Cow genome map
| Conread name: | rsto206_k11.y1 |
| Conread position: | 48-305 |
| Cow position: | chr14:24236642-24236903 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 60-304 |
| Cow position: | chr14:15492427-15492671 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 94, 17 |
| Conread position: | 62-283 |
| Cow position: | chr14:28694884-28694660 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 63-308 |
| Cow position: | chr14:22988870-22989114 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 16, 101 |
| Conread position: | 66-237 |
| Cow position: | chr14:15228384-15228550 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 66-276 |
| Cow position: | chr14:36151162-36151370 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 97 |
| Conread position: | 68-282 |
| Cow position: | chr14:23078952-23078737 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 84 |
| Conread position: | 68-284 |
| Cow position: | chr14:15470146-15469925 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 166 |
| Conread position: | 68-292 |
| Cow position: | chr14:18301797-18302026 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 68-299 |
| Cow position: | chr14:18941445-18941214 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 78, 10 |
| Conread position: | 68-303 |
| Cow position: | chr14:18345885-18345656 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 5, 63 |
| Conread position: | 68-303 |
| Cow position: | chr14:28115349-28115111 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 51, 120 |
| Conread position: | 68-305 |
| Cow position: | chr14:26655297-26655057 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 121 |
| Conread position: | 68-306 |
| Cow position: | chr14:41749916-41749681 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 11, 88 |
| Conread position: | 68-307 |
| Cow position: | chr14:49824773-49824543 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 68-308 |
| Cow position: | chr14:25225573-25225809 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 69-298 |
| Cow position: | chr14:40191437-40191656 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 69-306 |
| Cow position: | chr14:7198336-7198575 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 10, 112 |
| Conread position: | 69-308 |
| Cow position: | chr14:11643405-11643176 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 10, 71 |
| Conread position: | 69-318 |
| Cow position: | chr14:28304946-28304689 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 10, 118 |
| Conread position: | 70-237 |
| Cow position: | chr14:8949493-8949660 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 89 |
| Conread position: | 70-246 |
| Cow position: | chr14:11280268-11280094 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 70-290 |
| Cow position: | chr14:10706722-10706938 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 70-301 |
| Cow position: | chr14:29964859-29965093 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 118 |
| Conread position: | 70-302 |
| Cow position: | chr14:13042601-13042830 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 9, 70 |
| Conread position: | 70-303 |
| Cow position: | chr14:29734517-29734288 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 11, 26 |
| Conread position: | 70-304 |
| Cow position: | chr14:20826333-20826565 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 9, 84 |
| Conread position: | 70-305 |
| Cow position: | chr14:21224485-21224716 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 9, 94 |
| Conread position: | 70-306 |
| Cow position: | chr14:10851869-10852111 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 9, 99 |
| Conread position: | 70-308 |
| Cow position: | chr14:36166782-36167017 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 116 |
| Conread position: | 70-308 |
| Cow position: | chr14:48838433-48838676 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 70-309 |
| Cow position: | chr14:21933501-21933262 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 88, 228 |
| Conread position: | 70-310 |
| Cow position: | chr14:20640787-20640546 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 70-310 |
| Cow position: | chr14:33247576-33247346 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 71-284 |
| Cow position: | chr14:11729264-11729053 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 8, 80 |
| Conread position: | 71-291 |
| Cow position: | chr14:11576912-11577132 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 8, 96 |
| Conread position: | 71-300 |
| Cow position: | chr14:47170507-47170283 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 8, 66 |
| Conread position: | 71-303 |
| Cow position: | chr14:12033402-12033165 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 8, 93 |
| Conread position: | 71-304 |
| Cow position: | chr14:10078097-10078346 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 71-304 |
| Cow position: | chr14:10937513-10937757 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 8, 117 |
| Conread position: | 71-305 |
| Cow position: | chr14:4848193-4848426 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 8, 27 |
| Conread position: | 71-307 |
| Cow position: | chr14:26442503-26442265 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 8, 166 |
| Conread position: | 72-306 |
| Cow position: | chr14:13845835-13846064 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 76-306 |
| Cow position: | chr14:3949255-3949022 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 111 |
| Conread position: | 80-300 |
| Cow position: | chr14:34775895-34775672 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 64, 107 |
| Conread position: | 80-300 |
| Cow position: | chr14:36254835-36254623 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 80-302 |
| Cow position: | chr14:20466790-20467006 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 98, 88 |
| Conread position: | 80-304 |
| Cow position: | chr14:48426926-48427148 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 82, 149 |
| Conread position: | 80-306 |
| Cow position: | chr14:16550140-16549925 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 111, 19 |
| Conread position: | 80-307 |
| Cow position: | chr14:16524323-16524553 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 119, 12 |
| Conread position: | 80-309 |
| Cow position: | chr14:13731243-13731016 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 123, 62 |
| Conread position: | 80-310 |
| Cow position: | chr14:25228001-25228224 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 82-282 |
| Cow position: | chr14:21357413-21357610 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 83-242 |
| Cow position: | chr14:32784261-32784100 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 83-260 |
| Cow position: | chr14:27848036-27848217 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 83-266 |
| Cow position: | chr14:41156863-41156685 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 83-299 |
| Cow position: | chr14:26433392-26433171 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 57, 218 |
| Conread position: | 83-300 |
| Cow position: | chr14:21535446-21535233 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 87, 61 |
| Conread position: | 83-302 |
| Cow position: | chr14:33714817-33714604 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 83-302 |
| Cow position: | chr14:43868163-43868384 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 49, 105 |
| Conread position: | 83-303 |
| Cow position: | chr14:42155110-42154897 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 92, 54 |
| Conread position: | 83-304 |
| Cow position: | chr14:16760256-16760476 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 70, 51 |
| Conread position: | 83-304 |
| Cow position: | chr14:45677088-45677306 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 84, 61 |
| Conread position: | 83-306 |
| Cow position: | chr14:41838002-41837791 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 214, 37 |
| Conread position: | 83-309 |
| Cow position: | chr14:23104139-23103919 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 108, 60 |
| Conread position: | 84-306 |
| Cow position: | chr14:24945636-24945410 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 69, 15 |
| Conread position: | 84-308 |
| Cow position: | chr14:33791051-33791268 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 85-303 |
| Cow position: | chr14:1646325-1646110 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 112, 22 |
| Conread position: | 85-303 |
| Cow position: | chr14:25903391-25903607 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 85-308 |
| Cow position: | chr14:20110862-20110642 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 88-260 |
| Cow position: | chr14:20736476-20736644 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 111-304 |
| Cow position: | chr14:2541215-2541023 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 134, 24 |
| Conread position: | 129-299 |
| Cow position: | chr14:15055089-15054919 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 142, 152 |
| Conread position: | 138-298 |
| Cow position: | chr14:38338220-38338063 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 140-304 |
| Cow position: | chr14:41210772-41210932 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 12 |
| Conread position: | 140-308 |
| Cow position: | chr14:34096650-34096486 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 20 |
| Conread position: | 156-291 |
| Cow position: | chr14:19487224-19487359 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 157-308 |
| Cow position: | chr14:9308160-9308312 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 144, 97 |
| Conread position: | 157-308 |
| Cow position: | chr14:27592026-27591876 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 162-304 |
| Cow position: | chr14:2038873-2038732 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 164-310 |
| Cow position: | chr14:19372276-19372422 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 184-298 |
| Cow position: | chr14:20349769-20349658 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 189-303 |
| Cow position: | chr14:24796471-24796357 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 194-307 |
| Cow position: | chr14:2345034-2345147 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.