Cow genome map
| Conread name: | rssp31_l9.y1 |
| Conread position: | 215-406 |
| Cow position: | chr27:21451610-21451806 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 216-399 |
| Cow position: | chr27:28051617-28051429 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 216-402 |
| Cow position: | chr27:3232367-3232175 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 90 |
| Conread position: | 216-402 |
| Cow position: | chr27:3653533-3653341 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-402 |
| Cow position: | chr27:8201105-8201294 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 48, 99 |
| Conread position: | 216-402 |
| Cow position: | chr27:13353473-13353665 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 216-402 |
| Cow position: | chr27:20001583-20001764 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 216-403 |
| Cow position: | chr27:15374981-15375163 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 145 |
| Conread position: | 216-406 |
| Cow position: | chr27:19932399-19932205 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 59, 175 |
| Conread position: | 216-416 |
| Cow position: | chr27:165752-165544 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 216-416 |
| Cow position: | chr27:2001013-2001220 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 216-416 |
| Cow position: | chr27:2681690-2681895 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 216-416 |
| Cow position: | chr27:4331573-4331361 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 90 |
| Conread position: | 216-416 |
| Cow position: | chr27:4828667-4828872 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 47, 81 |
| Conread position: | 216-416 |
| Cow position: | chr27:4982539-4982747 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 216-416 |
| Cow position: | chr27:6524111-6523904 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 165 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 216-416 |
| Cow position: | chr27:8429170-8429380 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 216-416 |
| Cow position: | chr27:9970338-9970546 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr27:10579114-10579322 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 216-416 |
| Cow position: | chr27:12006315-12006523 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr27:13901291-13901499 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 90 |
| Conread position: | 216-416 |
| Cow position: | chr27:15405795-15405996 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 166 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 55, 135 |
| Conread position: | 216-416 |
| Cow position: | chr27:15634175-15633968 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 156 |
| Conread position: | 216-416 |
| Cow position: | chr27:16031230-16031022 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr27:21392179-21392385 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 47, 167 |
| Conread position: | 216-416 |
| Cow position: | chr27:22797490-22797284 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 59, 100 |
| Conread position: | 216-416 |
| Cow position: | chr27:25801038-25800836 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 142 |
| Conread position: | 216-416 |
| Cow position: | chr27:26330099-26330307 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr27:27291556-27291768 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 216-416 |
| Cow position: | chr27:30307102-30306894 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 217-416 |
| Cow position: | chr27:25971433-25971225 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 155 |
| Conread position: | 217-416 |
| Cow position: | chr27:30783073-30783278 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 220-402 |
| Cow position: | chr27:9990032-9989843 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 220-414 |
| Cow position: | chr27:12277281-12277483 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 43, 110 |
| Conread position: | 220-416 |
| Cow position: | chr27:8291014-8291216 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 220-416 |
| Cow position: | chr27:14669368-14669565 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 61 |
| Conread position: | 221-416 |
| Cow position: | chr27:14380476-14380678 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 236-414 |
| Cow position: | chr27:8592568-8592754 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 28, 0 |
Show alignments to all cow chromosomes.