Cow genome map
| Conread name: | rsto206_k11.y1 |
| Conread position: | 56-299 |
| Cow position: | chr24:18356863-18357106 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 59-309 |
| Cow position: | chr24:17104384-17104632 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 60-241 |
| Cow position: | chr24:24091149-24091336 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 65-307 |
| Cow position: | chr24:17311048-17311279 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 68-267 |
| Cow position: | chr24:6887185-6886989 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 5, 70 |
| Conread position: | 68-289 |
| Cow position: | chr24:42688020-42687804 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 6, 73 |
| Conread position: | 68-296 |
| Cow position: | chr24:13948300-13948072 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 11, 43 |
| Conread position: | 68-301 |
| Cow position: | chr24:27348998-27349231 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 68-303 |
| Cow position: | chr24:33372724-33372495 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 69 |
| Conread position: | 68-308 |
| Cow position: | chr24:31812363-31812127 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 79 |
| Conread position: | 68-311 |
| Cow position: | chr24:11840362-11840120 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 43 |
| Conread position: | 68-316 |
| Cow position: | chr24:36286747-36286497 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 85 |
| Conread position: | 69-240 |
| Cow position: | chr24:25947682-25947857 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 119 |
| Conread position: | 69-303 |
| Cow position: | chr24:42984572-42984334 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 113 |
| Conread position: | 69-304 |
| Cow position: | chr24:35675708-35675480 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 12, 77 |
| Conread position: | 69-318 |
| Cow position: | chr24:22689396-22689658 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 69-320 |
| Cow position: | chr24:18755937-18755675 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 10, 119 |
| Conread position: | 70-226 |
| Cow position: | chr24:21656584-21656425 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 70-266 |
| Cow position: | chr24:36775595-36775798 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 57 |
| Conread position: | 70-273 |
| Cow position: | chr24:3412857-3412655 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 70-278 |
| Cow position: | chr24:7757945-7757739 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 9, 69 |
| Conread position: | 70-296 |
| Cow position: | chr24:19187108-19186891 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 9, 81 |
| Conread position: | 70-298 |
| Cow position: | chr24:19000219-18999994 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 9, 96 |
| Conread position: | 70-301 |
| Cow position: | chr24:230456-230224 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 9, 69 |
| Conread position: | 70-304 |
| Cow position: | chr24:2402201-2402426 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 9, 46 |
| Conread position: | 70-304 |
| Cow position: | chr24:37974807-37975041 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 11, 70 |
| Conread position: | 70-306 |
| Cow position: | chr24:18474553-18474791 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 9, 84 |
| Conread position: | 70-306 |
| Cow position: | chr24:20364240-20364470 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 9, 54 |
| Conread position: | 70-306 |
| Cow position: | chr24:39523276-39523508 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 70-307 |
| Cow position: | chr24:10499394-10499152 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 159 |
| Conread position: | 70-307 |
| Cow position: | chr24:40301336-40301099 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 9, 126 |
| Conread position: | 71-291 |
| Cow position: | chr24:30236047-30235827 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 8, 162 |
| Conread position: | 71-297 |
| Cow position: | chr24:29984815-29985037 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 8, 68 |
| Conread position: | 71-303 |
| Cow position: | chr24:27844358-27844586 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 8, 85 |
| Conread position: | 71-304 |
| Cow position: | chr24:5142113-5141885 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 8, 30 |
| Conread position: | 71-308 |
| Cow position: | chr24:28303187-28303428 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 8, 98 |
| Conread position: | 71-314 |
| Cow position: | chr24:28510966-28510729 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 10, 78 |
| Conread position: | 72-304 |
| Cow position: | chr24:27607937-27608157 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 7, 81 |
| Conread position: | 72-305 |
| Cow position: | chr24:11887327-11887099 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 7, 29 |
| Conread position: | 74-309 |
| Cow position: | chr24:28043164-28042910 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 78-307 |
| Cow position: | chr24:43028162-43028392 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 79, 174 |
| Conread position: | 80-277 |
| Cow position: | chr24:29539766-29539961 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 80-284 |
| Cow position: | chr24:25122501-25122306 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 80-284 |
| Cow position: | chr24:29561415-29561612 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 80-290 |
| Cow position: | chr24:21834799-21835004 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 80-293 |
| Cow position: | chr24:37651885-37651677 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 28, 58 |
| Conread position: | 80-299 |
| Cow position: | chr24:27713246-27713459 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 80-300 |
| Cow position: | chr24:23694747-23694961 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 110, 19 |
| Conread position: | 80-304 |
| Cow position: | chr24:28234205-28233986 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 28, 74 |
| Conread position: | 80-304 |
| Cow position: | chr24:37650839-37650616 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 95, 57 |
| Conread position: | 80-305 |
| Cow position: | chr24:1269941-1269726 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 80-307 |
| Cow position: | chr24:5360875-5360657 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 80-308 |
| Cow position: | chr24:42175689-42175468 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 159, 79 |
| Conread position: | 80-309 |
| Cow position: | chr24:18484829-18485057 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 55, 106 |
| Conread position: | 80-319 |
| Cow position: | chr24:27630563-27630325 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 106 |
| Conread position: | 81-308 |
| Cow position: | chr24:31816738-31816516 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 83-302 |
| Cow position: | chr24:3165980-3165762 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 81, 10 |
| Conread position: | 83-305 |
| Cow position: | chr24:37823685-37823468 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 83-307 |
| Cow position: | chr24:41916418-41916191 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 108, 69 |
| Conread position: | 83-309 |
| Cow position: | chr24:2992719-2992944 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 64, 101 |
| Conread position: | 83-314 |
| Cow position: | chr24:43371404-43371173 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 204, 82 |
| Conread position: | 84-304 |
| Cow position: | chr24:15288987-15288768 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 94, 76 |
| Conread position: | 84-306 |
| Cow position: | chr24:27284984-27284759 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 62, 151 |
| Conread position: | 85-293 |
| Cow position: | chr24:28496423-28496630 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 104, 75 |
| Conread position: | 86-303 |
| Cow position: | chr24:30313871-30314084 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 87-298 |
| Cow position: | chr24:22133322-22133118 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 88-306 |
| Cow position: | chr24:24490869-24491076 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 95-310 |
| Cow position: | chr24:28990711-28990494 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 75 |
| Conread position: | 107-296 |
| Cow position: | chr24:20874817-20874631 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 108-305 |
| Cow position: | chr24:31359454-31359259 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 187, 36 |
| Conread position: | 111-306 |
| Cow position: | chr24:27725878-27726072 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 137-305 |
| Cow position: | chr24:28689776-28689605 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 108, 151 |
| Conread position: | 137-306 |
| Cow position: | chr24:23186810-23186982 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 138-303 |
| Cow position: | chr24:39791647-39791483 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 138-304 |
| Cow position: | chr24:5754940-5754777 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 138-304 |
| Cow position: | chr24:14457619-14457780 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 140-306 |
| Cow position: | chr24:37038007-37037839 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 154-306 |
| Cow position: | chr24:15246552-15246703 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 143, 0 |
Show alignments to all cow chromosomes.