Cow genome map
| Conread name: | rsto206_k11.y1 |
| Conread position: | 16-307 |
| Cow position: | chr20:13269911-13269627 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 22, 121 |
| Conread position: | 46-304 |
| Cow position: | chr20:2819815-2819553 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 25, 146 |
| Conread position: | 59-266 |
| Cow position: | chr20:13805572-13805362 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 79 |
| Conread position: | 61-261 |
| Cow position: | chr20:2316175-2316374 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 92 |
| Conread position: | 66-293 |
| Cow position: | chr20:7737987-7738212 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 13, 87 |
| Conread position: | 68-304 |
| Cow position: | chr20:38515034-38514788 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 11, 131 |
| Conread position: | 68-307 |
| Cow position: | chr20:15548648-15548892 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 7, 32 |
| Conread position: | 68-308 |
| Cow position: | chr20:28982940-28982706 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 68-309 |
| Cow position: | chr20:16941037-16941283 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 11, 185 |
| Conread position: | 69-291 |
| Cow position: | chr20:32847587-32847366 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 10, 78 |
| Conread position: | 69-299 |
| Cow position: | chr20:29845299-29845064 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 121 |
| Conread position: | 69-310 |
| Cow position: | chr20:4755590-4755832 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 94 |
| Conread position: | 70-263 |
| Cow position: | chr20:27407652-27407838 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 28 |
| Conread position: | 70-282 |
| Cow position: | chr20:12126058-12126274 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 70-299 |
| Cow position: | chr20:39398724-39398495 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 226 |
| Conread position: | 70-303 |
| Cow position: | chr20:22065304-22065081 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 9, 84 |
| Conread position: | 70-303 |
| Cow position: | chr20:33623316-33623543 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 70 |
| Conread position: | 70-304 |
| Cow position: | chr20:14980264-14980501 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 91 |
| Conread position: | 70-304 |
| Cow position: | chr20:33067119-33067351 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 88, 14 |
| Conread position: | 70-306 |
| Cow position: | chr20:5950397-5950638 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 220 |
| Conread position: | 70-306 |
| Cow position: | chr20:14620065-14620296 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 129, 80 |
| Conread position: | 70-307 |
| Cow position: | chr20:18379620-18379383 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 70-314 |
| Cow position: | chr20:26996777-26996527 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 9, 127 |
| Conread position: | 71-258 |
| Cow position: | chr20:4891876-4892065 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 71-258 |
| Cow position: | chr20:19201776-19201585 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 8, 128 |
| Conread position: | 71-266 |
| Cow position: | chr20:19834589-19834784 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 59 |
| Conread position: | 71-284 |
| Cow position: | chr20:3564395-3564188 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 8, 75 |
| Conread position: | 71-285 |
| Cow position: | chr20:36312271-36312481 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 37, 58 |
| Conread position: | 71-302 |
| Cow position: | chr20:8556028-8556258 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 8, 90 |
| Conread position: | 71-304 |
| Cow position: | chr20:398070-398297 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 8, 68 |
| Conread position: | 71-304 |
| Cow position: | chr20:2298555-2298778 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 71-304 |
| Cow position: | chr20:23846423-23846657 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 8, 93 |
| Conread position: | 71-307 |
| Cow position: | chr20:8578495-8578254 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 71-310 |
| Cow position: | chr20:21428400-21428159 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 94 |
| Conread position: | 72-277 |
| Cow position: | chr20:19635937-19636141 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 7, 82 |
| Conread position: | 72-306 |
| Cow position: | chr20:20158372-20158142 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 7, 79 |
| Conread position: | 74-267 |
| Cow position: | chr20:20590068-20590256 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 74-304 |
| Cow position: | chr20:7425962-7426189 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 226, 7 |
| Conread position: | 76-306 |
| Cow position: | chr20:15530100-15529868 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 11, 152 |
| Conread position: | 80-284 |
| Cow position: | chr20:39268851-39269057 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 28, 101 |
| Conread position: | 80-293 |
| Cow position: | chr20:35444875-35445084 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 80-296 |
| Cow position: | chr20:2204455-2204669 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 63, 84 |
| Conread position: | 80-297 |
| Cow position: | chr20:12420388-12420603 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 80-299 |
| Cow position: | chr20:24097226-24097014 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 80-299 |
| Cow position: | chr20:25009402-25009618 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 80-301 |
| Cow position: | chr20:11751885-11751667 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 75, 108 |
| Conread position: | 80-302 |
| Cow position: | chr20:12581725-12581944 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 80-303 |
| Cow position: | chr20:8547291-8547076 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 221, 25 |
| Conread position: | 80-304 |
| Cow position: | chr20:3255265-3255047 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 106, 68 |
| Conread position: | 80-304 |
| Cow position: | chr20:24070033-24069814 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 80-305 |
| Cow position: | chr20:3148912-3148691 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 80-305 |
| Cow position: | chr20:28441550-28441334 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 77 |
| Conread position: | 80-305 |
| Cow position: | chr20:40177475-40177253 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 80-306 |
| Cow position: | chr20:7624028-7624242 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 80-307 |
| Cow position: | chr20:10200580-10200350 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 117 |
| Conread position: | 80-309 |
| Cow position: | chr20:7438626-7438848 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 80-310 |
| Cow position: | chr20:6240289-6240522 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 94, 104 |
| Conread position: | 82-270 |
| Cow position: | chr20:26040868-26041056 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 83-247 |
| Cow position: | chr20:27323497-27323331 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 81 |
| Conread position: | 83-282 |
| Cow position: | chr20:14880014-14879819 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 108, 68 |
| Conread position: | 83-285 |
| Cow position: | chr20:24314809-24315006 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 83-301 |
| Cow position: | chr20:28605434-28605221 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 83-302 |
| Cow position: | chr20:31739989-31740209 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 54, 10 |
| Conread position: | 83-305 |
| Cow position: | chr20:14807111-14806894 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 83-306 |
| Cow position: | chr20:25161903-25162122 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 180, 35 |
| Conread position: | 83-308 |
| Cow position: | chr20:5702950-5702730 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 45, 55 |
| Conread position: | 84-306 |
| Cow position: | chr20:38090143-38089918 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 69, 107 |
| Conread position: | 86-305 |
| Cow position: | chr20:38925624-38925845 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 58, 101 |
| Conread position: | 98-306 |
| Cow position: | chr20:16935102-16935305 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 9, 37 |
| Conread position: | 101-290 |
| Cow position: | chr20:19060630-19060815 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 153, 58 |
| Conread position: | 101-296 |
| Cow position: | chr20:15766322-15766127 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 138, 186 |
| Conread position: | 107-304 |
| Cow position: | chr20:20203418-20203227 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 109-273 |
| Cow position: | chr20:630726-630564 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 109-302 |
| Cow position: | chr20:32463323-32463510 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 159, 42 |
| Conread position: | 116-303 |
| Cow position: | chr20:17100553-17100372 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 137-305 |
| Cow position: | chr20:22978504-22978335 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 162 |
| Conread position: | 138-302 |
| Cow position: | chr20:9412663-9412498 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 140-308 |
| Cow position: | chr20:38768293-38768456 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 140-314 |
| Cow position: | chr20:21815731-21815557 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 157, 22 |
| Conread position: | 145-304 |
| Cow position: | chr20:8912334-8912490 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 123, 17 |
| Conread position: | 163-314 |
| Cow position: | chr20:23792753-23792603 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 141, 119 |
| Conread position: | 165-293 |
| Cow position: | chr20:8817344-8817472 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 184-306 |
| Cow position: | chr20:1009578-1009700 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.