Cow genome map

Conread name: rsto206_k11.y1

Conread position: 44-299
Cow position: chr12:3371362-3371610 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 48-202
Cow position: chr12:3579672-3579513 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 118

Conread position: 51-306
Cow position: chr12:25917097-25917346 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 11

Conread position: 53-297
Cow position: chr12:6410558-6410801 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 57

Conread position: 59-293
Cow position: chr12:17080440-17080198 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 91

Conread position: 60-277
Cow position: chr12:24166779-24166990 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 60-305
Cow position: chr12:15429425-15429670 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 41

Conread position: 61-302
Cow position: chr12:4720116-4719876 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 162
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 76

Conread position: 65-303
Cow position: chr12:6241491-6241249 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 235

Conread position: 65-304
Cow position: chr12:39486597-39486351 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 66-306
Cow position: chr12:11660092-11659853 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 147

Conread position: 67-299
Cow position: chr12:17269965-17269734 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 20, 94

Conread position: 68-269
Cow position: chr12:29316298-29316501 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 71

Conread position: 68-278
Cow position: chr12:43855052-43854847 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 68-302
Cow position: chr12:38851859-38852102 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 21

Conread position: 68-304
Cow position: chr12:16670430-16670193 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 33

Conread position: 68-310
Cow position: chr12:36790650-36790890 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 162
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 94

Conread position: 69-293
Cow position: chr12:9482139-9482369 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 126

Conread position: 69-305
Cow position: chr12:10942457-10942213 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 162
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 134

Conread position: 69-306
Cow position: chr12:24663279-24663039 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 78, 18

Conread position: 69-307
Cow position: chr12:15089679-15089439 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 10, 87

Conread position: 69-309
Cow position: chr12:38774082-38774320 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 10, 68

Conread position: 69-319
Cow position: chr12:16493192-16493452 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 173
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 119

Conread position: 69-326
Cow position: chr12:34333279-34333019 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 10, 103

Conread position: 70-227
Cow position: chr12:2835565-2835407 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 92

Conread position: 70-250
Cow position: chr12:31602660-31602841 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 88

Conread position: 70-299
Cow position: chr12:42784469-42784241 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 30

Conread position: 70-300
Cow position: chr12:5839501-5839725 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 123, 29

Conread position: 70-303
Cow position: chr12:17882017-17881790 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 64

Conread position: 70-303
Cow position: chr12:18518834-18518601 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 9, 90

Conread position: 70-306
Cow position: chr12:7884518-7884757 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 70-306
Cow position: chr12:17031771-17031540 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 57

Conread position: 70-306
Cow position: chr12:20776767-20776998 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 9, 84

Conread position: 70-307
Cow position: chr12:9766719-9766956 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 31

Conread position: 70-309
Cow position: chr12:5554175-5554411 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 9, 74

Conread position: 70-318
Cow position: chr12:21780324-21780073 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 239

Conread position: 71-272
Cow position: chr12:2964207-2964009 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 93

Conread position: 71-276
Cow position: chr12:48578996-48578798 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 68

Conread position: 71-281
Cow position: chr12:2734750-2734958 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 8, 68

Conread position: 71-283
Cow position: chr12:5459411-5459197 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 113

Conread position: 71-298
Cow position: chr12:16605508-16605740 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 63

Conread position: 71-300
Cow position: chr12:18123827-18123600 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 8, 79

Conread position: 71-303
Cow position: chr12:17879144-17879372 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 8, 68

Conread position: 71-303
Cow position: chr12:22284961-22285196 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 93

Conread position: 71-304
Cow position: chr12:17252042-17252271 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 8, 63

Conread position: 71-304
Cow position: chr12:29057551-29057316 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 8, 95

Conread position: 71-306
Cow position: chr12:25561527-25561295 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 8, 73

Conread position: 71-307
Cow position: chr12:18582838-18583067 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 8, 30

Conread position: 71-307
Cow position: chr12:19261356-19261119 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 8, 73

Conread position: 71-309
Cow position: chr12:24032647-24032417 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 233, 23

Conread position: 71-310
Cow position: chr12:30590927-30590685 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 40, 10

Conread position: 72-305
Cow position: chr12:12233041-12232809 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 7, 90

Conread position: 78-281
Cow position: chr12:25814309-25814097 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 110

Conread position: 80-247
Cow position: chr12:19272540-19272705 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 80-256
Cow position: chr12:4512301-4512475 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 88

Conread position: 80-266
Cow position: chr12:29731461-29731279 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 80-276
Cow position: chr12:14986897-14986704 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 83, 0

Conread position: 80-277
Cow position: chr12:23714822-23714628 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 194, 57

Conread position: 80-284
Cow position: chr12:33949050-33948851 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 80-291
Cow position: chr12:42630885-42631098 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 105

Conread position: 80-292
Cow position: chr12:9143534-9143327 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 69, 19

Conread position: 80-292
Cow position: chr12:42879849-42879633 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 57, 86

Conread position: 80-293
Cow position: chr12:11587919-11587712 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 80-293
Cow position: chr12:45092590-45092384 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 26, 58

Conread position: 80-299
Cow position: chr12:36544495-36544709 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 174, 63

Conread position: 80-302
Cow position: chr12:5135382-5135163 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 147
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 80-302
Cow position: chr12:24116223-24116434 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 211, 56

Conread position: 80-303
Cow position: chr12:18420771-18420994 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 96

Conread position: 80-303
Cow position: chr12:18513776-18514000 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 65, 122

Conread position: 80-305
Cow position: chr12:26576042-26575820 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 211, 57

Conread position: 80-305
Cow position: chr12:37169799-37170020 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 19, 0

Conread position: 80-306
Cow position: chr12:11057016-11056799 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 132, 23

Conread position: 80-307
Cow position: chr12:7902655-7902881 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 169, 71

Conread position: 80-317
Cow position: chr12:30745866-30745634 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 207, 83

Conread position: 81-306
Cow position: chr12:26777045-26777264 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 0

Conread position: 82-333
Cow position: chr12:15703347-15703600 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 171
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 71, 25

Conread position: 83-250
Cow position: chr12:6958366-6958200 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 97, 82

Conread position: 83-266
Cow position: chr12:6480789-6480605 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 83-278
Cow position: chr12:24437485-24437682 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 83-296
Cow position: chr12:36261841-36261624 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 66, 100

Conread position: 85-282
Cow position: chr12:15122470-15122273 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 164, 77

Conread position: 86-309
Cow position: chr12:33851500-33851284 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 72, 0

Conread position: 89-273
Cow position: chr12:31547741-31547556 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 100

Conread position: 91-300
Cow position: chr12:5631745-5631947 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 28

Conread position: 107-317
Cow position: chr12:37770989-37770792 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 128-308
Cow position: chr12:27037347-27037527 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 131-293
Cow position: chr12:15260864-15260701 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 55

Conread position: 137-307
Cow position: chr12:45820274-45820442 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 22

Conread position: 140-298
Cow position: chr12:19274309-19274464 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 140-299
Cow position: chr12:33319579-33319734 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 140-302
Cow position: chr12:46463977-46464137 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 50

Conread position: 140-304
Cow position: chr12:46120742-46120908 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 23

Conread position: 140-316
Cow position: chr12:19502341-19502513 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 141-299
Cow position: chr12:27357477-27357320 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 146-293
Cow position: chr12:25177515-25177658 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 147-303
Cow position: chr12:23644721-23644876 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 13

Conread position: 163-293
Cow position: chr12:30819312-30819182 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 164-304
Cow position: chr12:5906123-5905983 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 164-305
Cow position: chr12:18577907-18577765 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 164-306
Cow position: chr12:15641040-15641183 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 165-302
Cow position: chr12:19507703-19507568 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 194-296
Cow position: chr12:15240701-15240803 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.