Cow genome map

Conread name: rssp31_l9.y1

Conread position: 215-349
Cow position: chr22:36595337-36595197 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 215-402
Cow position: chr22:39465369-39465176 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 215-406
Cow position: chr22:26104967-26104770 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 215-414
Cow position: chr22:17994153-17993949 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 163
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 49, 40

Conread position: 215-416
Cow position: chr22:14510345-14510136 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 164
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 46, 0

Conread position: 216-395
Cow position: chr22:46022094-46022278 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 100

Conread position: 216-396
Cow position: chr22:8480391-8480576 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 152
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 48, 0

Conread position: 216-396
Cow position: chr22:8504636-8504821 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 153
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 48, 0

Conread position: 216-400
Cow position: chr22:3714330-3714140 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 216-402
Cow position: chr22:5312574-5312382 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 216-402
Cow position: chr22:8299319-8299511 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 216-402
Cow position: chr22:17325329-17325137 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 216-402
Cow position: chr22:18603638-18603446 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 106

Conread position: 216-402
Cow position: chr22:20237401-20237209 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 216-402
Cow position: chr22:26090063-26089871 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 216-402
Cow position: chr22:28785292-28785482 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 101

Conread position: 216-402
Cow position: chr22:32209784-32209977 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 216-402
Cow position: chr22:43236010-43236202 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 102

Conread position: 216-406
Cow position: chr22:46033399-46033594 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 157
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 47, 115

Conread position: 216-411
Cow position: chr22:10160897-10161103 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 216-412
Cow position: chr22:288459-288263 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 157
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 58, 83

Conread position: 216-412
Cow position: chr22:5015260-5015463 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 216-412
Cow position: chr22:26167615-26167421 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 47, 106

Conread position: 216-413
Cow position: chr22:14817467-14817266 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 47, 129

Conread position: 216-413
Cow position: chr22:36503528-36503327 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 168
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 47, 151

Conread position: 216-414
Cow position: chr22:15497179-15497373 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 185, 44

Conread position: 216-414
Cow position: chr22:34931906-34931701 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 47, 129

Conread position: 216-414
Cow position: chr22:36555973-36555770 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 8

Conread position: 216-414
Cow position: chr22:37323442-37323643 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 114

Conread position: 216-414
Cow position: chr22:41846392-41846190 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 216-415
Cow position: chr22:21364413-21364206 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 47, 91

Conread position: 216-416
Cow position: chr22:533274-533481 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 119

Conread position: 216-416
Cow position: chr22:697105-697313 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr22:699118-699326 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr22:1036052-1036260 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 216-416
Cow position: chr22:3065626-3065422 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 59, 88

Conread position: 216-416
Cow position: chr22:3489163-3488955 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr22:5315413-5315622 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 58, 98

Conread position: 216-416
Cow position: chr22:8339590-8339799 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 216-416
Cow position: chr22:10313800-10314006 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 216-416
Cow position: chr22:10550039-10550247 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr22:11779594-11779390 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 61, 82

Conread position: 216-416
Cow position: chr22:12869283-12869076 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 58, 132

Conread position: 216-416
Cow position: chr22:13184981-13185185 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 47, 126

Conread position: 216-416
Cow position: chr22:13209555-13209761 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 47, 91

Conread position: 216-416
Cow position: chr22:15308790-15308581 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 216-416
Cow position: chr22:19048598-19048396 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 160
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 47, 138

Conread position: 216-416
Cow position: chr22:20569868-20569661 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 59, 88

Conread position: 216-416
Cow position: chr22:21592596-21592804 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr22:22607331-22607539 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr22:25336324-25336532 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 86

Conread position: 216-416
Cow position: chr22:26338495-26338695 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 46, 68

Conread position: 216-416
Cow position: chr22:27223664-27223461 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 119

Conread position: 216-416
Cow position: chr22:27306791-27306583 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr22:28178122-28178328 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 216-416
Cow position: chr22:29397257-29397465 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 102

Conread position: 216-416
Cow position: chr22:29464064-29464272 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 58, 106

Conread position: 216-416
Cow position: chr22:29855022-29855230 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr22:29956018-29955810 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 165
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 216-416
Cow position: chr22:30675554-30675346 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr22:31331699-31331491 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 216-416
Cow position: chr22:32812038-32811830 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 59, 94

Conread position: 216-416
Cow position: chr22:32894081-32894289 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 216-416
Cow position: chr22:32943621-32943829 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr22:36584456-36584253 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 166
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 59, 129

Conread position: 216-416
Cow position: chr22:37290669-37290473 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 49

Conread position: 216-416
Cow position: chr22:38553409-38553614 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 109

Conread position: 216-416
Cow position: chr22:39902554-39902762 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr22:41272029-41271824 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 216-416
Cow position: chr22:42994346-42994554 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr22:43788901-43789108 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 216-416
Cow position: chr22:44366037-44365829 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 90

Conread position: 216-416
Cow position: chr22:44925153-44924950 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 47, 91

Conread position: 216-416
Cow position: chr22:45543769-45543561 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 217-409
Cow position: chr22:3270653-3270458 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 46, 0

Conread position: 217-416
Cow position: chr22:33951778-33951578 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 187, 58

Conread position: 218-414
Cow position: chr22:6722398-6722191 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 164
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 46, 15

Conread position: 218-416
Cow position: chr22:36543295-36543099 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 165
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 43, 160

Conread position: 220-391
Cow position: chr22:11698431-11698254 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 220-402
Cow position: chr22:19600625-19600441 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 86

Conread position: 220-402
Cow position: chr22:46568912-46568724 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 220-416
Cow position: chr22:3275180-3274976 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 220-416
Cow position: chr22:12969227-12969025 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 220-416
Cow position: chr22:28129930-28130134 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 220-416
Cow position: chr22:33200458-33200660 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 84

Conread position: 220-416
Cow position: chr22:34758885-34758680 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 221-409
Cow position: chr22:18194876-18195068 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 221-416
Cow position: chr22:2415075-2415279 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 221-416
Cow position: chr22:32951418-32951610 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 42, 70

Conread position: 222-406
Cow position: chr22:8876219-8876409 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 12

Conread position: 222-416
Cow position: chr22:12625378-12625179 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 35, 0

Conread position: 225-406
Cow position: chr22:47462414-47462605 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 67

Conread position: 225-416
Cow position: chr22:42233965-42234158 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 50, 126

Conread position: 228-406
Cow position: chr22:14005132-14005309 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 150
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 49, 113

Conread position: 242-416
Cow position: chr22:13017801-13017619 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 274-414
Cow position: chr22:35755455-35755315 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 121
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.