Cow genome map
| Conread name: | rssp31_l9.y1 |
| Conread position: | 215-406 |
| Cow position: | chr28:8971289-8971483 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 113 |
| Conread position: | 215-415 |
| Cow position: | chr28:23675026-23675233 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 46, 110 |
| Conread position: | 215-416 |
| Cow position: | chr28:29807227-29807020 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 49, 105 |
| Conread position: | 216-374 |
| Cow position: | chr28:32730801-32730640 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 216-375 |
| Cow position: | chr28:1837006-1837162 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 62, 56 |
| Conread position: | 216-400 |
| Cow position: | chr28:5312187-5312377 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-402 |
| Cow position: | chr28:7744310-7744502 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 90 |
| Conread position: | 216-402 |
| Cow position: | chr28:16181581-16181773 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-402 |
| Cow position: | chr28:26419788-26419596 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-402 |
| Cow position: | chr28:29823399-29823590 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 216-402 |
| Cow position: | chr28:32786214-32786022 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 216-406 |
| Cow position: | chr28:3745176-3745372 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 159 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 216-406 |
| Cow position: | chr28:6474039-6473847 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-411 |
| Cow position: | chr28:13606645-13606842 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 47, 101 |
| Conread position: | 216-412 |
| Cow position: | chr28:2223153-2222947 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 216-413 |
| Cow position: | chr28:16543486-16543284 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 158 |
| Conread position: | 216-416 |
| Cow position: | chr28:444621-444829 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr28:1198408-1198616 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr28:1944082-1943875 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 216-416 |
| Cow position: | chr28:3001643-3001438 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 99 |
| Conread position: | 216-416 |
| Cow position: | chr28:3627226-3627434 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr28:4214105-4214311 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 216-416 |
| Cow position: | chr28:5111508-5111302 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 216-416 |
| Cow position: | chr28:5637263-5637471 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr28:6047009-6047216 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 90 |
| Conread position: | 216-416 |
| Cow position: | chr28:6472226-6472019 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 138 |
| Conread position: | 216-416 |
| Cow position: | chr28:6535585-6535377 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 102 |
| Conread position: | 216-416 |
| Cow position: | chr28:7336196-7336404 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr28:9182082-9182290 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr28:9288180-9287972 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr28:10280065-10280260 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 126, 13 |
| Conread position: | 216-416 |
| Cow position: | chr28:10303051-10303258 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr28:12429421-12429626 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 216-416 |
| Cow position: | chr28:13323346-13323554 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr28:13463176-13463384 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr28:14150201-14150409 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 216-416 |
| Cow position: | chr28:15917312-15917106 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 58, 88 |
| Conread position: | 216-416 |
| Cow position: | chr28:17391646-17391854 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 216-416 |
| Cow position: | chr28:18516933-18516725 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr28:20935199-20934991 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 216-416 |
| Cow position: | chr28:20967456-20967248 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 216-416 |
| Cow position: | chr28:21362725-21362929 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 58, 92 |
| Conread position: | 216-416 |
| Cow position: | chr28:23615356-23615565 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 216-416 |
| Cow position: | chr28:24992700-24992908 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr28:25826905-25826698 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 47, 91 |
| Conread position: | 216-416 |
| Cow position: | chr28:25849774-25849982 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr28:32588912-32589120 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-416 |
| Cow position: | chr28:33639783-33639989 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 217-416 |
| Cow position: | chr28:6776789-6776582 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 57, 105 |
| Conread position: | 218-416 |
| Cow position: | chr28:5804484-5804687 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 220-416 |
| Cow position: | chr28:8717736-8717532 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 220-416 |
| Cow position: | chr28:17030878-17030677 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 114 |
| Conread position: | 220-416 |
| Cow position: | chr28:32301364-32301164 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 220-416 |
| Cow position: | chr28:33255538-33255742 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 86 |
| Conread position: | 221-416 |
| Cow position: | chr28:1025115-1024912 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 42, 87 |
| Conread position: | 222-409 |
| Cow position: | chr28:14233976-14234168 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 41, 163 |
| Conread position: | 222-414 |
| Cow position: | chr28:14492539-14492731 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 59, 49 |
| Conread position: | 224-396 |
| Cow position: | chr28:2280682-2280505 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 39, 167 |
| Conread position: | 228-409 |
| Cow position: | chr28:8786541-8786729 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 156 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.