Conread position:
               
301-436
               

               
Cow position:
               
chr10:17983926-17984066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
59, 133
               

               
Conread position:
               
301-436
               

               
Cow position:
               
chr10:49686790-49686924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
301-445
               

               
Cow position:
               
chr10:51690928-51691070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 96
               

               
Conread position:
               
302-445
               

               
Cow position:
               
chr10:43909804-43909655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
304-436
               

               
Cow position:
               
chr10:13363831-13363694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 130
               

               
Conread position:
               
304-444
               

               
Cow position:
               
chr10:33122535-33122390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 130
               

               
Conread position:
               
304-445
               

               
Cow position:
               
chr10:69973910-69973763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
305-444
               

               
Cow position:
               
chr10:35717226-35717082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
59, 129
               

               
Conread position:
               
312-436
               

               
Cow position:
               
chr10:30923238-30923117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
313-419
               

               
Cow position:
               
chr10:55194697-55194590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 88
               

               
Conread position:
               
322-436
               

               
Cow position:
               
chr10:38156640-38156525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
328-446
               

               
Cow position:
               
chr10:24072216-24072094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
102, 0
               
Show alignments to all cow chromosomes.