• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rsto211_b9.y1
        

               
Conread position:
               
103-415
               

               
Cow position:
               
chr29:26275428-26275740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
104-411
               

               
Cow position:
               
chr29:24952500-24952810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
20, 157
               

               
Conread position:
               
110-431
               

               
Cow position:
               
chr29:23244054-23243731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 21
               

               
Conread position:
               
116-423
               

               
Cow position:
               
chr29:36530699-36531005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 33
               

               
Conread position:
               
116-442
               

               
Cow position:
               
chr29:11562446-11562763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
219, 18
               

               
Conread position:
               
119-333
               

               
Cow position:
               
chr29:11136060-11135851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
6, 34
               

               
Conread position:
               
120-381
               

               
Cow position:
               
chr29:23984123-23983858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
59, 28
               

               
Conread position:
               
120-407
               

               
Cow position:
               
chr29:32963394-32963660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
121-332
               

               
Cow position:
               
chr29:42849060-42849269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
121-333
               

               
Cow position:
               
chr29:10018407-10018624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
121-404
               

               
Cow position:
               
chr29:28195676-28195401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
121-410
               

               
Cow position:
               
chr29:34773901-34773609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
123-349
               

               
Cow position:
               
chr29:9718936-9718707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 77
               

               
Conread position:
               
123-357
               

               
Cow position:
               
chr29:29974877-29975111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
123-392
               

               
Cow position:
               
chr29:43328475-43328752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
123-400
               

               
Cow position:
               
chr29:10235293-10235023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
123-413
               

               
Cow position:
               
chr29:9709531-9709823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
123-416
               

               
Cow position:
               
chr29:5892683-5892977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 72
               

               
Conread position:
               
132-395
               

               
Cow position:
               
chr29:17607263-17607527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
133-399
               

               
Cow position:
               
chr29:10456713-10456461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
13, 121
               

               
Conread position:
               
133-399
               

               
Cow position:
               
chr29:37599361-37599105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 91
               

               
Conread position:
               
133-408
               

               
Cow position:
               
chr29:23697822-23698104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
133-415
               

               
Cow position:
               
chr29:1395443-1395715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 90
               

               
Conread position:
               
138-400
               

               
Cow position:
               
chr29:43009233-43008968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
11, 120
               

               
Conread position:
               
139-319
               

               
Cow position:
               
chr29:17301384-17301565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
106, 10
               

               
Conread position:
               
139-374
               

               
Cow position:
               
chr29:41364960-41365199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
10, 111
               

               
Conread position:
               
139-383
               

               
Cow position:
               
chr29:16309595-16309840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
196, 109
               

               
Conread position:
               
139-389
               

               
Cow position:
               
chr29:10818585-10818345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
10, 112
               

               
Conread position:
               
139-389
               

               
Cow position:
               
chr29:31943733-31943973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
126, 58
               

               
Conread position:
               
139-394
               

               
Cow position:
               
chr29:42364164-42363906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
10, 96
               

               
Conread position:
               
139-395
               

               
Cow position:
               
chr29:13127270-13127009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
139-397
               

               
Cow position:
               
chr29:2055910-2056174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
139-411
               

               
Cow position:
               
chr29:26654182-26653916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
139-411
               

               
Cow position:
               
chr29:32211206-32210944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 89
               

               
Conread position:
               
139-411
               

               
Cow position:
               
chr29:45005773-45005502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 80
               

               
Conread position:
               
139-415
               

               
Cow position:
               
chr29:4625146-4624868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 36
               

               
Conread position:
               
139-415
               

               
Cow position:
               
chr29:36210012-36210268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
139-434
               

               
Cow position:
               
chr29:22714874-22714574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 105
               

               
Conread position:
               
140-389
               

               
Cow position:
               
chr29:28446405-28446151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
9, 158
               

               
Conread position:
               
140-411
               

               
Cow position:
               
chr29:40096814-40097089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
30, 61
               

               
Conread position:
               
143-305
               

               
Cow position:
               
chr29:4328281-4328435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
143-414
               

               
Cow position:
               
chr29:34745803-34745529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
103, 7
               

               
Conread position:
               
143-418
               

               
Cow position:
               
chr29:36220384-36220668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
143-429
               

               
Cow position:
               
chr29:11646952-11647239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
108, 48
               

               
Conread position:
               
144-390
               

               
Cow position:
               
chr29:18462697-18462444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
103, 68
               

               
Conread position:
               
144-408
               

               
Cow position:
               
chr29:11433980-11434243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 69
               

               
Conread position:
               
145-320
               

               
Cow position:
               
chr29:2623617-2623447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
145-351
               

               
Cow position:
               
chr29:26986791-26986996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 86
               

               
Conread position:
               
145-357
               

               
Cow position:
               
chr29:31674489-31674706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
105, 72
               

               
Conread position:
               
145-368
               

               
Cow position:
               
chr29:868632-868859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
29, 119
               

               
Conread position:
               
145-381
               

               
Cow position:
               
chr29:4520194-4520433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
95, 173
               

               
Conread position:
               
145-386
               

               
Cow position:
               
chr29:19821146-19821385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
176, 100
               

               
Conread position:
               
145-387
               

               
Cow position:
               
chr29:44008923-44008682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
29, 132
               

               
Conread position:
               
145-389
               

               
Cow position:
               
chr29:22162394-22162144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
145-393
               

               
Cow position:
               
chr29:35501792-35501544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
187, 75
               

               
Conread position:
               
145-394
               

               
Cow position:
               
chr29:5186636-5186383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 38
               

               
Conread position:
               
145-395
               

               
Cow position:
               
chr29:732480-732726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 15
               

               
Conread position:
               
145-395
               

               
Cow position:
               
chr29:11398064-11397816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
185, 27
               

               
Conread position:
               
145-397
               

               
Cow position:
               
chr29:29769492-29769238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 100
               

               
Conread position:
               
145-398
               

               
Cow position:
               
chr29:11054001-11053745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
23, 85
               

               
Conread position:
               
145-398
               

               
Cow position:
               
chr29:19428517-19428774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 110
               

               
Conread position:
               
145-399
               

               
Cow position:
               
chr29:24624110-24624364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
100, 17
               

               
Conread position:
               
145-399
               

               
Cow position:
               
chr29:35677691-35677428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 239
               

               
Conread position:
               
145-403
               

               
Cow position:
               
chr29:20903425-20903171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 29
               

               
Conread position:
               
145-403
               

               
Cow position:
               
chr29:36216976-36217231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 87
               

               
Conread position:
               
145-405
               

               
Cow position:
               
chr29:28166354-28166101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
186, 69
               

               
Conread position:
               
145-405
               

               
Cow position:
               
chr29:41811723-41811469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
192, 42
               

               
Conread position:
               
145-406
               

               
Cow position:
               
chr29:39111456-39111192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 209
               

               
Conread position:
               
145-408
               

               
Cow position:
               
chr29:35291949-35292218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 47
               

               
Conread position:
               
145-409
               

               
Cow position:
               
chr29:4085178-4085434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
145-409
               

               
Cow position:
               
chr29:4875034-4874755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 226
               

               
Conread position:
               
145-409
               

               
Cow position:
               
chr29:6286300-6286036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
29, 104
               

               
Conread position:
               
145-409
               

               
Cow position:
               
chr29:43099885-43099620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
190, 11
               

               
Conread position:
               
145-410
               

               
Cow position:
               
chr29:1325300-1325566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
145-411
               

               
Cow position:
               
chr29:10838809-10839070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
163, 109
               

               
Conread position:
               
145-411
               

               
Cow position:
               
chr29:12025612-12025349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
31, 171
               

               
Conread position:
               
145-411
               

               
Cow position:
               
chr29:12784098-12783836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
29, 101
               

               
Conread position:
               
145-411
               

               
Cow position:
               
chr29:22613285-22613554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
103, 226
               

               
Conread position:
               
145-411
               

               
Cow position:
               
chr29:25091971-25092233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
105, 86
               

               
Conread position:
               
145-411
               

               
Cow position:
               
chr29:40583652-40583912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
95, 104
               

               
Conread position:
               
145-412
               

               
Cow position:
               
chr29:29057040-29057304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
145-413
               

               
Cow position:
               
chr29:19762135-19762397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 73
               

               
Conread position:
               
145-413
               

               
Cow position:
               
chr29:25737559-25737286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 258
               

               
Conread position:
               
145-413
               

               
Cow position:
               
chr29:25814976-25814706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
190, 27
               

               
Conread position:
               
145-413
               

               
Cow position:
               
chr29:31928840-31929116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
145-414
               

               
Cow position:
               
chr29:6844772-6844502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
145-415
               

               
Cow position:
               
chr29:13639511-13639235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
113, 89
               

               
Conread position:
               
145-417
               

               
Cow position:
               
chr29:10156446-10156173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 159
               

               
Conread position:
               
145-419
               

               
Cow position:
               
chr29:12680017-12680289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 104
               

               
Conread position:
               
145-423
               

               
Cow position:
               
chr29:32799853-32799572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
23, 153
               

               
Conread position:
               
145-424
               

               
Cow position:
               
chr29:4480313-4480033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 157
               

               
Conread position:
               
145-425
               

               
Cow position:
               
chr29:29314796-29314519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 217
               

               
Conread position:
               
145-427
               

               
Cow position:
               
chr29:24252097-24252376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
92, 69
               

               
Conread position:
               
145-435
               

               
Cow position:
               
chr29:11704984-11705264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
246, 33
               

               
Conread position:
               
145-439
               

               
Cow position:
               
chr29:26416219-26416504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
107, 21
               

               
Conread position:
               
145-449
               

               
Cow position:
               
chr29:13372524-13372828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
190, 97
               

               
Conread position:
               
145-450
               

               
Cow position:
               
chr29:27588782-27589090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 69
               

               
Conread position:
               
145-466
               

               
Cow position:
               
chr29:4334586-4334896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
148-359
               

               
Cow position:
               
chr29:24103683-24103466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
102, 84
               

               
Conread position:
               
148-359
               

               
Cow position:
               
chr29:40166108-40166319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
97, 69
               

               
Conread position:
               
148-363
               

               
Cow position:
               
chr29:29942871-29942648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
148-366
               

               
Cow position:
               
chr29:44682235-44682022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
187, 46
               

               
Conread position:
               
148-385
               

               
Cow position:
               
chr29:5098898-5098665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
187, 69
               

               
Conread position:
               
148-386
               

               
Cow position:
               
chr29:27329754-27329994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
163, 100
               

               
Conread position:
               
148-386
               

               
Cow position:
               
chr29:27826388-27826622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
177, 61
               

               
Conread position:
               
148-389
               

               
Cow position:
               
chr29:17154629-17154883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
102, 184
               

               
Conread position:
               
148-392
               

               
Cow position:
               
chr29:1229473-1229715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
148-395
               

               
Cow position:
               
chr29:9912034-9912286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
104, 227
               

               
Conread position:
               
148-395
               

               
Cow position:
               
chr29:31594268-31594035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
115, 97
               

               
Conread position:
               
148-395
               

               
Cow position:
               
chr29:39567549-39567792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
187, 100
               

               
Conread position:
               
148-402
               

               
Cow position:
               
chr29:31926428-31926181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 100
               

               
Conread position:
               
148-408
               

               
Cow position:
               
chr29:28197144-28196889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
148-411
               

               
Cow position:
               
chr29:26673044-26672790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 92
               

               
Conread position:
               
148-415
               

               
Cow position:
               
chr29:37618168-37618437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
116, 70
               

               
Conread position:
               
148-418
               

               
Cow position:
               
chr29:18878635-18878347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 72
               

               
Conread position:
               
149-384
               

               
Cow position:
               
chr29:2984747-2984990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
149-389
               

               
Cow position:
               
chr29:26615859-26615612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
149-399
               

               
Cow position:
               
chr29:1556795-1557046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
98, 43
               

               
Conread position:
               
149-399
               

               
Cow position:
               
chr29:4002759-4003007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
108, 47
               

               
Conread position:
               
149-407
               

               
Cow position:
               
chr29:11915683-11915943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
149-413
               

               
Cow position:
               
chr29:17109831-17110084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 83
               

               
Conread position:
               
149-415
               

               
Cow position:
               
chr29:10058673-10058409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
109, 67
               

               
Conread position:
               
149-417
               

               
Cow position:
               
chr29:8669229-8669486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
21, 49
               

               
Conread position:
               
149-427
               

               
Cow position:
               
chr29:40959985-40959704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
150-334
               

               
Cow position:
               
chr29:1124519-1124701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
150-415
               

               
Cow position:
               
chr29:22175552-22175813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
185, 15
               

               
Conread position:
               
151-333
               

               
Cow position:
               
chr29:3502433-3502616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
151-346
               

               
Cow position:
               
chr29:29795523-29795320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
151-399
               

               
Cow position:
               
chr29:16609606-16609863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
23, 147
               

               
Conread position:
               
151-407
               

               
Cow position:
               
chr29:39329729-39329480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
184, 73
               

               
Conread position:
               
151-411
               

               
Cow position:
               
chr29:35084358-35084097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 90
               

               
Conread position:
               
151-415
               

               
Cow position:
               
chr29:2744407-2744140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
99, 225
               

               
Conread position:
               
151-415
               

               
Cow position:
               
chr29:17296996-17297267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
23, 108
               

               
Conread position:
               
151-415
               

               
Cow position:
               
chr29:21443479-21443207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 228
               

               
Conread position:
               
151-421
               

               
Cow position:
               
chr29:87153-86875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
23, 233
               

               
Conread position:
               
151-481
               

               
Cow position:
               
chr29:40299147-40298829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
152-417
               

               
Cow position:
               
chr29:41530716-41530980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
155-432
               

               
Cow position:
               
chr29:25333592-25333313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
91, 17
               

               
Conread position:
               
158-303
               

               
Cow position:
               
chr29:43311922-43311777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
102, 75
               

               
Conread position:
               
158-399
               

               
Cow position:
               
chr29:29176743-29176502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 90
               

               
Conread position:
               
158-413
               

               
Cow position:
               
chr29:34359108-34358849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 57
               

               
Conread position:
               
159-411
               

               
Cow position:
               
chr29:38580850-38581109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
160-409
               

               
Cow position:
               
chr29:43251294-43251040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
40, 31
               

               
Conread position:
               
163-399
               

               
Cow position:
               
chr29:22936145-22936386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 148
               

               
Conread position:
               
163-411
               

               
Cow position:
               
chr29:19338865-19339128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
122, 8
               

               
Conread position:
               
164-417
               

               
Cow position:
               
chr29:40117446-40117704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
166-413
               

               
Cow position:
               
chr29:30440811-30441068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
84, 208
               

               
Conread position:
               
167-387
               

               
Cow position:
               
chr29:12626098-12625873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
78, 90
               

               
Conread position:
               
167-399
               

               
Cow position:
               
chr29:13028319-13028555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
167-414
               

               
Cow position:
               
chr29:21941480-21941731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
167-415
               

               
Cow position:
               
chr29:26017620-26017371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 7
               

               
Conread position:
               
167-415
               

               
Cow position:
               
chr29:27858675-27858918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 57
               

               
Conread position:
               
167-415
               

               
Cow position:
               
chr29:28775575-28775332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
85, 6
               

               
Conread position:
               
167-423
               

               
Cow position:
               
chr29:4194235-4193989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
170, 7
               

               
Conread position:
               
168-395
               

               
Cow position:
               
chr29:6015004-6015237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
124, 134
               

               
Conread position:
               
168-437
               

               
Cow position:
               
chr29:26559358-26559093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
169, 29
               

               
Conread position:
               
169-410
               

               
Cow position:
               
chr29:5063031-5063275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
172-397
               

               
Cow position:
               
chr29:4120734-4120967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
178-413
               

               
Cow position:
               
chr29:1007708-1007947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
95, 117
               

               
Conread position:
               
178-417
               

               
Cow position:
               
chr29:40994998-40994758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
88, 70
               

               
Conread position:
               
178-437
               

               
Cow position:
               
chr29:847749-847489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
130, 57
               

               
Conread position:
               
179-357
               

               
Cow position:
               
chr29:17168298-17168481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 140
               

               
Conread position:
               
179-402
               

               
Cow position:
               
chr29:8862585-8862363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
129, 76
               

               
Conread position:
               
179-418
               

               
Cow position:
               
chr29:1614818-1615063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
81, 68
               

               
Conread position:
               
179-475
               

               
Cow position:
               
chr29:32290501-32290798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
153, 82
               

               
Conread position:
               
180-410
               

               
Cow position:
               
chr29:26778774-26779008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
68, 34
               

               
Conread position:
               
183-386
               

               
Cow position:
               
chr29:24578755-24578965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
183-426
               

               
Cow position:
               
chr29:8926566-8926319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 33
               

               
Conread position:
               
194-401
               

               
Cow position:
               
chr29:13373207-13373418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
129, 54
               

               
Conread position:
               
194-411
               

               
Cow position:
               
chr29:21665995-21666215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
142, 59
               

               
Conread position:
               
197-392
               

               
Cow position:
               
chr29:27873515-27873709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
135, 33
               

               
Conread position:
               
197-415
               

               
Cow position:
               
chr29:2263086-2262864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
197-415
               

               
Cow position:
               
chr29:7624087-7624307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
62, 9
               

               
Conread position:
               
198-399
               

               
Cow position:
               
chr29:15947083-15947282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
132, 31
               

               
Conread position:
               
198-432
               

               
Cow position:
               
chr29:18085482-18085723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
52, 8
               

               
Conread position:
               
200-398
               

               
Cow position:
               
chr29:32894182-32894377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
137, 44
               

               
Conread position:
               
200-413
               

               
Cow position:
               
chr29:19949215-19949434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
43, 208
               

               
Conread position:
               
200-417
               

               
Cow position:
               
chr29:16011752-16011536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 138
               

               
Conread position:
               
201-411
               

               
Cow position:
               
chr29:20770258-20770471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
206-386
               

               
Cow position:
               
chr29:18012474-18012660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
206-396
               

               
Cow position:
               
chr29:8005003-8004815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
129, 42
               

               
Conread position:
               
206-407
               

               
Cow position:
               
chr29:22519210-22519004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 161
               

               
Conread position:
               
207-413
               

               
Cow position:
               
chr29:30548694-30548905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
207-480
               

               
Cow position:
               
chr29:13867291-13867013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
208-415
               

               
Cow position:
               
chr29:36952378-36952173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
50, 159
               

               
Conread position:
               
210-429
               

               
Cow position:
               
chr29:28840077-28840301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
60, 99
               

               
Conread position:
               
211-425
               

               
Cow position:
               
chr29:23220577-23220359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
46, 142
               

               
Conread position:
               
212-395
               

               
Cow position:
               
chr29:742716-742538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
212-395
               

               
Cow position:
               
chr29:22029032-22028844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
212-408
               

               
Cow position:
               
chr29:41112949-41112757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
125, 41
               

               
Conread position:
               
213-354
               

               
Cow position:
               
chr29:31477189-31477043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
213-411
               

               
Cow position:
               
chr29:29324487-29324299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
124, 41
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr29:5210413-5210674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
35, 232
               

               
Conread position:
               
218-409
               

               
Cow position:
               
chr29:23825289-23825085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
219-407
               

               
Cow position:
               
chr29:32176612-32176795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
222-405
               

               
Cow position:
               
chr29:44139310-44139122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
44, 129
               

               
Conread position:
               
222-415
               

               
Cow position:
               
chr29:38978465-38978660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 131
               

               
Conread position:
               
224-430
               

               
Cow position:
               
chr29:40873946-40874158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
226-399
               

               
Cow position:
               
chr29:43441555-43441377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
47, 41
               

               
Conread position:
               
227-410
               

               
Cow position:
               
chr29:21285300-21285485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
108, 34
               

               
Conread position:
               
227-483
               

               
Cow position:
               
chr29:28049081-28049345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
229-397
               

               
Cow position:
               
chr29:30681769-30681598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
229-397
               

               
Cow position:
               
chr29:43544659-43544490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
106, 33
               

               
Conread position:
               
229-414
               

               
Cow position:
               
chr29:30708678-30708493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
91, 73
               

               
Conread position:
               
230-408
               

               
Cow position:
               
chr29:22167138-22166957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 157
               

               
Conread position:
               
233-389
               

               
Cow position:
               
chr29:23155174-23155331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
104, 28
               

               
Conread position:
               
237-402
               

               
Cow position:
               
chr29:26887881-26887718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
237-430
               

               
Cow position:
               
chr29:31200208-31200405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
98, 31
               

               
Conread position:
               
238-411
               

               
Cow position:
               
chr29:30918499-30918672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
101, 157
               

               
Conread position:
               
242-409
               

               
Cow position:
               
chr29:44991470-44991299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
8, 66
               

               
Conread position:
               
244-399
               

               
Cow position:
               
chr29:5788983-5789144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
248-480
               

               
Cow position:
               
chr29:683531-683292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 124
               

               
Conread position:
               
250-415
               

               
Cow position:
               
chr29:36357091-36357257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
79, 62
               

               
Conread position:
               
251-413
               

               
Cow position:
               
chr29:28066454-28066616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 134
               

               
Conread position:
               
252-407
               

               
Cow position:
               
chr29:22723565-22723724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
254-415
               

               
Cow position:
               
chr29:9310566-9310731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
82, 73
               

               
Conread position:
               
255-399
               

               
Cow position:
               
chr29:40791277-40791418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
255-411
               

               
Cow position:
               
chr29:17804502-17804661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
80, 90
               

               
Conread position:
               
256-411
               

               
Cow position:
               
chr29:4070596-4070751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
79, 59
               

               
Conread position:
               
256-413
               

               
Cow position:
               
chr29:26540572-26540411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
79, 150
               

               
Conread position:
               
256-413
               

               
Cow position:
               
chr29:39038301-39038138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
256-419
               

               
Cow position:
               
chr29:32197665-32197833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
82, 139
               

               
Conread position:
               
256-421
               

               
Cow position:
               
chr29:21645286-21645446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 56
               

               
Conread position:
               
256-483
               

               
Cow position:
               
chr29:34687803-34688024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
79, 148
               

               
Conread position:
               
260-410
               

               
Cow position:
               
chr29:22735133-22734981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
267-418
               

               
Cow position:
               
chr29:7290755-7290910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
272-406
               

               
Cow position:
               
chr29:21592692-21592828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
273-395
               

               
Cow position:
               
chr29:4423454-4423328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
273-411
               

               
Cow position:
               
chr29:1011595-1011462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
132, 42
               

               
Conread position:
               
273-413
               

               
Cow position:
               
chr29:9378622-9378764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 131
               

               
Conread position:
               
273-414
               

               
Cow position:
               
chr29:11527804-11527664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
64, 120
               

               
Conread position:
               
274-399
               

               
Cow position:
               
chr29:29308586-29308455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
275-410
               

               
Cow position:
               
chr29:36781317-36781178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
277-413
               

               
Cow position:
               
chr29:19363700-19363837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
58, 52
               

               
Conread position:
               
278-415
               

               
Cow position:
               
chr29:22729558-22729696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
281-417
               

               
Cow position:
               
chr29:19125315-19125455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
284-399
               

               
Cow position:
               
chr29:15796482-15796600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
51, 45
               

               
Conread position:
               
284-399
               

               
Cow position:
               
chr29:15797948-15798067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
284-411
               

               
Cow position:
               
chr29:12890681-12890809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
285-413
               

               
Cow position:
               
chr29:703216-703085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 94
               

               
Conread position:
               
288-417
               

               
Cow position:
               
chr29:629538-629671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
290-415
               

               
Cow position:
               
chr29:8190198-8190073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
45, 114
               

               
Conread position:
               
292-423
               

               
Cow position:
               
chr29:25288919-25288788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
295-453
               

               
Cow position:
               
chr29:43096781-43096938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
295-483
               

               
Cow position:
               
chr29:17022157-17022351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
296-412
               

               
Cow position:
               
chr29:18579827-18579713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
302-483
               

               
Cow position:
               
chr29:29940654-29940837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 98
               

               
Conread position:
               
303-425
               

               
Cow position:
               
chr29:28948989-28949114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
303-450
               

               
Cow position:
               
chr29:1402781-1402935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
332-453
               

               
Cow position:
               
chr29:26735378-26735497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
336-480
               

               
Cow position:
               
chr29:5296631-5296773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
336-483
               

               
Cow position:
               
chr29:6034089-6033944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
353-481
               

               
Cow position:
               
chr29:16989773-16989909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
369-478
               

               
Cow position:
               
chr29:25824006-25824118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               
Show alignments to all cow chromosomes.