Cow genome map

Conread name: rssp31_l9.y1

Conread position: 207-416
Cow position: chr16:53510048-53509835 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 57, 9

Conread position: 211-416
Cow position: chr16:7137362-7137157 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 116, 87

Conread position: 214-416
Cow position: chr16:45533944-45534154 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 215-390
Cow position: chr16:4461828-4461648 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 90

Conread position: 215-402
Cow position: chr16:14662625-14662432 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 215-416
Cow position: chr16:3349493-3349700 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 215-416
Cow position: chr16:24637031-24636822 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 216-396
Cow position: chr16:39475314-39475498 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 39

Conread position: 216-399
Cow position: chr16:46365318-46365129 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 216-400
Cow position: chr16:20968463-20968278 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 58, 85

Conread position: 216-400
Cow position: chr16:25879800-25879990 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 216-402
Cow position: chr16:10440723-10440915 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 216-402
Cow position: chr16:14100336-14100528 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 90

Conread position: 216-402
Cow position: chr16:16539893-16540086 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 49, 90

Conread position: 216-402
Cow position: chr16:19081536-19081728 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 216-402
Cow position: chr16:25344462-25344655 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 216-402
Cow position: chr16:26627236-26627428 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 216-402
Cow position: chr16:26666188-26666380 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 59, 90

Conread position: 216-402
Cow position: chr16:27593338-27593146 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 216-402
Cow position: chr16:28468639-28468447 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 216-406
Cow position: chr16:39033849-39033665 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 216-406
Cow position: chr16:46554906-46555102 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 216-408
Cow position: chr16:7155088-7155284 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 156

Conread position: 216-412
Cow position: chr16:25173730-25173925 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 124

Conread position: 216-413
Cow position: chr16:42733801-42733597 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 147

Conread position: 216-414
Cow position: chr16:15485275-15485480 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 129

Conread position: 216-414
Cow position: chr16:25157910-25157714 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 47, 91

Conread position: 216-414
Cow position: chr16:39615708-39615912 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 169
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 23, 93

Conread position: 216-415
Cow position: chr16:42074415-42074207 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 216-416
Cow position: chr16:43646-43852 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 45, 89

Conread position: 216-416
Cow position: chr16:417379-417587 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 58, 90

Conread position: 216-416
Cow position: chr16:701745-701951 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 59, 129

Conread position: 216-416
Cow position: chr16:1563904-1563696 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr16:1734222-1734431 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr16:3148552-3148348 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 216-416
Cow position: chr16:4721968-4722171 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 216-416
Cow position: chr16:5435309-5435517 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 216-416
Cow position: chr16:5488355-5488563 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 216-416
Cow position: chr16:7303240-7303448 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 216-416
Cow position: chr16:8813619-8813413 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 90

Conread position: 216-416
Cow position: chr16:11054475-11054682 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 58, 162

Conread position: 216-416
Cow position: chr16:12160796-12160591 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 216-416
Cow position: chr16:12244557-12244353 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 138

Conread position: 216-416
Cow position: chr16:12651412-12651620 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr16:14039909-14040117 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 90

Conread position: 216-416
Cow position: chr16:15349663-15349462 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 125

Conread position: 216-416
Cow position: chr16:15979894-15979686 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 216-416
Cow position: chr16:16150264-16150056 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr16:16681111-16680903 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr16:18212711-18212503 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr16:18651098-18650892 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 216-416
Cow position: chr16:18975352-18975560 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr16:20377937-20378137 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 59, 124

Conread position: 216-416
Cow position: chr16:22799220-22799012 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 102

Conread position: 216-416
Cow position: chr16:23711803-23711595 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr16:24209914-24209706 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 49, 102

Conread position: 216-416
Cow position: chr16:24407394-24407604 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr16:24988020-24987812 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr16:25075077-25075285 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 216-416
Cow position: chr16:25168721-25168919 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 131

Conread position: 216-416
Cow position: chr16:25454976-25454769 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 216-416
Cow position: chr16:26388681-26388476 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 82

Conread position: 216-416
Cow position: chr16:27012886-27013089 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 45, 100

Conread position: 216-416
Cow position: chr16:27730897-27730689 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 216-416
Cow position: chr16:28206627-28206419 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr16:28268231-28268024 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 91

Conread position: 216-416
Cow position: chr16:31425534-31425750 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 216-416
Cow position: chr16:32326348-32326555 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 66, 0

Conread position: 216-416
Cow position: chr16:34482649-34482849 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 79

Conread position: 216-416
Cow position: chr16:37446214-37446012 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 49, 148

Conread position: 216-416
Cow position: chr16:40879076-40879284 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr16:41575738-41575935 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 56

Conread position: 216-416
Cow position: chr16:42210980-42211188 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr16:45755129-45754939 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 58, 21

Conread position: 216-416
Cow position: chr16:47018265-47018062 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 47, 104

Conread position: 216-416
Cow position: chr16:47403866-47404072 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 216-416
Cow position: chr16:47772744-47772956 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 171
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 26, 0

Conread position: 216-416
Cow position: chr16:49142589-49142381 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 166
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 47, 0

Conread position: 216-416
Cow position: chr16:54179880-54179672 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 106

Conread position: 216-416
Cow position: chr16:56913750-56913546 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 217-414
Cow position: chr16:4973040-4972836 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 58, 168

Conread position: 217-416
Cow position: chr16:5833286-5833490 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 81

Conread position: 217-416
Cow position: chr16:14352197-14351992 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 217-416
Cow position: chr16:51087269-51087475 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 218-413
Cow position: chr16:25892994-25893197 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 220-402
Cow position: chr16:3769523-3769335 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 55, 100

Conread position: 220-411
Cow position: chr16:18694484-18694280 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 220-414
Cow position: chr16:20634729-20634531 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 35, 124

Conread position: 220-416
Cow position: chr16:193447-193246 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 161

Conread position: 220-416
Cow position: chr16:7457494-7457294 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 188

Conread position: 220-416
Cow position: chr16:13722101-13721897 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 55, 102

Conread position: 220-416
Cow position: chr16:24444929-24445135 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 43, 0

Conread position: 220-416
Cow position: chr16:28193812-28193609 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 174

Conread position: 220-416
Cow position: chr16:45465429-45465225 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 222-380
Cow position: chr16:34506215-34506380 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 222-414
Cow position: chr16:54287027-54287226 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 235-406
Cow position: chr16:48371600-48371423 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 151
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 27, 0

Conread position: 236-416
Cow position: chr16:236987-237169 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 151
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 27, 94

Conread position: 243-416
Cow position: chr16:24147168-24147344 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 100

Conread position: 280-416
Cow position: chr16:23403368-23403506 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 281-414
Cow position: chr16:19062391-19062526 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 129, 0

Show alignments to all cow chromosomes.