Cow genome map
| Conread name: | rssp31_l9.y1 |
| Conread position: | 211-402 |
| Cow position: | chr14:47873301-47873104 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 215-406 |
| Cow position: | chr14:32584198-32584006 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 63, 118 |
| Conread position: | 215-414 |
| Cow position: | chr14:13581696-13581898 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 50, 91 |
| Conread position: | 216-379 |
| Cow position: | chr14:2289081-2289250 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 216-400 |
| Cow position: | chr14:8924924-8925114 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-400 |
| Cow position: | chr14:13683394-13683584 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-400 |
| Cow position: | chr14:19523880-19524070 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-400 |
| Cow position: | chr14:34763557-34763747 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-400 |
| Cow position: | chr14:38651739-38651929 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-400 |
| Cow position: | chr14:40483634-40483444 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-401 |
| Cow position: | chr14:27040555-27040367 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 216-402 |
| Cow position: | chr14:13769463-13769276 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 59, 164 |
| Conread position: | 216-402 |
| Cow position: | chr14:16997210-16997018 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 216-402 |
| Cow position: | chr14:24797862-24797670 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-402 |
| Cow position: | chr14:29044845-29044653 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-402 |
| Cow position: | chr14:38435859-38436051 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-402 |
| Cow position: | chr14:46302732-46302925 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 216-402 |
| Cow position: | chr14:50142195-50142004 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 49, 93 |
| Conread position: | 216-406 |
| Cow position: | chr14:8885053-8884858 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 216-406 |
| Cow position: | chr14:13104769-13104965 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-406 |
| Cow position: | chr14:45576474-45576667 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 47, 142 |
| Conread position: | 216-409 |
| Cow position: | chr14:446439-446244 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 59, 132 |
| Conread position: | 216-412 |
| Cow position: | chr14:30665101-30664904 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 47, 80 |
| Conread position: | 216-412 |
| Cow position: | chr14:44584072-44584271 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 216-413 |
| Cow position: | chr14:8102845-8102645 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 46, 99 |
| Conread position: | 216-413 |
| Cow position: | chr14:24990452-24990246 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 216-414 |
| Cow position: | chr14:12483229-12483435 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 216-414 |
| Cow position: | chr14:12903162-12903367 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 216-414 |
| Cow position: | chr14:13811207-13811009 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 161 |
| Conread position: | 216-414 |
| Cow position: | chr14:48495070-48495269 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 62, 142 |
| Conread position: | 216-416 |
| Cow position: | chr14:5645234-5645444 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 216-416 |
| Cow position: | chr14:9482779-9482987 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr14:9811509-9811716 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 59, 129 |
| Conread position: | 216-416 |
| Cow position: | chr14:10310387-10310595 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 216-416 |
| Cow position: | chr14:11462252-11462044 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 58, 90 |
| Conread position: | 216-416 |
| Cow position: | chr14:12740221-12740013 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 216-416 |
| Cow position: | chr14:12833678-12833886 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr14:12858809-12858601 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr14:13370055-13370261 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 216-416 |
| Cow position: | chr14:13559991-13560199 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 58, 151 |
| Conread position: | 216-416 |
| Cow position: | chr14:15336805-15336597 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr14:17488511-17488303 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr14:17762561-17762352 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 216-416 |
| Cow position: | chr14:19418922-19419130 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 216-416 |
| Cow position: | chr14:20786212-20786420 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 216-416 |
| Cow position: | chr14:23254510-23254302 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr14:24922611-24922818 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 59, 163 |
| Conread position: | 216-416 |
| Cow position: | chr14:25683967-25683762 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 48, 94 |
| Conread position: | 216-416 |
| Cow position: | chr14:28993520-28993312 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 216-416 |
| Cow position: | chr14:31400655-31400452 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 47, 88 |
| Conread position: | 216-416 |
| Cow position: | chr14:31882060-31881853 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 59, 156 |
| Conread position: | 216-416 |
| Cow position: | chr14:33835182-33834975 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr14:34629367-34629159 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr14:35419699-35419903 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 59, 99 |
| Conread position: | 216-416 |
| Cow position: | chr14:38047008-38047212 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 59, 102 |
| Conread position: | 216-416 |
| Cow position: | chr14:40968983-40969191 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr14:42259298-42259498 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 93 |
| Conread position: | 216-416 |
| Cow position: | chr14:42626849-42626643 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 190 |
| Conread position: | 216-416 |
| Cow position: | chr14:44367505-44367713 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 216-416 |
| Cow position: | chr14:44554674-44554876 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 48, 157 |
| Conread position: | 216-416 |
| Cow position: | chr14:45025801-45025593 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 106 |
| Conread position: | 216-416 |
| Cow position: | chr14:46849212-46849010 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 83, 92 |
| Conread position: | 216-416 |
| Cow position: | chr14:46960215-46960423 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr14:50137099-50137304 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 58, 118 |
| Conread position: | 217-416 |
| Cow position: | chr14:37443797-37444004 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 220-402 |
| Cow position: | chr14:16916895-16916707 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 54, 86 |
| Conread position: | 220-406 |
| Cow position: | chr14:19489813-19490003 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 39, 93 |
| Conread position: | 220-406 |
| Cow position: | chr14:34394570-34394757 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 220-413 |
| Cow position: | chr14:45583146-45583344 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 43, 156 |
| Conread position: | 220-416 |
| Cow position: | chr14:11151084-11150880 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 220-416 |
| Cow position: | chr14:21541080-21540883 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 40, 108 |
| Conread position: | 220-416 |
| Cow position: | chr14:31155657-31155862 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 222-416 |
| Cow position: | chr14:28116895-28117092 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 41, 132 |
| Conread position: | 224-416 |
| Cow position: | chr14:5500770-5500963 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 101 |
| Conread position: | 266-416 |
| Cow position: | chr14:37335092-37334941 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 139, 0 |
Show alignments to all cow chromosomes.