• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rssp21_g15.y1
        

               
Conread position:
               
221-445
               

               
Cow position:
               
chr24:26695984-26695754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 213
               

               
Conread position:
               
222-436
               

               
Cow position:
               
chr24:11692466-11692688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
22, 112
               

               
Conread position:
               
224-436
               

               
Cow position:
               
chr24:27220121-27219905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
140, 41
               

               
Conread position:
               
241-445
               

               
Cow position:
               
chr24:17407375-17407583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 18
               

               
Conread position:
               
244-445
               

               
Cow position:
               
chr24:6515443-6515239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
246-446
               

               
Cow position:
               
chr24:13888693-13888897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
114, 19
               

               
Conread position:
               
248-436
               

               
Cow position:
               
chr24:18541458-18541273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
177, 69
               

               
Conread position:
               
248-443
               

               
Cow position:
               
chr24:7745260-7745066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
248-444
               

               
Cow position:
               
chr24:12200416-12200218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
110, 20
               

               
Conread position:
               
248-444
               

               
Cow position:
               
chr24:36711187-36711386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
113, 17
               

               
Conread position:
               
248-445
               

               
Cow position:
               
chr24:14550788-14550983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
102, 12
               

               
Conread position:
               
248-445
               

               
Cow position:
               
chr24:44776184-44775983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
103, 17
               

               
Conread position:
               
248-445
               

               
Cow position:
               
chr24:44896031-44896233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
109, 17
               

               
Conread position:
               
251-423
               

               
Cow position:
               
chr24:2261662-2261840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
251-436
               

               
Cow position:
               
chr24:10242788-10242602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
104, 150
               

               
Conread position:
               
251-444
               

               
Cow position:
               
chr24:33098478-33098282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
105, 180
               

               
Conread position:
               
251-445
               

               
Cow position:
               
chr24:19768861-19769061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
108, 179
               

               
Conread position:
               
252-356
               

               
Cow position:
               
chr24:256022-256126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
252-356
               

               
Cow position:
               
chr24:7113218-7113322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
252-389
               

               
Cow position:
               
chr24:31359317-31359454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
95, 57
               

               
Conread position:
               
252-401
               

               
Cow position:
               
chr24:16645324-16645170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
252-402
               

               
Cow position:
               
chr24:28990557-28990711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
95, 84
               

               
Conread position:
               
252-415
               

               
Cow position:
               
chr24:6008174-6008008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
252-416
               

               
Cow position:
               
chr24:23556342-23556174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
252-419
               

               
Cow position:
               
chr24:18357056-18356891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 147
               

               
Conread position:
               
252-422
               

               
Cow position:
               
chr24:21834963-21834794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr24:7757768-7757939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr24:10300072-10300249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
107, 148
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr24:18874825-18874650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
106, 75
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr24:27553091-27553270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
103, 51
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr24:27844532-27844363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr24:32979172-32979005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr24:33944397-33944576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr24:42984387-42984565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
252-425
               

               
Cow position:
               
chr24:39904008-39903835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
167, 43
               

               
Conread position:
               
252-427
               

               
Cow position:
               
chr24:399106-398928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
252-429
               

               
Cow position:
               
chr24:25142605-25142793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
252-429
               

               
Cow position:
               
chr24:43499654-43499833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
69, 156
               

               
Conread position:
               
252-430
               

               
Cow position:
               
chr24:2992884-2992703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
100, 14
               

               
Conread position:
               
252-431
               

               
Cow position:
               
chr24:3165814-3165997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
91, 159
               

               
Conread position:
               
252-431
               

               
Cow position:
               
chr24:17104574-17104394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 149
               

               
Conread position:
               
252-431
               

               
Cow position:
               
chr24:27713409-27713232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
252-431
               

               
Cow position:
               
chr24:43832524-43832700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
75, 100
               

               
Conread position:
               
252-433
               

               
Cow position:
               
chr24:25194261-25194446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
107, 34
               

               
Conread position:
               
252-435
               

               
Cow position:
               
chr24:28600439-28600256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 100
               

               
Conread position:
               
252-436
               

               
Cow position:
               
chr24:161999-162188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
106, 175
               

               
Conread position:
               
252-436
               

               
Cow position:
               
chr24:5152519-5152709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
252-436
               

               
Cow position:
               
chr24:14551462-14551643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 29
               

               
Conread position:
               
252-436
               

               
Cow position:
               
chr24:19000043-19000225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 98
               

               
Conread position:
               
252-436
               

               
Cow position:
               
chr24:22647345-22647153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
98, 31
               

               
Conread position:
               
252-436
               

               
Cow position:
               
chr24:25971078-25970901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
252-436
               

               
Cow position:
               
chr24:30229469-30229655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
62, 173
               

               
Conread position:
               
252-438
               

               
Cow position:
               
chr24:27906434-27906622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
34, 75
               

               
Conread position:
               
252-444
               

               
Cow position:
               
chr24:18755753-18755947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 177
               

               
Conread position:
               
252-444
               

               
Cow position:
               
chr24:19800843-19801028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
252-444
               

               
Cow position:
               
chr24:20801350-20801157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
106, 89
               

               
Conread position:
               
252-444
               

               
Cow position:
               
chr24:26569453-26569650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
252-444
               

               
Cow position:
               
chr24:28700048-28700234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
252-444
               

               
Cow position:
               
chr24:29586996-29587192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
102, 85
               

               
Conread position:
               
252-444
               

               
Cow position:
               
chr24:41980663-41980473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr24:352610-352407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
99, 34
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr24:3412679-3412873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
106, 83
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr24:10289338-10289145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
11, 80
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr24:13626279-13626476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 177
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr24:30483952-30483754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 183
               

               
Conread position:
               
252-446
               

               
Cow position:
               
chr24:11921915-11921720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
105, 177
               

               
Conread position:
               
252-446
               

               
Cow position:
               
chr24:16640905-16641101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
21, 178
               

               
Conread position:
               
252-446
               

               
Cow position:
               
chr24:19535260-19535059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
253-415
               

               
Cow position:
               
chr24:17060216-17060056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
253-435
               

               
Cow position:
               
chr24:26113375-26113561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
103, 12
               

               
Conread position:
               
254-423
               

               
Cow position:
               
chr24:16509976-16510141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
254-430
               

               
Cow position:
               
chr24:263280-263461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
102, 77
               

               
Conread position:
               
254-436
               

               
Cow position:
               
chr24:250540-250353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
97, 180
               

               
Conread position:
               
254-442
               

               
Cow position:
               
chr24:11028690-11028499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
255-409
               

               
Cow position:
               
chr24:28342355-28342518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
255-415
               

               
Cow position:
               
chr24:35631976-35632143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 79
               

               
Conread position:
               
255-416
               

               
Cow position:
               
chr24:13849163-13849327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 83
               

               
Conread position:
               
255-416
               

               
Cow position:
               
chr24:19637582-19637749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
255-416
               

               
Cow position:
               
chr24:41244510-41244674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 126
               

               
Conread position:
               
255-417
               

               
Cow position:
               
chr24:32891045-32890884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
255-419
               

               
Cow position:
               
chr24:32230507-32230338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
92, 117
               

               
Conread position:
               
255-421
               

               
Cow position:
               
chr24:11036836-11036669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
255-422
               

               
Cow position:
               
chr24:4724967-4725128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
255-422
               

               
Cow position:
               
chr24:25320984-25321154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
101, 76
               

               
Conread position:
               
255-423
               

               
Cow position:
               
chr24:28035599-28035766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
255-430
               

               
Cow position:
               
chr24:15353441-15353621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 76
               

               
Conread position:
               
255-430
               

               
Cow position:
               
chr24:19793385-19793201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
255-435
               

               
Cow position:
               
chr24:44987376-44987190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
255-436
               

               
Cow position:
               
chr24:25201282-25201469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
105, 179
               

               
Conread position:
               
255-436
               

               
Cow position:
               
chr24:25263740-25263550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 182
               

               
Conread position:
               
255-436
               

               
Cow position:
               
chr24:25756301-25756116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
69, 178
               

               
Conread position:
               
255-436
               

               
Cow position:
               
chr24:27810157-27810333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
170, 10
               

               
Conread position:
               
255-436
               

               
Cow position:
               
chr24:28775559-28775374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
87, 177
               

               
Conread position:
               
255-436
               

               
Cow position:
               
chr24:37252156-37252339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
72, 176
               

               
Conread position:
               
255-436
               

               
Cow position:
               
chr24:41604630-41604444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 178
               

               
Conread position:
               
255-438
               

               
Cow position:
               
chr24:36286568-36286752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
87, 168
               

               
Conread position:
               
255-440
               

               
Cow position:
               
chr24:7914005-7914195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
101, 179
               

               
Conread position:
               
255-440
               

               
Cow position:
               
chr24:21715352-21715163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
98, 167
               

               
Conread position:
               
255-442
               

               
Cow position:
               
chr24:19730778-19730970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
255-442
               

               
Cow position:
               
chr24:23863630-23863437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
255-443
               

               
Cow position:
               
chr24:15557343-15557154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
120, 108
               

               
Conread position:
               
255-443
               

               
Cow position:
               
chr24:17689612-17689422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
95, 71
               

               
Conread position:
               
255-443
               

               
Cow position:
               
chr24:18730343-18730535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
99, 179
               

               
Conread position:
               
255-443
               

               
Cow position:
               
chr24:22114725-22114919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
255-443
               

               
Cow position:
               
chr24:34595730-34595537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
99, 179
               

               
Conread position:
               
255-443
               

               
Cow position:
               
chr24:35650169-35649978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
255-444
               

               
Cow position:
               
chr24:3542298-3542493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
255-444
               

               
Cow position:
               
chr24:12120895-12121089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
109, 178
               

               
Conread position:
               
255-444
               

               
Cow position:
               
chr24:19028847-19029030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
255-444
               

               
Cow position:
               
chr24:24165540-24165735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
86, 180
               

               
Conread position:
               
255-444
               

               
Cow position:
               
chr24:34079340-34079148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
255-444
               

               
Cow position:
               
chr24:42862623-42862816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr24:3176663-3176467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr24:3656367-3656172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
99, 150
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr24:13586993-13586800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr24:15668418-15668615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr24:18344062-18344259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr24:18884395-18884590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
105, 127
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr24:19598904-19599104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 183
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr24:22419959-22420154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
109, 158
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr24:22567102-22567297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr24:23575163-23574968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
101, 179
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr24:27203459-27203646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
94, 76
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr24:27448643-27448838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 78
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr24:36303318-36303119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
77, 184
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr24:37267661-37267856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
99, 178
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr24:39143611-39143803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 47
               

               
Conread position:
               
256-416
               

               
Cow position:
               
chr24:17294197-17294032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
256-416
               

               
Cow position:
               
chr24:27270926-27271092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
256-419
               

               
Cow position:
               
chr24:17752112-17751942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
86, 75
               

               
Conread position:
               
256-422
               

               
Cow position:
               
chr24:24532173-24532340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
256-432
               

               
Cow position:
               
chr24:390103-390279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
256-435
               

               
Cow position:
               
chr24:4822237-4822421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
104, 177
               

               
Conread position:
               
256-436
               

               
Cow position:
               
chr24:42903809-42903994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 39
               

               
Conread position:
               
256-444
               

               
Cow position:
               
chr24:38814967-38815166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
256-445
               

               
Cow position:
               
chr24:39760024-39760219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
256-446
               

               
Cow position:
               
chr24:4635168-4634971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
256-446
               

               
Cow position:
               
chr24:39523449-39523257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
257-437
               

               
Cow position:
               
chr24:2402367-2402193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
98, 74
               

               
Conread position:
               
257-445
               

               
Cow position:
               
chr24:44104170-44103977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
104, 177
               

               
Conread position:
               
258-414
               

               
Cow position:
               
chr24:31816580-31816736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
99, 142
               

               
Conread position:
               
258-414
               

               
Cow position:
               
chr24:41916261-41916418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
106, 84
               

               
Conread position:
               
258-423
               

               
Cow position:
               
chr24:24491015-24490856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
258-431
               

               
Cow position:
               
chr24:30314024-30313851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
69, 53
               

               
Conread position:
               
258-436
               

               
Cow position:
               
chr24:28510799-28510975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
96, 43
               

               
Conread position:
               
258-442
               

               
Cow position:
               
chr24:37974979-37974797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
136, 164
               

               
Conread position:
               
258-445
               

               
Cow position:
               
chr24:37651727-37651912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
138, 93
               

               
Conread position:
               
262-444
               

               
Cow position:
               
chr24:3148230-3148046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
54, 170
               

               
Conread position:
               
264-418
               

               
Cow position:
               
chr24:41566091-41565935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
89, 39
               

               
Conread position:
               
264-433
               

               
Cow position:
               
chr24:23667114-23666945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
264-440
               

               
Cow position:
               
chr24:15473533-15473717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
265-361
               

               
Cow position:
               
chr24:21623231-21623327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
265-403
               

               
Cow position:
               
chr24:11736062-11735920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 76
               

               
Conread position:
               
265-409
               

               
Cow position:
               
chr24:44040996-44040855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
265-415
               

               
Cow position:
               
chr24:6742230-6742387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
265-416
               

               
Cow position:
               
chr24:21102417-21102562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
265-423
               

               
Cow position:
               
chr24:885433-885275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
265-423
               

               
Cow position:
               
chr24:16994890-16995048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
265-423
               

               
Cow position:
               
chr24:27066239-27066400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
265-423
               

               
Cow position:
               
chr24:34006200-34006036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
93, 137
               

               
Conread position:
               
265-426
               

               
Cow position:
               
chr24:35250103-35249936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 130
               

               
Conread position:
               
265-430
               

               
Cow position:
               
chr24:18702407-18702577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
93, 62
               

               
Conread position:
               
265-431
               

               
Cow position:
               
chr24:11155657-11155485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
265-431
               

               
Cow position:
               
chr24:14899765-14899919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
265-431
               

               
Cow position:
               
chr24:24810527-24810704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
265-431
               

               
Cow position:
               
chr24:26880762-26880933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
90, 8
               

               
Conread position:
               
265-433
               

               
Cow position:
               
chr24:28721897-28722057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
265-436
               

               
Cow position:
               
chr24:9300636-9300812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
82, 61
               

               
Conread position:
               
265-436
               

               
Cow position:
               
chr24:34302029-34301853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
94, 13
               

               
Conread position:
               
265-437
               

               
Cow position:
               
chr24:6677655-6677821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
74, 86
               

               
Conread position:
               
265-438
               

               
Cow position:
               
chr24:3493893-3494067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
265-443
               

               
Cow position:
               
chr24:39911024-39910842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
92, 55
               

               
Conread position:
               
265-444
               

               
Cow position:
               
chr24:17309128-17308951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
265-445
               

               
Cow position:
               
chr24:25947853-25947670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
95, 164
               

               
Conread position:
               
265-445
               

               
Cow position:
               
chr24:34272819-34273011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
265-445
               

               
Cow position:
               
chr24:43155292-43155105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 114
               

               
Conread position:
               
265-446
               

               
Cow position:
               
chr24:8676832-8677018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
82, 73
               

               
Conread position:
               
265-446
               

               
Cow position:
               
chr24:19186946-19187123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
266-381
               

               
Cow position:
               
chr24:33311346-33311230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
266-443
               

               
Cow position:
               
chr24:26588230-26588407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
83, 163
               

               
Conread position:
               
267-361
               

               
Cow position:
               
chr24:28470669-28470575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
267-390
               

               
Cow position:
               
chr24:39960987-39960863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 30
               

               
Conread position:
               
267-396
               

               
Cow position:
               
chr24:27202099-27202228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
267-409
               

               
Cow position:
               
chr24:21252024-21251886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
267-417
               

               
Cow position:
               
chr24:43028319-43028164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
267-422
               

               
Cow position:
               
chr24:33244406-33244555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
127, 76
               

               
Conread position:
               
267-423
               

               
Cow position:
               
chr24:17311209-17311059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
267-430
               

               
Cow position:
               
chr24:15288838-15289004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
267-430
               

               
Cow position:
               
chr24:18405270-18405102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
267-435
               

               
Cow position:
               
chr24:230294-230461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
71, 98
               

               
Conread position:
               
267-435
               

               
Cow position:
               
chr24:16089239-16089410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
84, 68
               

               
Conread position:
               
267-435
               

               
Cow position:
               
chr24:38693869-38693696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 129
               

               
Conread position:
               
267-436
               

               
Cow position:
               
chr24:42226284-42226447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
267-437
               

               
Cow position:
               
chr24:18750718-18750893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
93, 167
               

               
Conread position:
               
267-438
               

               
Cow position:
               
chr24:1269794-1269962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
267-442
               

               
Cow position:
               
chr24:31383127-31383296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
267-443
               

               
Cow position:
               
chr24:18484983-18484803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
267-443
               

               
Cow position:
               
chr24:21519436-21519620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
267-443
               

               
Cow position:
               
chr24:21656417-21656598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 167
               

               
Conread position:
               
267-444
               

               
Cow position:
               
chr24:27149394-27149573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
87, 113
               

               
Conread position:
               
267-445
               

               
Cow position:
               
chr24:18810842-18811023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
93, 157
               

               
Conread position:
               
267-445
               

               
Cow position:
               
chr24:24091329-24091146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 165
               

               
Conread position:
               
267-445
               

               
Cow position:
               
chr24:30325773-30325593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
27, 159
               

               
Conread position:
               
267-445
               

               
Cow position:
               
chr24:40055500-40055319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
268-391
               

               
Cow position:
               
chr24:16895126-16895009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
268-419
               

               
Cow position:
               
chr24:35675551-35675697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
268-420
               

               
Cow position:
               
chr24:41423615-41423763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
268-422
               

               
Cow position:
               
chr24:5360728-5360880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
268-423
               

               
Cow position:
               
chr24:11836392-11836231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
268-423
               

               
Cow position:
               
chr24:14373570-14373408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 73
               

               
Conread position:
               
268-423
               

               
Cow position:
               
chr24:23000025-23000171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
67, 84
               

               
Conread position:
               
268-423
               

               
Cow position:
               
chr24:30235882-30236042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
90, 78
               

               
Conread position:
               
268-423
               

               
Cow position:
               
chr24:33372564-33372716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
268-423
               

               
Cow position:
               
chr24:38478380-38478224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
93, 58
               

               
Conread position:
               
268-429
               

               
Cow position:
               
chr24:6887020-6887183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 97
               

               
Conread position:
               
268-429
               

               
Cow position:
               
chr24:39488356-39488524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
268-432
               

               
Cow position:
               
chr24:13610320-13610482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
53, 85
               

               
Conread position:
               
268-435
               

               
Cow position:
               
chr24:28256047-28255882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 84
               

               
Conread position:
               
268-436
               

               
Cow position:
               
chr24:22194431-22194597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
268-436
               

               
Cow position:
               
chr24:28234054-28234224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
268-436
               

               
Cow position:
               
chr24:29677904-29677727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
67, 170
               

               
Conread position:
               
268-436
               

               
Cow position:
               
chr24:34390288-34390453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
97, 112
               

               
Conread position:
               
268-443
               

               
Cow position:
               
chr24:21606665-21606487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
88, 18
               

               
Conread position:
               
268-444
               

               
Cow position:
               
chr24:43373072-43373252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
85, 135
               

               
Conread position:
               
268-445
               

               
Cow position:
               
chr24:27919135-27919317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 10
               

               
Conread position:
               
268-445
               

               
Cow position:
               
chr24:34896687-34896511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 47
               

               
Conread position:
               
268-446
               

               
Cow position:
               
chr24:10309652-10309832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
74, 132
               

               
Conread position:
               
268-446
               

               
Cow position:
               
chr24:23046886-23046704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
95, 161
               

               
Conread position:
               
269-422
               

               
Cow position:
               
chr24:7777616-7777465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
147, 94
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr24:17860245-17860091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 69
               

               
Conread position:
               
269-444
               

               
Cow position:
               
chr24:11035493-11035322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
142, 34
               

               
Conread position:
               
269-445
               

               
Cow position:
               
chr24:11266779-11266959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
100, 165
               

               
Conread position:
               
270-419
               

               
Cow position:
               
chr24:18401306-18401151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
270-423
               

               
Cow position:
               
chr24:27413097-27412945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
85, 41
               

               
Conread position:
               
270-439
               

               
Cow position:
               
chr24:35335105-35335268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
271-443
               

               
Cow position:
               
chr24:26001402-26001575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
87, 76
               

               
Conread position:
               
271-445
               

               
Cow position:
               
chr24:42194725-42194552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
146, 44
               

               
Conread position:
               
272-417
               

               
Cow position:
               
chr24:32974581-32974442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
272-422
               

               
Cow position:
               
chr24:22079478-22079632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
272-423
               

               
Cow position:
               
chr24:28787869-28788028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
272-431
               

               
Cow position:
               
chr24:29539914-29539752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
272-444
               

               
Cow position:
               
chr24:21524080-21524255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 100
               

               
Conread position:
               
272-445
               

               
Cow position:
               
chr24:36554682-36554510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
272-446
               

               
Cow position:
               
chr24:18137286-18137109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
65, 59
               

               
Conread position:
               
273-419
               

               
Cow position:
               
chr24:24540474-24540326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
273-430
               

               
Cow position:
               
chr24:27719510-27719353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
273-436
               

               
Cow position:
               
chr24:27040064-27040233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
275-422
               

               
Cow position:
               
chr24:35365689-35365538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
71, 47
               

               
Conread position:
               
275-431
               

               
Cow position:
               
chr24:28553545-28553394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
275-436
               

               
Cow position:
               
chr24:43445995-43445829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
67, 158
               

               
Conread position:
               
275-443
               

               
Cow position:
               
chr24:38006699-38006523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
67, 161
               

               
Conread position:
               
276-418
               

               
Cow position:
               
chr24:38428093-38427945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
276-419
               

               
Cow position:
               
chr24:25122361-25122503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
76, 61
               

               
Conread position:
               
276-436
               

               
Cow position:
               
chr24:6488228-6488388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
154, 134
               

               
Conread position:
               
277-436
               

               
Cow position:
               
chr24:22156167-22156331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
86, 156
               

               
Conread position:
               
277-445
               

               
Cow position:
               
chr24:3056952-3057116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
72, 41
               

               
Conread position:
               
278-446
               

               
Cow position:
               
chr24:8602969-8602796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 148
               

               
Conread position:
               
279-414
               

               
Cow position:
               
chr24:17178626-17178767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
279-436
               

               
Cow position:
               
chr24:22641112-22641275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
280-423
               

               
Cow position:
               
chr24:415590-415739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
281-446
               

               
Cow position:
               
chr24:27791710-27791552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
283-436
               

               
Cow position:
               
chr24:3404645-3404799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
283-436
               

               
Cow position:
               
chr24:40592744-40592897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
142, 59
               

               
Conread position:
               
283-438
               

               
Cow position:
               
chr24:39914607-39914757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
283-444
               

               
Cow position:
               
chr24:2359155-2358996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
286-416
               

               
Cow position:
               
chr24:18817416-18817552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
286-436
               

               
Cow position:
               
chr24:43027197-43027041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 120
               

               
Conread position:
               
286-445
               

               
Cow position:
               
chr24:19763501-19763338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 143
               

               
Conread position:
               
288-423
               

               
Cow position:
               
chr24:2223180-2223051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
288-445
               

               
Cow position:
               
chr24:41925854-41926003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
289-436
               

               
Cow position:
               
chr24:28303322-28303178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
136, 58
               

               
Conread position:
               
292-436
               

               
Cow position:
               
chr24:12241754-12241903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 137
               

               
Conread position:
               
298-422
               

               
Cow position:
               
chr24:10125926-10126048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
300-423
               

               
Cow position:
               
chr24:35210098-35210228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
304-442
               

               
Cow position:
               
chr24:7917334-7917191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 130
               

               
Conread position:
               
315-445
               

               
Cow position:
               
chr24:28566275-28566144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 42
               

               
Conread position:
               
326-444
               

               
Cow position:
               
chr24:29538243-29538126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
102, 0
               
Show alignments to all cow chromosomes.