Cow genome map
| Conread name: | rsto206_k11.y1 |
| Conread position: | 33-308 |
| Cow position: | chrX:10251935-10252210 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 56-283 |
| Cow position: | chrX:41862596-41862377 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 58-282 |
| Cow position: | chrX:3806920-3806696 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 19, 99 |
| Conread position: | 60-307 |
| Cow position: | chrX:38218952-38218703 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 19, 104 |
| Conread position: | 61-270 |
| Cow position: | chrX:23358880-23359085 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 20, 102 |
| Conread position: | 61-292 |
| Cow position: | chrX:35986052-35985824 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 20, 36 |
| Conread position: | 61-300 |
| Cow position: | chrX:32208591-32208826 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 61-307 |
| Cow position: | chrX:11325872-11326109 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 224, 70 |
| Conread position: | 63-244 |
| Cow position: | chrX:42760489-42760304 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 136 |
| Conread position: | 65-310 |
| Cow position: | chrX:12437049-12437287 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 66 |
| Conread position: | 66-265 |
| Cow position: | chrX:41858654-41858850 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 95, 12 |
| Conread position: | 66-285 |
| Cow position: | chrX:29467551-29467767 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 66-301 |
| Cow position: | chrX:2936186-2935952 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 13, 98 |
| Conread position: | 68-233 |
| Cow position: | chrX:39642399-39642559 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 68-240 |
| Cow position: | chrX:6480363-6480540 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 68-264 |
| Cow position: | chrX:18439229-18439028 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 119 |
| Conread position: | 68-270 |
| Cow position: | chrX:32867102-32866901 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 5, 68 |
| Conread position: | 68-293 |
| Cow position: | chrX:40826518-40826747 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 7, 132 |
| Conread position: | 68-293 |
| Cow position: | chrX:41871288-41871070 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 58 |
| Conread position: | 68-299 |
| Cow position: | chrX:39290585-39290356 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 13, 102 |
| Conread position: | 68-300 |
| Cow position: | chrX:4996820-4996581 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 68-302 |
| Cow position: | chrX:5118266-5118508 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 68-302 |
| Cow position: | chrX:34565516-34565281 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 86 |
| Conread position: | 68-304 |
| Cow position: | chrX:17231969-17231727 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 126 |
| Conread position: | 68-304 |
| Cow position: | chrX:33654611-33654851 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 7, 99 |
| Conread position: | 68-304 |
| Cow position: | chrX:33854995-33855228 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 68-305 |
| Cow position: | chrX:20584543-20584313 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 11, 72 |
| Conread position: | 68-305 |
| Cow position: | chrX:26843035-26843276 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 11, 123 |
| Conread position: | 68-307 |
| Cow position: | chrX:34836844-34837074 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 69-247 |
| Cow position: | chrX:41454723-41454905 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 10, 119 |
| Conread position: | 69-282 |
| Cow position: | chrX:42836408-42836195 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 9 |
| Conread position: | 69-291 |
| Cow position: | chrX:45502365-45502150 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 10, 32 |
| Conread position: | 69-299 |
| Cow position: | chrX:17949262-17949491 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 117 |
| Conread position: | 69-301 |
| Cow position: | chrX:6407771-6407542 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 75, 9 |
| Conread position: | 69-301 |
| Cow position: | chrX:25207631-25207859 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 10, 76 |
| Conread position: | 69-303 |
| Cow position: | chrX:46291369-46291129 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 140, 96 |
| Conread position: | 69-305 |
| Cow position: | chrX:4632624-4632867 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 97 |
| Conread position: | 69-305 |
| Cow position: | chrX:15231429-15231669 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 69-308 |
| Cow position: | chrX:12095541-12095786 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 10, 97 |
| Conread position: | 69-318 |
| Cow position: | chrX:26493235-26492981 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 83, 117 |
| Conread position: | 70-228 |
| Cow position: | chrX:14135904-14135746 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 70-233 |
| Cow position: | chrX:41215552-41215385 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 70-246 |
| Cow position: | chrX:23471639-23471816 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 70-280 |
| Cow position: | chrX:20583889-20583682 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 70-280 |
| Cow position: | chrX:31480193-31479987 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 70-282 |
| Cow position: | chrX:38094297-38094502 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 31 |
| Conread position: | 70-292 |
| Cow position: | chrX:27668733-27668954 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 9, 48 |
| Conread position: | 70-292 |
| Cow position: | chrX:34504826-34505045 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 147, 101 |
| Conread position: | 70-293 |
| Cow position: | chrX:6599547-6599779 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 70-293 |
| Cow position: | chrX:12979606-12979831 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 70-298 |
| Cow position: | chrX:11656307-11656079 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 94 |
| Conread position: | 70-299 |
| Cow position: | chrX:24365593-24365824 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 9, 119 |
| Conread position: | 70-303 |
| Cow position: | chrX:4289663-4289436 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 60 |
| Conread position: | 70-304 |
| Cow position: | chrX:40035210-40035448 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 17, 188 |
| Conread position: | 70-305 |
| Cow position: | chrX:43115377-43115143 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 11, 172 |
| Conread position: | 70-306 |
| Cow position: | chrX:30337725-30337962 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 9, 157 |
| Conread position: | 70-306 |
| Cow position: | chrX:45977153-45976915 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 39 |
| Conread position: | 70-307 |
| Cow position: | chrX:11633911-11633671 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 94 |
| Conread position: | 70-307 |
| Cow position: | chrX:38587616-38587853 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 28 |
| Conread position: | 70-308 |
| Cow position: | chrX:37072615-37072375 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 9, 84 |
| Conread position: | 70-309 |
| Cow position: | chrX:34377168-34376931 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 70-310 |
| Cow position: | chrX:9251934-9252179 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 70-310 |
| Cow position: | chrX:27431695-27431931 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 70-310 |
| Cow position: | chrX:41941852-41941609 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 58 |
| Conread position: | 70-317 |
| Cow position: | chrX:4403547-4403287 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 9, 129 |
| Conread position: | 71-250 |
| Cow position: | chrX:35409980-35409798 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 8, 90 |
| Conread position: | 71-269 |
| Cow position: | chrX:5026479-5026283 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 8, 84 |
| Conread position: | 71-283 |
| Cow position: | chrX:30824211-30824000 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 188, 78 |
| Conread position: | 71-292 |
| Cow position: | chrX:32942852-32943072 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 71-298 |
| Cow position: | chrX:42480055-42479831 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 8, 27 |
| Conread position: | 71-301 |
| Cow position: | chrX:34412076-34411841 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 71-302 |
| Cow position: | chrX:20957465-20957234 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 87, 216 |
| Conread position: | 71-303 |
| Cow position: | chrX:34792095-34792318 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 8, 30 |
| Conread position: | 71-304 |
| Cow position: | chrX:4152816-4153040 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 8, 66 |
| Conread position: | 71-305 |
| Cow position: | chrX:12972906-12972672 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 8, 66 |
| Conread position: | 71-306 |
| Cow position: | chrX:42894150-42893914 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 8, 74 |
| Conread position: | 71-307 |
| Cow position: | chrX:16836066-16836297 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 8, 82 |
| Conread position: | 71-307 |
| Cow position: | chrX:22115086-22115327 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 8, 232 |
| Conread position: | 71-310 |
| Cow position: | chrX:28940472-28940228 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 8, 230 |
| Conread position: | 71-311 |
| Cow position: | chrX:5134702-5134457 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 8, 187 |
| Conread position: | 71-316 |
| Cow position: | chrX:16984863-16984622 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 8, 82 |
| Conread position: | 73-307 |
| Cow position: | chrX:19469291-19469515 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 73-307 |
| Cow position: | chrX:29050468-29050238 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 76-314 |
| Cow position: | chrX:29544665-29544898 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 221, 23 |
| Conread position: | 78-226 |
| Cow position: | chrX:4486805-4486954 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 80-247 |
| Cow position: | chrX:31983361-31983536 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 80-266 |
| Cow position: | chrX:35382825-35383006 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 80-279 |
| Cow position: | chrX:29601612-29601811 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 80-282 |
| Cow position: | chrX:42449796-42450000 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 117 |
| Conread position: | 80-285 |
| Cow position: | chrX:38302031-38301820 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 80-291 |
| Cow position: | chrX:8869187-8869397 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 80-291 |
| Cow position: | chrX:38560767-38560564 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 80-293 |
| Cow position: | chrX:22075012-22074798 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 145, 19 |
| Conread position: | 80-293 |
| Cow position: | chrX:24749304-24749091 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 82, 153 |
| Conread position: | 80-298 |
| Cow position: | chrX:29542011-29542219 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 80-298 |
| Cow position: | chrX:38642459-38642247 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 80-299 |
| Cow position: | chrX:6544462-6544254 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 80-299 |
| Cow position: | chrX:18111596-18111374 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 105 |
| Conread position: | 80-299 |
| Cow position: | chrX:35276203-35275983 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 89 |
| Conread position: | 80-299 |
| Cow position: | chrX:47345547-47345325 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 69, 219 |
| Conread position: | 80-302 |
| Cow position: | chrX:29230224-29229993 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 80-302 |
| Cow position: | chrX:40685112-40685334 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 80-304 |
| Cow position: | chrX:1087931-1088148 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 80-306 |
| Cow position: | chrX:1466380-1466151 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 37, 83 |
| Conread position: | 80-307 |
| Cow position: | chrX:21986084-21986303 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 221, 55 |
| Conread position: | 80-307 |
| Cow position: | chrX:22392771-22392995 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 80-308 |
| Cow position: | chrX:26881345-26881578 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 67, 36 |
| Conread position: | 80-308 |
| Cow position: | chrX:42927613-42927835 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 82-308 |
| Cow position: | chrX:34314236-34314013 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 217, 78 |
| Conread position: | 83-250 |
| Cow position: | chrX:42875423-42875258 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 83-261 |
| Cow position: | chrX:34991575-34991399 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 83-280 |
| Cow position: | chrX:47079841-47079643 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 70, 6 |
| Conread position: | 83-291 |
| Cow position: | chrX:42380898-42381107 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 66, 16 |
| Conread position: | 83-302 |
| Cow position: | chrX:22482475-22482703 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 86, 143 |
| Conread position: | 83-304 |
| Cow position: | chrX:4467165-4466959 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 83-304 |
| Cow position: | chrX:37780898-37781117 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 83-306 |
| Cow position: | chrX:9650813-9651036 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 218, 76 |
| Conread position: | 83-306 |
| Cow position: | chrX:31436683-31436464 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 83-307 |
| Cow position: | chrX:14883743-14883967 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 59, 77 |
| Conread position: | 83-309 |
| Cow position: | chrX:42246967-42247195 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 104 |
| Conread position: | 83-329 |
| Cow position: | chrX:36866387-36866143 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 103 |
| Conread position: | 84-304 |
| Cow position: | chrX:19394768-19394545 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 84-305 |
| Cow position: | chrX:23113505-23113275 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 34, 88 |
| Conread position: | 86-304 |
| Cow position: | chrX:27145810-27145596 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 87-305 |
| Cow position: | chrX:35543094-35542886 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 88-328 |
| Cow position: | chrX:17795189-17794951 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 229, 201 |
| Conread position: | 107-298 |
| Cow position: | chrX:34532708-34532518 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 107-300 |
| Cow position: | chrX:13647594-13647787 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 176 |
| Conread position: | 107-303 |
| Cow position: | chrX:4515878-4515678 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 142, 58 |
| Conread position: | 107-304 |
| Cow position: | chrX:5919682-5919484 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 94, 37 |
| Conread position: | 107-307 |
| Cow position: | chrX:14275558-14275755 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 194, 35 |
| Conread position: | 109-304 |
| Cow position: | chrX:6414226-6414040 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 128-278 |
| Cow position: | chrX:34508712-34508562 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 128-304 |
| Cow position: | chrX:44926623-44926455 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 130-284 |
| Cow position: | chrX:24424237-24424389 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 137-302 |
| Cow position: | chrX:40531884-40532048 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 139-309 |
| Cow position: | chrX:878221-878392 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 16, 169 |
| Conread position: | 140-306 |
| Cow position: | chrX:40269648-40269481 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 140-307 |
| Cow position: | chrX:17726130-17725965 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 140-308 |
| Cow position: | chrX:38853354-38853186 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 23, 91 |
| Conread position: | 141-305 |
| Cow position: | chrX:31312182-31312021 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 141-307 |
| Cow position: | chrX:5135367-5135534 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 65, 21 |
| Conread position: | 144-304 |
| Cow position: | chrX:27306606-27306446 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 154-293 |
| Cow position: | chrX:29501742-29501878 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 154-310 |
| Cow position: | chrX:4615869-4616026 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 117, 30 |
| Conread position: | 156-306 |
| Cow position: | chrX:46429679-46429829 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 163-308 |
| Cow position: | chrX:37232540-37232397 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 139, 119 |
| Conread position: | 164-305 |
| Cow position: | chrX:12082192-12082333 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 127, 72 |
| Conread position: | 170-304 |
| Cow position: | chrX:19273581-19273715 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.