Cow genome map

Conread name: rsto206_k11.y1

Conread position: 35-277
Cow position: chr27:24693140-24693377 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 35

Conread position: 60-299
Cow position: chr27:26999676-26999436 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 21, 120

Conread position: 60-304
Cow position: chr27:28206549-28206791 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 80

Conread position: 61-306
Cow position: chr27:22035621-22035382 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 226, 9

Conread position: 61-310
Cow position: chr27:31231330-31231087 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 64-303
Cow position: chr27:7412144-7412383 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 17, 98

Conread position: 65-308
Cow position: chr27:19685956-19685718 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 0

Conread position: 66-293
Cow position: chr27:23890687-23890918 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 66-302
Cow position: chr27:21669358-21669128 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 52, 95

Conread position: 66-303
Cow position: chr27:6319677-6319910 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 235, 71

Conread position: 68-284
Cow position: chr27:10307549-10307329 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 172

Conread position: 68-293
Cow position: chr27:426724-426949 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 11, 94

Conread position: 68-303
Cow position: chr27:27740539-27740303 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 103

Conread position: 68-303
Cow position: chr27:31210304-31210536 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 11, 94

Conread position: 68-304
Cow position: chr27:14670626-14670391 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 78

Conread position: 68-307
Cow position: chr27:23452217-23452458 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 11, 94

Conread position: 68-307
Cow position: chr27:26226532-26226291 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 217, 91

Conread position: 68-309
Cow position: chr27:22171057-22171293 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 13, 74

Conread position: 68-318
Cow position: chr27:19500482-19500226 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 169
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 120

Conread position: 68-332
Cow position: chr27:23594073-23594336 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 159

Conread position: 69-299
Cow position: chr27:19508767-19508999 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 10, 0

Conread position: 69-306
Cow position: chr27:28496615-28496379 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 10, 147

Conread position: 69-308
Cow position: chr27:11982893-11982649 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 97

Conread position: 69-308
Cow position: chr27:16786586-16786825 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 75

Conread position: 69-310
Cow position: chr27:19387778-19388016 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 62, 30

Conread position: 70-237
Cow position: chr27:22748084-22748251 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 92

Conread position: 70-239
Cow position: chr27:26087076-26087242 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 31

Conread position: 70-240
Cow position: chr27:31183329-31183503 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 16

Conread position: 70-266
Cow position: chr27:10581292-10581482 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 139, 0

Conread position: 70-266
Cow position: chr27:11208801-11208602 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 104

Conread position: 70-267
Cow position: chr27:11133844-11134040 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 9, 92

Conread position: 70-273
Cow position: chr27:29614798-29615002 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 92

Conread position: 70-284
Cow position: chr27:10404361-10404145 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 91

Conread position: 70-285
Cow position: chr27:23957274-23957488 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 9, 184

Conread position: 70-295
Cow position: chr27:18435374-18435150 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 69

Conread position: 70-299
Cow position: chr27:20828948-20828724 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 31

Conread position: 70-299
Cow position: chr27:29164531-29164754 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 55

Conread position: 70-299
Cow position: chr27:31386874-31386644 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 80

Conread position: 70-307
Cow position: chr27:15669018-15668777 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 70-308
Cow position: chr27:10979616-10979857 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 231

Conread position: 71-237
Cow position: chr27:178620-178787 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 91

Conread position: 71-263
Cow position: chr27:2949559-2949377 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 30

Conread position: 71-281
Cow position: chr27:24223712-24223922 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 8, 36

Conread position: 71-283
Cow position: chr27:27389270-27389051 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 8, 97

Conread position: 71-284
Cow position: chr27:13204222-13204430 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 65

Conread position: 71-297
Cow position: chr27:7343671-7343444 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 8, 30

Conread position: 71-297
Cow position: chr27:27055053-27055270 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 10, 68

Conread position: 71-302
Cow position: chr27:4944749-4944525 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 8, 80

Conread position: 71-302
Cow position: chr27:12459047-12459275 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 69, 90

Conread position: 71-303
Cow position: chr27:17397694-17397464 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 74

Conread position: 71-304
Cow position: chr27:15453970-15454199 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 8, 34

Conread position: 71-306
Cow position: chr27:18507402-18507641 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 119

Conread position: 71-315
Cow position: chr27:23918277-23918032 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 8, 84

Conread position: 72-273
Cow position: chr27:19576565-19576363 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 7, 90

Conread position: 80-275
Cow position: chr27:17102668-17102858 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 80-280
Cow position: chr27:26323210-26323415 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 189

Conread position: 80-282
Cow position: chr27:16705021-16705220 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 80-291
Cow position: chr27:23477716-23477921 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 194, 83

Conread position: 80-293
Cow position: chr27:20517420-20517638 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 81

Conread position: 80-297
Cow position: chr27:15003211-15002994 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 155, 146

Conread position: 80-299
Cow position: chr27:6106475-6106684 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 80-299
Cow position: chr27:23484984-23485195 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 80-306
Cow position: chr27:26617183-26617398 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 80-307
Cow position: chr27:15409257-15409042 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 80-308
Cow position: chr27:23560261-23560037 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 74, 0

Conread position: 80-309
Cow position: chr27:30407279-30407041 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 100

Conread position: 82-306
Cow position: chr27:23108132-23107911 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 55, 72

Conread position: 82-306
Cow position: chr27:27695005-27694778 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 94

Conread position: 82-307
Cow position: chr27:20897250-20897031 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 78, 0

Conread position: 83-264
Cow position: chr27:26504075-26504253 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 147, 0

Conread position: 83-302
Cow position: chr27:16103582-16103796 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 113, 0

Conread position: 83-302
Cow position: chr27:27460807-27460583 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 132

Conread position: 83-305
Cow position: chr27:299603-299389 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 83-306
Cow position: chr27:12425059-12425282 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 103

Conread position: 83-308
Cow position: chr27:31169334-31169116 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 83-310
Cow position: chr27:13318206-13317977 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 81

Conread position: 83-314
Cow position: chr27:29494127-29493895 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 177, 45

Conread position: 84-281
Cow position: chr27:22220322-22220522 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 84-309
Cow position: chr27:21990915-21991146 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 102

Conread position: 85-267
Cow position: chr27:15859524-15859343 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 147

Conread position: 85-306
Cow position: chr27:435005-435228 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 100

Conread position: 86-303
Cow position: chr27:26238798-26239015 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 73, 99

Conread position: 86-304
Cow position: chr27:27632819-27632610 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 107-299
Cow position: chr27:20481561-20481379 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 136-299
Cow position: chr27:237094-237255 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 139-295
Cow position: chr27:22179940-22179787 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 139-304
Cow position: chr27:27136692-27136529 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 120, 24

Conread position: 140-290
Cow position: chr27:788967-788820 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 140-293
Cow position: chr27:12710080-12710229 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 21

Conread position: 140-299
Cow position: chr27:16589873-16589716 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 140-299
Cow position: chr27:30489581-30489424 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 142-310
Cow position: chr27:22348319-22348487 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 103, 94

Conread position: 143-304
Cow position: chr27:4672842-4673007 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 163-332
Cow position: chr27:20092984-20092815 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 157, 134

Conread position: 184-304
Cow position: chr27:16625771-16625888 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 0

Show alignments to all cow chromosomes.