Cow genome map

Conread name: rssp31_l9.y1

Conread position: 213-416
Cow position: chr9:55031573-55031783 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 111

Conread position: 215-416
Cow position: chr9:53776763-53776971 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 154

Conread position: 216-350
Cow position: chr9:9357241-9357380 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 118
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 48, 82

Conread position: 216-354
Cow position: chr9:17007888-17007745 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 138

Conread position: 216-371
Cow position: chr9:9415027-9415188 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 216-372
Cow position: chr9:59508108-59507945 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 216-395
Cow position: chr9:15802470-15802655 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 216-397
Cow position: chr9:50003794-50003981 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 216-400
Cow position: chr9:2864494-2864306 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 91

Conread position: 216-400
Cow position: chr9:9021534-9021344 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 216-400
Cow position: chr9:39303482-39303292 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 216-400
Cow position: chr9:60409473-60409663 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 216-402
Cow position: chr9:4940428-4940236 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 216-402
Cow position: chr9:6707847-6707655 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 216-402
Cow position: chr9:7005812-7006004 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 216-402
Cow position: chr9:9016145-9016337 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 216-402
Cow position: chr9:18506753-18506561 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 216-402
Cow position: chr9:34238688-34238496 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 88

Conread position: 216-402
Cow position: chr9:51010632-51010816 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 154

Conread position: 216-406
Cow position: chr9:23421657-23421853 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 216-406
Cow position: chr9:64049345-64049536 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 216-409
Cow position: chr9:1938962-1938765 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 156
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 216-411
Cow position: chr9:23005494-23005312 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 68

Conread position: 216-412
Cow position: chr9:12161666-12161863 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 167
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 47, 93

Conread position: 216-414
Cow position: chr9:20988370-20988572 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 45, 126

Conread position: 216-414
Cow position: chr9:34690459-34690253 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 102

Conread position: 216-415
Cow position: chr9:29787606-29787398 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 216-416
Cow position: chr9:1307281-1307073 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr9:1838026-1838230 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 59, 88

Conread position: 216-416
Cow position: chr9:2856915-2857122 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 90

Conread position: 216-416
Cow position: chr9:2873545-2873754 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 90

Conread position: 216-416
Cow position: chr9:3052336-3052544 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr9:3061658-3061866 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 216-416
Cow position: chr9:3222545-3222747 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 48, 27

Conread position: 216-416
Cow position: chr9:5007044-5007252 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr9:5452569-5452361 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr9:6252639-6252843 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 216-416
Cow position: chr9:6365448-6365655 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 109

Conread position: 216-416
Cow position: chr9:7058979-7058772 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 108

Conread position: 216-416
Cow position: chr9:8282197-8281991 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 216-416
Cow position: chr9:9210214-9210422 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr9:9872010-9872218 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr9:9958113-9957907 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr9:13180991-13181188 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 10

Conread position: 216-416
Cow position: chr9:13220611-13220814 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr9:18539733-18539936 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 80

Conread position: 216-416
Cow position: chr9:19156221-19156013 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 58, 90

Conread position: 216-416
Cow position: chr9:24873879-24873678 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 59, 99

Conread position: 216-416
Cow position: chr9:24918217-24918009 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr9:27781841-27781633 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr9:28681271-28681479 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr9:28785415-28785621 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 173

Conread position: 216-416
Cow position: chr9:29337976-29338186 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 20, 0

Conread position: 216-416
Cow position: chr9:30401353-30401561 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr9:34688556-34688745 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 48, 124

Conread position: 216-416
Cow position: chr9:36829981-36829773 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 98

Conread position: 216-416
Cow position: chr9:37174334-37174126 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr9:37253475-37253683 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr9:41312970-41312762 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr9:42216426-42216631 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 47, 159

Conread position: 216-416
Cow position: chr9:43494119-43494327 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr9:43496205-43496413 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr9:44203009-44202801 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 216-416
Cow position: chr9:48795221-48795013 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr9:50840503-50840711 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 141
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr9:51692549-51692341 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 167
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 47, 0

Conread position: 216-416
Cow position: chr9:52526222-52526430 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 216-416
Cow position: chr9:54459431-54459223 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 216-416
Cow position: chr9:56862094-56861891 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 138

Conread position: 216-416
Cow position: chr9:58615624-58615418 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 167
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 58, 167

Conread position: 216-416
Cow position: chr9:62818150-62817942 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 219-416
Cow position: chr9:21461540-21461739 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 219-416
Cow position: chr9:28774193-28773989 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 167
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 56, 166

Conread position: 220-402
Cow position: chr9:30281941-30281754 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 55, 98

Conread position: 220-402
Cow position: chr9:51178594-51178406 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 220-414
Cow position: chr9:26087927-26087728 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 159
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 55, 88

Conread position: 220-416
Cow position: chr9:3411819-3411616 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 163
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 41, 110

Conread position: 220-416
Cow position: chr9:17061282-17061079 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 220-416
Cow position: chr9:33843398-33843602 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 98

Conread position: 220-416
Cow position: chr9:43856463-43856260 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 54, 176

Conread position: 220-416
Cow position: chr9:46627386-46627590 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 84

Conread position: 220-416
Cow position: chr9:55797029-55796827 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 41, 124

Conread position: 222-416
Cow position: chr9:54996950-54997152 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 166
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 41, 144

Conread position: 225-408
Cow position: chr9:37067923-37068107 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 96

Conread position: 232-416
Cow position: chr9:23028943-23028751 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 157
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 7, 0

Conread position: 274-409
Cow position: chr9:9515806-9515939 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 117
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 280-416
Cow position: chr9:62401180-62401043 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 120
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 122, 76

Conread position: 293-416
Cow position: chr9:20900128-20900251 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.