Cow genome map
| Conread name: | rsto206_k11.y1 |
| Conread position: | 35-302 |
| Cow position: | chr11:29659775-29659509 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 8, 12 |
| Conread position: | 44-306 |
| Cow position: | chr11:18447296-18447546 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 50-309 |
| Cow position: | chr11:21843930-21844188 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 16, 153 |
| Conread position: | 52-299 |
| Cow position: | chr11:46922685-46922933 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 27, 112 |
| Conread position: | 53-303 |
| Cow position: | chr11:5433467-5433217 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 26, 92 |
| Conread position: | 61-265 |
| Cow position: | chr11:30986828-30986628 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 99 |
| Conread position: | 61-278 |
| Cow position: | chr11:63165458-63165673 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 73 |
| Conread position: | 61-281 |
| Cow position: | chr11:55053056-55052842 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 40 |
| Conread position: | 61-293 |
| Cow position: | chr11:48296216-48295992 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 61-293 |
| Cow position: | chr11:63866469-63866700 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 100 |
| Conread position: | 61-302 |
| Cow position: | chr11:17721608-17721852 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 61-316 |
| Cow position: | chr11:45435264-45435011 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 193, 16 |
| Conread position: | 62-305 |
| Cow position: | chr11:25119745-25119983 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 64-299 |
| Cow position: | chr11:11558361-11558124 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 65-277 |
| Cow position: | chr11:67600967-67600759 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 66-293 |
| Cow position: | chr11:1932300-1932533 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 66-301 |
| Cow position: | chr11:39060420-39060651 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 66-304 |
| Cow position: | chr11:35580449-35580207 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 66-306 |
| Cow position: | chr11:2917406-2917640 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 15, 72 |
| Conread position: | 66-306 |
| Cow position: | chr11:44032193-44031962 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 66-309 |
| Cow position: | chr11:62789314-62789072 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 15, 79 |
| Conread position: | 67-304 |
| Cow position: | chr11:65762398-65762649 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 12, 18 |
| Conread position: | 67-308 |
| Cow position: | chr11:27248675-27248436 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 12, 94 |
| Conread position: | 68-233 |
| Cow position: | chr11:63484125-63483961 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 10, 92 |
| Conread position: | 68-239 |
| Cow position: | chr11:37042160-37041984 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 68-282 |
| Cow position: | chr11:18699057-18698849 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 85 |
| Conread position: | 68-284 |
| Cow position: | chr11:15382309-15382535 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 68-290 |
| Cow position: | chr11:4225272-4225059 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 68-293 |
| Cow position: | chr11:36940407-36940637 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 120 |
| Conread position: | 68-298 |
| Cow position: | chr11:32710701-32710468 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 113 |
| Conread position: | 68-302 |
| Cow position: | chr11:15772527-15772760 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 100 |
| Conread position: | 68-302 |
| Cow position: | chr11:53778806-53778566 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 68-304 |
| Cow position: | chr11:49872701-49872937 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 165 |
| Conread position: | 68-305 |
| Cow position: | chr11:16315061-16314818 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 7, 104 |
| Conread position: | 68-305 |
| Cow position: | chr11:37804365-37804608 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 68-306 |
| Cow position: | chr11:258989-259224 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 24, 98 |
| Conread position: | 68-307 |
| Cow position: | chr11:34646781-34646534 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 68-308 |
| Cow position: | chr11:261071-261323 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 51 |
| Conread position: | 68-308 |
| Cow position: | chr11:32254030-32254271 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 11, 100 |
| Conread position: | 69-270 |
| Cow position: | chr11:56115122-56114920 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 85 |
| Conread position: | 69-299 |
| Cow position: | chr11:42884600-42884833 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 10, 92 |
| Conread position: | 69-299 |
| Cow position: | chr11:53817039-53816810 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 100 |
| Conread position: | 69-302 |
| Cow position: | chr11:13592924-13592685 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 10, 132 |
| Conread position: | 69-302 |
| Cow position: | chr11:68913328-68913091 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 101 |
| Conread position: | 69-304 |
| Cow position: | chr11:53773868-53773629 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 10, 117 |
| Conread position: | 69-318 |
| Cow position: | chr11:41985863-41986114 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 15, 95 |
| Conread position: | 69-319 |
| Cow position: | chr11:35347566-35347824 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 119 |
| Conread position: | 70-260 |
| Cow position: | chr11:22884588-22884405 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 70-274 |
| Cow position: | chr11:74316890-74316687 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 84 |
| Conread position: | 70-276 |
| Cow position: | chr11:3175852-3175649 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 70-280 |
| Cow position: | chr11:30842843-30843047 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 70-291 |
| Cow position: | chr11:83043183-83043402 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 9, 69 |
| Conread position: | 70-293 |
| Cow position: | chr11:897848-897632 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 9, 36 |
| Conread position: | 70-293 |
| Cow position: | chr11:27404887-27405111 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 135 |
| Conread position: | 70-297 |
| Cow position: | chr11:6006493-6006261 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 70-299 |
| Cow position: | chr11:50152629-50152861 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 70-299 |
| Cow position: | chr11:65157221-65157456 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 70-300 |
| Cow position: | chr11:18924931-18924697 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 9, 99 |
| Conread position: | 70-301 |
| Cow position: | chr11:20238860-20238627 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 70-302 |
| Cow position: | chr11:1625038-1625274 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 9, 119 |
| Conread position: | 70-302 |
| Cow position: | chr11:31228137-31227913 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 24 |
| Conread position: | 70-304 |
| Cow position: | chr11:15017242-15017006 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 9, 213 |
| Conread position: | 70-305 |
| Cow position: | chr11:52690341-52690573 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 9, 43 |
| Conread position: | 70-305 |
| Cow position: | chr11:80923142-80923374 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 70-306 |
| Cow position: | chr11:35153636-35153879 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 43 |
| Conread position: | 70-306 |
| Cow position: | chr11:67614741-67614978 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 9, 103 |
| Conread position: | 70-306 |
| Cow position: | chr11:83032861-83032628 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 69 |
| Conread position: | 70-307 |
| Cow position: | chr11:29960474-29960242 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 231, 23 |
| Conread position: | 70-307 |
| Cow position: | chr11:69978149-69977916 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 31 |
| Conread position: | 70-308 |
| Cow position: | chr11:17676191-17676431 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 70-309 |
| Cow position: | chr11:44223065-44222832 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 70-310 |
| Cow position: | chr11:27747102-27746864 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 9, 76 |
| Conread position: | 71-244 |
| Cow position: | chr11:42206599-42206429 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 8, 30 |
| Conread position: | 71-269 |
| Cow position: | chr11:48315216-48315414 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 8, 90 |
| Conread position: | 71-280 |
| Cow position: | chr11:2900530-2900749 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 71-284 |
| Cow position: | chr11:23407643-23407432 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 8, 66 |
| Conread position: | 71-292 |
| Cow position: | chr11:52380689-52380912 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 71-293 |
| Cow position: | chr11:30830440-30830655 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 8, 27 |
| Conread position: | 71-299 |
| Cow position: | chr11:11469472-11469695 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 71-300 |
| Cow position: | chr11:21886013-21885784 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 8, 30 |
| Conread position: | 71-302 |
| Cow position: | chr11:38211822-38211595 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 71-306 |
| Cow position: | chr11:40608412-40608648 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 67, 161 |
| Conread position: | 71-306 |
| Cow position: | chr11:48086101-48085864 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 8, 101 |
| Conread position: | 71-307 |
| Cow position: | chr11:80639369-80639605 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 8, 45 |
| Conread position: | 71-308 |
| Cow position: | chr11:67615069-67615301 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 8, 30 |
| Conread position: | 71-317 |
| Cow position: | chr11:20205675-20205917 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 8, 68 |
| Conread position: | 76-305 |
| Cow position: | chr11:18852079-18851855 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 77-283 |
| Cow position: | chr11:63975306-63975098 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 102, 75 |
| Conread position: | 78-299 |
| Cow position: | chr11:30867351-30867136 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 78-303 |
| Cow position: | chr11:40395610-40395389 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 69 |
| Conread position: | 78-305 |
| Cow position: | chr11:5201472-5201705 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 80-269 |
| Cow position: | chr11:2484624-2484813 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 13 |
| Conread position: | 80-282 |
| Cow position: | chr11:13042976-13043176 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 80-298 |
| Cow position: | chr11:29786321-29786544 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 67, 91 |
| Conread position: | 80-299 |
| Cow position: | chr11:56311428-56311643 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 55, 96 |
| Conread position: | 80-301 |
| Cow position: | chr11:13061082-13061284 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 80-301 |
| Cow position: | chr11:52297051-52297266 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 80-303 |
| Cow position: | chr11:30964515-30964295 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 55, 103 |
| Conread position: | 80-303 |
| Cow position: | chr11:63998918-63999139 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 73, 183 |
| Conread position: | 80-304 |
| Cow position: | chr11:8437518-8437747 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 80-306 |
| Cow position: | chr11:62620548-62620320 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 100, 105 |
| Conread position: | 80-306 |
| Cow position: | chr11:80564469-80564238 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 63, 103 |
| Conread position: | 80-307 |
| Cow position: | chr11:51729446-51729232 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 80-308 |
| Cow position: | chr11:17036360-17036584 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 80-308 |
| Cow position: | chr11:17083141-17083367 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 73 |
| Conread position: | 80-309 |
| Cow position: | chr11:26274794-26275014 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 213, 52 |
| Conread position: | 80-309 |
| Cow position: | chr11:48544608-48544377 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 107, 55 |
| Conread position: | 80-309 |
| Cow position: | chr11:62239913-62239689 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 81-304 |
| Cow position: | chr11:33409095-33409314 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 83-246 |
| Cow position: | chr11:40818463-40818621 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 83-282 |
| Cow position: | chr11:30494157-30493966 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 83-284 |
| Cow position: | chr11:30894834-30895036 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 83-299 |
| Cow position: | chr11:47772213-47772437 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 83-304 |
| Cow position: | chr11:17227482-17227695 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 208, 55 |
| Conread position: | 83-304 |
| Cow position: | chr11:63435691-63435471 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 69, 155 |
| Conread position: | 83-305 |
| Cow position: | chr11:55744638-55744414 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 113 |
| Conread position: | 83-305 |
| Cow position: | chr11:72292730-72292499 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 83-307 |
| Cow position: | chr11:77319581-77319359 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 83-308 |
| Cow position: | chr11:4637006-4637228 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 83-310 |
| Cow position: | chr11:42296458-42296679 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 42 |
| Conread position: | 84-302 |
| Cow position: | chr11:42159894-42160105 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 202, 15 |
| Conread position: | 84-305 |
| Cow position: | chr11:80556386-80556170 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 85-237 |
| Cow position: | chr11:54872594-54872745 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 108, 74 |
| Conread position: | 85-284 |
| Cow position: | chr11:3896531-3896731 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 166 |
| Conread position: | 85-304 |
| Cow position: | chr11:34121362-34121146 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 111, 14 |
| Conread position: | 85-308 |
| Cow position: | chr11:62812786-62813006 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 86-284 |
| Cow position: | chr11:81135003-81135200 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 86-304 |
| Cow position: | chr11:18910718-18910929 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 131, 74 |
| Conread position: | 86-305 |
| Cow position: | chr11:2907368-2907577 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 209, 13 |
| Conread position: | 86-308 |
| Cow position: | chr11:24602123-24601909 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 85, 17 |
| Conread position: | 88-306 |
| Cow position: | chr11:75090055-75090273 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 64, 11 |
| Conread position: | 92-306 |
| Cow position: | chr11:39499515-39499304 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 106-307 |
| Cow position: | chr11:2575762-2575960 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 152, 24 |
| Conread position: | 107-282 |
| Cow position: | chr11:71022144-71021970 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 107-299 |
| Cow position: | chr11:31410735-31410925 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 107-307 |
| Cow position: | chr11:45646448-45646648 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 68, 118 |
| Conread position: | 108-282 |
| Cow position: | chr11:23586784-23586608 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 128-281 |
| Cow position: | chr11:79018937-79019088 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 128-302 |
| Cow position: | chr11:26845471-26845644 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 136-306 |
| Cow position: | chr11:35803254-35803082 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 100 |
| Conread position: | 137-304 |
| Cow position: | chr11:20761957-20761795 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 137-318 |
| Cow position: | chr11:35684389-35684565 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 140-303 |
| Cow position: | chr11:69119406-69119242 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 140-304 |
| Cow position: | chr11:48248104-48248268 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-306 |
| Cow position: | chr11:69076022-69075857 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 140-307 |
| Cow position: | chr11:30955112-30954946 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 140-307 |
| Cow position: | chr11:41293708-41293873 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 140-307 |
| Cow position: | chr11:48272312-48272146 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 144-281 |
| Cow position: | chr11:44636649-44636783 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 144-303 |
| Cow position: | chr11:36328932-36329086 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 145-298 |
| Cow position: | chr11:62150787-62150937 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 147-307 |
| Cow position: | chr11:16342124-16342284 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 147-312 |
| Cow position: | chr11:34413237-34413401 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 135, 13 |
| Conread position: | 149-299 |
| Cow position: | chr11:65767301-65767152 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 152-298 |
| Cow position: | chr11:23128442-23128586 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 155-307 |
| Cow position: | chr11:10213472-10213619 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 157-308 |
| Cow position: | chr11:53553310-53553163 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 184-304 |
| Cow position: | chr11:47545199-47545082 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 184-350 |
| Cow position: | chr11:36914659-36914826 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 187-306 |
| Cow position: | chr11:54218779-54218662 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 194-292 |
| Cow position: | chr11:16842926-16843024 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 77, 87 |
| Conread position: | 194-293 |
| Cow position: | chr11:24937723-24937624 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 194-301 |
| Cow position: | chr11:42452878-42452981 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
Show alignments to all cow chromosomes.