Cow genome map

Conread name: rssp31_l9.y1

Conread position: 214-406
Cow position: chr21:28476646-28476844 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 215-409
Cow position: chr21:33998172-33997978 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 46, 62

Conread position: 215-416
Cow position: chr21:15274687-15274894 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 92

Conread position: 215-416
Cow position: chr21:32573324-32573535 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 7, 93

Conread position: 215-416
Cow position: chr21:33317021-33316812 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 103

Conread position: 216-402
Cow position: chr21:2664819-2664627 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 216-402
Cow position: chr21:6966126-6965934 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 216-402
Cow position: chr21:10570633-10570825 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 216-402
Cow position: chr21:29423409-29423599 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 216-402
Cow position: chr21:30966597-30966405 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 216-402
Cow position: chr21:34900328-34900136 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 216-405
Cow position: chr21:36376336-36376531 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 102

Conread position: 216-406
Cow position: chr21:18824324-18824137 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 47, 91

Conread position: 216-409
Cow position: chr21:22463537-22463737 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 167
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 48, 167

Conread position: 216-413
Cow position: chr21:47532079-47532285 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 216-414
Cow position: chr21:22855259-22855450 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 47, 83

Conread position: 216-414
Cow position: chr21:27428770-27428569 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 46, 89

Conread position: 216-414
Cow position: chr21:31275690-31275894 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 140

Conread position: 216-416
Cow position: chr21:81093-81292 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 47, 161

Conread position: 216-416
Cow position: chr21:149493-149701 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr21:1195884-1196092 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 216-416
Cow position: chr21:2514197-2514405 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 216-416
Cow position: chr21:2905443-2905239 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 160
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 49, 126

Conread position: 216-416
Cow position: chr21:4719474-4719266 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr21:4898618-4898410 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr21:5020492-5020700 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 216-416
Cow position: chr21:6623160-6623365 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 98

Conread position: 216-416
Cow position: chr21:9895708-9895911 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 116

Conread position: 216-416
Cow position: chr21:11144504-11144296 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr21:11405534-11405326 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr21:13735813-13735608 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 26

Conread position: 216-416
Cow position: chr21:14533959-14534167 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr21:18285152-18285360 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 216-416
Cow position: chr21:19098796-19099001 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 58, 101

Conread position: 216-416
Cow position: chr21:19351515-19351307 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr21:26633883-26633676 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 216-416
Cow position: chr21:27148206-27147998 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr21:27287325-27287530 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 58, 103

Conread position: 216-416
Cow position: chr21:28915629-28915422 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 168

Conread position: 216-416
Cow position: chr21:31512924-31512717 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 150

Conread position: 216-416
Cow position: chr21:33983929-33983721 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 216-416
Cow position: chr21:36534862-36534654 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 216-416
Cow position: chr21:37298490-37298694 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 18

Conread position: 216-416
Cow position: chr21:38866266-38866058 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr21:39428748-39428956 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr21:40268064-40267869 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 188, 59

Conread position: 216-416
Cow position: chr21:42917139-42917347 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr21:43404091-43403884 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 90

Conread position: 216-416
Cow position: chr21:47360823-47360619 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 164
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 59, 86

Conread position: 216-416
Cow position: chr21:48273851-48273643 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr21:48292005-48291801 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 89

Conread position: 216-416
Cow position: chr21:49655837-49655629 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 58, 100

Conread position: 217-416
Cow position: chr21:18846987-18846782 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 168
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 46, 106

Conread position: 218-413
Cow position: chr21:18851361-18851163 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 80

Conread position: 219-416
Cow position: chr21:39400584-39400789 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 20, 178

Conread position: 220-402
Cow position: chr21:36506488-36506301 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 157

Conread position: 220-406
Cow position: chr21:24887000-24887186 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 44, 110

Conread position: 220-411
Cow position: chr21:48530518-48530711 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 84

Conread position: 220-414
Cow position: chr21:18837296-18837098 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 55, 0

Conread position: 220-416
Cow position: chr21:19627358-19627154 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 220-416
Cow position: chr21:33256906-33257110 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 221-416
Cow position: chr21:4097926-4098127 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 39, 86

Conread position: 222-406
Cow position: chr21:38026970-38027161 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 41, 97

Conread position: 222-416
Cow position: chr21:46831214-46831011 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 224-406
Cow position: chr21:37323446-37323261 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 229-414
Cow position: chr21:36977569-36977386 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 46, 26

Conread position: 235-414
Cow position: chr21:14727052-14727238 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 156
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 40, 72

Conread position: 274-414
Cow position: chr21:4791525-4791667 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 121
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 20, 0

Show alignments to all cow chromosomes.