Cow genome map

Conread name: rsto206_k11.y1

Conread position: 59-306
Cow position: chr15:40834992-40835240 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 18, 95

Conread position: 61-292
Cow position: chr15:26442094-26442327 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 18, 0

Conread position: 61-293
Cow position: chr15:2931691-2931453 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 100

Conread position: 61-293
Cow position: chr15:20081655-20081884 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 94

Conread position: 62-284
Cow position: chr15:19002401-19002172 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 62-297
Cow position: chr15:24982300-24982061 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 74

Conread position: 62-298
Cow position: chr15:7751030-7750793 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 16

Conread position: 63-293
Cow position: chr15:17762794-17763017 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 65-266
Cow position: chr15:41534540-41534736 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 73

Conread position: 65-270
Cow position: chr15:34223752-34223956 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 34

Conread position: 66-303
Cow position: chr15:25208874-25208634 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 67-302
Cow position: chr15:14576216-14576450 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 12, 36

Conread position: 68-284
Cow position: chr15:44671452-44671231 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 32

Conread position: 68-300
Cow position: chr15:795131-794901 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 7, 70

Conread position: 68-300
Cow position: chr15:22532141-22532368 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 13, 70

Conread position: 68-305
Cow position: chr15:26158712-26158474 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 178

Conread position: 68-308
Cow position: chr15:36846300-36846047 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 176

Conread position: 68-318
Cow position: chr15:19554039-19553781 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 11, 100

Conread position: 69-247
Cow position: chr15:17124583-17124401 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 10, 119

Conread position: 69-267
Cow position: chr15:36422508-36422699 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 69-269
Cow position: chr15:848535-848736 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 10, 32

Conread position: 69-303
Cow position: chr15:13395433-13395670 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 24, 106

Conread position: 69-303
Cow position: chr15:20391389-20391155 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 10, 37

Conread position: 69-310
Cow position: chr15:662576-662336 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 10, 68

Conread position: 69-310
Cow position: chr15:24616455-24616704 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 168
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 228

Conread position: 69-310
Cow position: chr15:38652715-38652469 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 16, 97

Conread position: 70-281
Cow position: chr15:38827426-38827223 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 66

Conread position: 70-283
Cow position: chr15:11909058-11908848 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 138

Conread position: 70-291
Cow position: chr15:36952310-36952093 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 9, 31

Conread position: 70-299
Cow position: chr15:41056318-41056085 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 58, 29

Conread position: 70-299
Cow position: chr15:49784390-49784166 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 70-303
Cow position: chr15:46563588-46563364 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 69

Conread position: 70-304
Cow position: chr15:30986397-30986171 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 59

Conread position: 70-305
Cow position: chr15:225912-225680 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 71, 84

Conread position: 70-305
Cow position: chr15:16112283-16112525 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 161
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 70-306
Cow position: chr15:36259708-36259477 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 9, 60

Conread position: 70-306
Cow position: chr15:53716325-53716560 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 100, 0

Conread position: 70-307
Cow position: chr15:4694640-4694870 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 20

Conread position: 70-311
Cow position: chr15:43626353-43626601 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 71-276
Cow position: chr15:49483519-49483724 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 10

Conread position: 71-293
Cow position: chr15:31929008-31928783 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 150
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 71-303
Cow position: chr15:13432372-13432607 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 228

Conread position: 71-303
Cow position: chr15:30471089-30470849 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 8, 218

Conread position: 71-308
Cow position: chr15:47844198-47843965 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 8, 26

Conread position: 71-308
Cow position: chr15:52316950-52317183 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 10, 68

Conread position: 71-309
Cow position: chr15:14987885-14988117 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 8, 66

Conread position: 71-310
Cow position: chr15:36435092-36435337 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 95

Conread position: 73-283
Cow position: chr15:26079452-26079251 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 76-306
Cow position: chr15:14888740-14888519 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 0

Conread position: 79-250
Cow position: chr15:48052698-48052534 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 96, 20

Conread position: 79-308
Cow position: chr15:13701872-13701642 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 118

Conread position: 80-264
Cow position: chr15:28099013-28099196 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 80-277
Cow position: chr15:26896798-26896597 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 80-285
Cow position: chr15:43715231-43715429 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 158, 55

Conread position: 80-287
Cow position: chr15:41475926-41475724 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 80-291
Cow position: chr15:12304540-12304749 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 80-291
Cow position: chr15:36887740-36887946 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 72, 0

Conread position: 80-293
Cow position: chr15:49131960-49132171 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 62, 0

Conread position: 80-296
Cow position: chr15:9879479-9879261 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 86, 19

Conread position: 80-298
Cow position: chr15:608044-608264 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 146
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 107

Conread position: 80-298
Cow position: chr15:41125656-41125454 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 80-302
Cow position: chr15:3695538-3695754 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 57, 0

Conread position: 80-304
Cow position: chr15:50332876-50333105 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 155

Conread position: 80-305
Cow position: chr15:22553640-22553417 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 80-306
Cow position: chr15:24967702-24967913 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 80-306
Cow position: chr15:24994610-24994387 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 80-306
Cow position: chr15:47042742-47042502 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 80-308
Cow position: chr15:10442610-10442379 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 179

Conread position: 80-310
Cow position: chr15:11011692-11011472 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 224, 25

Conread position: 80-319
Cow position: chr15:13783067-13782825 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 61, 108

Conread position: 81-255
Cow position: chr15:46284014-46283842 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 73, 0

Conread position: 81-298
Cow position: chr15:8353943-8354159 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 71, 0

Conread position: 81-304
Cow position: chr15:244684-244905 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 75, 30

Conread position: 83-261
Cow position: chr15:14964256-14964086 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 83-269
Cow position: chr15:15992737-15992554 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 22

Conread position: 83-303
Cow position: chr15:26851320-26851105 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 156, 54

Conread position: 83-304
Cow position: chr15:25906822-25907033 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 211, 54

Conread position: 83-307
Cow position: chr15:5420978-5420759 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 146, 68

Conread position: 83-307
Cow position: chr15:27063613-27063394 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 185, 13

Conread position: 83-307
Cow position: chr15:51307766-51307553 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 218, 47

Conread position: 84-306
Cow position: chr15:23696997-23696785 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 140, 53

Conread position: 85-293
Cow position: chr15:33642996-33643203 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 8, 77

Conread position: 85-308
Cow position: chr15:33306026-33306237 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 85-319
Cow position: chr15:23275439-23275680 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 50, 118

Conread position: 86-304
Cow position: chr15:2953226-2953009 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 76

Conread position: 88-293
Cow position: chr15:36353578-36353781 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 108-284
Cow position: chr15:17337298-17337466 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 128-293
Cow position: chr15:40594557-40594392 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 137-302
Cow position: chr15:11912600-11912437 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 49

Conread position: 137-307
Cow position: chr15:26718963-26718796 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 140-302
Cow position: chr15:25650448-25650291 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 140-306
Cow position: chr15:42789186-42789021 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 144, 22

Conread position: 140-307
Cow position: chr15:34751049-34751212 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 141-306
Cow position: chr15:10563542-10563377 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 24, 88

Conread position: 148-293
Cow position: chr15:44237384-44237530 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 152-303
Cow position: chr15:16908407-16908555 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 155-295
Cow position: chr15:16307397-16307537 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 155-304
Cow position: chr15:37284428-37284578 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 138, 0

Conread position: 163-307
Cow position: chr15:78557-78698 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 38, 28

Conread position: 170-306
Cow position: chr15:26404273-26404408 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 187-299
Cow position: chr15:13515373-13515485 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.