Cow genome map

Conread name: rsto211_b9.y1

Conread position: 68-359
Cow position: chrX:29032222-29032514 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 193
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 66, 20

Conread position: 105-483
Cow position: chrX:17725823-17726214 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 43

Conread position: 108-417
Cow position: chrX:5118654-5118339 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 26

Conread position: 110-357
Cow position: chrX:45993069-45993332 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 55

Conread position: 113-395
Cow position: chrX:7646104-7646396 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 100

Conread position: 113-414
Cow position: chrX:40035591-40035281 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 74

Conread position: 117-369
Cow position: chrX:46722880-46722620 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 14, 130

Conread position: 117-399
Cow position: chrX:6278649-6278354 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 7, 0

Conread position: 117-411
Cow position: chrX:11085200-11084907 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 32, 15

Conread position: 120-413
Cow position: chrX:11655956-11656239 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 28

Conread position: 121-378
Cow position: chrX:11313913-11313663 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 171
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 123, 25

Conread position: 121-417
Cow position: chrX:14275872-14275579 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 23, 9

Conread position: 121-483
Cow position: chrX:616403-616040 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 281

Conread position: 122-329
Cow position: chrX:26876023-26875811 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 130

Conread position: 122-402
Cow position: chrX:44961613-44961898 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 187
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 12

Conread position: 122-480
Cow position: chrX:9416833-9416461 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 172

Conread position: 123-251
Cow position: chrX:35388041-35387909 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 123-389
Cow position: chrX:27206660-27206934 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 154

Conread position: 123-399
Cow position: chrX:14884097-14883811 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 11, 0

Conread position: 123-410
Cow position: chrX:34792446-34792158 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 145

Conread position: 123-411
Cow position: chrX:24424523-24424245 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 212, 125

Conread position: 123-411
Cow position: chrX:34411705-34412002 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 123-412
Cow position: chrX:12979966-12979677 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 95

Conread position: 123-429
Cow position: chrX:40269349-40269668 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 123-435
Cow position: chrX:29542358-29542046 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 216
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 10, 216

Conread position: 123-480
Cow position: chrX:31311890-31312252 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 95

Conread position: 124-415
Cow position: chrX:47345200-47345489 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 38, 16

Conread position: 126-394
Cow position: chrX:41122934-41123198 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 7, 94

Conread position: 126-410
Cow position: chrX:15147324-15147041 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 192
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 127

Conread position: 127-398
Cow position: chrX:6407417-6407686 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 68

Conread position: 133-309
Cow position: chrX:42994490-42994663 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 61

Conread position: 133-399
Cow position: chrX:678692-678431 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 19, 86

Conread position: 133-422
Cow position: chrX:46433358-46433653 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 124

Conread position: 136-425
Cow position: chrX:40320280-40320576 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 194
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 99

Conread position: 136-425
Cow position: chrX:45845979-45846271 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 12

Conread position: 137-411
Cow position: chrX:42927941-42927668 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 110

Conread position: 139-363
Cow position: chrX:13912957-13913183 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 42

Conread position: 139-383
Cow position: chrX:19273840-19273579 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 7

Conread position: 139-394
Cow position: chrX:11073310-11073052 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 13, 53

Conread position: 139-394
Cow position: chrX:46072939-46072678 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 118, 109

Conread position: 139-396
Cow position: chrX:41068604-41068866 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 116, 13

Conread position: 139-399
Cow position: chrX:17794863-17795127 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 17, 80

Conread position: 139-399
Cow position: chrX:45110537-45110800 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 10, 20

Conread position: 139-402
Cow position: chrX:32431505-32431770 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 112, 54

Conread position: 139-408
Cow position: chrX:39558469-39558196 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 122, 209

Conread position: 139-409
Cow position: chrX:35542773-35543041 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 10, 94

Conread position: 139-411
Cow position: chrX:5017536-5017265 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 10, 176

Conread position: 139-411
Cow position: chrX:29680382-29680106 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 112

Conread position: 139-412
Cow position: chrX:21986414-21986135 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 159

Conread position: 139-412
Cow position: chrX:45113498-45113777 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 108

Conread position: 139-413
Cow position: chrX:4399007-4399277 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 50

Conread position: 139-413
Cow position: chrX:9425860-9425598 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 183
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 7, 34

Conread position: 139-415
Cow position: chrX:22482808-22482530 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 80

Conread position: 139-415
Cow position: chrX:31252296-31252567 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 212
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 10, 120

Conread position: 139-415
Cow position: chrX:41870951-41871228 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 60

Conread position: 139-417
Cow position: chrX:28866118-28865843 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 189
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 96, 55

Conread position: 139-418
Cow position: chrX:35273234-35273534 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 220
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 10, 61

Conread position: 139-419
Cow position: chrX:17541845-17542121 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 102, 56

Conread position: 139-422
Cow position: chrX:34441574-34441287 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 148

Conread position: 139-425
Cow position: chrX:38853076-38853370 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 81

Conread position: 139-430
Cow position: chrX:42235647-42235350 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 101, 260

Conread position: 139-481
Cow position: chrX:40557803-40557461 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 266

Conread position: 139-483
Cow position: chrX:878497-878151 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 53

Conread position: 140-411
Cow position: chrX:27145502-27145760 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 213
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 9, 59

Conread position: 140-482
Cow position: chrX:6690374-6690042 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 247
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 35, 12

Conread position: 141-417
Cow position: chrX:30338059-30337793 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 249, 37

Conread position: 142-409
Cow position: chrX:9651141-9650870 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 73

Conread position: 142-450
Cow position: chrX:38654546-38654245 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 119, 53

Conread position: 143-371
Cow position: chrX:26625785-26625555 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 108, 51

Conread position: 143-386
Cow position: chrX:35413505-35413741 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 106

Conread position: 143-398
Cow position: chrX:38066563-38066311 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 107, 8

Conread position: 143-411
Cow position: chrX:18695038-18694776 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 191, 29

Conread position: 144-328
Cow position: chrX:20790807-20790982 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 144-346
Cow position: chrX:842042-842248 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 29, 115

Conread position: 144-386
Cow position: chrX:42470055-42469810 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 107, 42

Conread position: 144-392
Cow position: chrX:10412099-10411847 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 186, 53

Conread position: 144-395
Cow position: chrX:14973855-14973606 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 27, 111

Conread position: 144-402
Cow position: chrX:8925587-8925846 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 191, 101

Conread position: 144-411
Cow position: chrX:17888528-17888267 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 193, 41

Conread position: 145-311
Cow position: chrX:35681225-35681394 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 145-313
Cow position: chrX:36961526-36961695 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 120

Conread position: 145-333
Cow position: chrX:11589701-11589514 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 103

Conread position: 145-333
Cow position: chrX:13785476-13785286 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 151
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 96, 0

Conread position: 145-353
Cow position: chrX:38439365-38439575 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 145-355
Cow position: chrX:27685134-27685349 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 101

Conread position: 145-368
Cow position: chrX:21566289-21566520 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 145-369
Cow position: chrX:38936587-38936814 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 100, 30

Conread position: 145-369
Cow position: chrX:44836874-44837090 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 189, 6

Conread position: 145-376
Cow position: chrX:25338070-25338307 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 211

Conread position: 145-380
Cow position: chrX:6234566-6234330 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 196

Conread position: 145-386
Cow position: chrX:1514520-1514288 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 26, 66

Conread position: 145-387
Cow position: chrX:27432027-27431786 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 190, 106

Conread position: 145-387
Cow position: chrX:33539052-33539302 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 69, 116

Conread position: 145-388
Cow position: chrX:11939040-11938801 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 190
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 102, 72

Conread position: 145-389
Cow position: chrX:7161947-7162190 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 116, 86

Conread position: 145-389
Cow position: chrX:19003187-19003412 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 145-391
Cow position: chrX:917477-917232 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 185, 38

Conread position: 145-395
Cow position: chrX:1503225-1503467 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 107, 69

Conread position: 145-395
Cow position: chrX:10959510-10959255 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 95, 119

Conread position: 145-395
Cow position: chrX:17630916-17630661 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 100, 39

Conread position: 145-395
Cow position: chrX:17662706-17662458 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 189, 99

Conread position: 145-395
Cow position: chrX:34315412-34315661 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 115, 30

Conread position: 145-395
Cow position: chrX:39126220-39126466 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 184, 27

Conread position: 145-397
Cow position: chrX:29289467-29289720 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 172
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 44

Conread position: 145-398
Cow position: chrX:31442935-31442686 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 23, 51

Conread position: 145-398
Cow position: chrX:32820915-32821171 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 23, 119

Conread position: 145-399
Cow position: chrX:6265710-6265455 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 100, 15

Conread position: 145-399
Cow position: chrX:7695635-7695892 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 193
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 29, 180

Conread position: 145-399
Cow position: chrX:20584211-20584472 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 145-399
Cow position: chrX:36356002-36356249 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 145-399
Cow position: chrX:38728624-38728878 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 120

Conread position: 145-399
Cow position: chrX:42247298-42247038 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 100, 27

Conread position: 145-399
Cow position: chrX:42492628-42492380 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 64

Conread position: 145-399
Cow position: chrX:44396906-44397154 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 189, 29

Conread position: 145-399
Cow position: chrX:45976807-45977070 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 145-401
Cow position: chrX:48014328-48014581 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 114, 24

Conread position: 145-406
Cow position: chrX:5679679-5679421 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 76

Conread position: 145-407
Cow position: chrX:22387356-22387098 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 110

Conread position: 145-407
Cow position: chrX:37781224-37780956 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 145-408
Cow position: chrX:1616157-1615895 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 95, 174

Conread position: 145-408
Cow position: chrX:15007263-15006997 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 29, 121

Conread position: 145-409
Cow position: chrX:20151733-20152010 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 189
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 30, 180

Conread position: 145-409
Cow position: chrX:40685444-40685174 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 145-410
Cow position: chrX:9201437-9201702 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 103

Conread position: 145-410
Cow position: chrX:9635294-9635037 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 190, 40

Conread position: 145-410
Cow position: chrX:38963992-38964263 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 55, 16

Conread position: 145-411
Cow position: chrX:619117-618852 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 103

Conread position: 145-411
Cow position: chrX:4768631-4768889 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 27

Conread position: 145-411
Cow position: chrX:11717897-11717627 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 96, 33

Conread position: 145-411
Cow position: chrX:23514128-23513866 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 175, 103

Conread position: 145-411
Cow position: chrX:24331665-24331932 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 104

Conread position: 145-411
Cow position: chrX:26881681-26881408 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 145-411
Cow position: chrX:27174882-27175154 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 97

Conread position: 145-411
Cow position: chrX:29601943-29601672 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 145-411
Cow position: chrX:34401885-34402162 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 100, 126

Conread position: 145-411
Cow position: chrX:34502809-34503078 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 185, 100

Conread position: 145-411
Cow position: chrX:34532408-34532673 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 77

Conread position: 145-411
Cow position: chrX:38094636-38094365 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 27, 137

Conread position: 145-411
Cow position: chrX:42171409-42171142 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 105, 208

Conread position: 145-412
Cow position: chrX:16762653-16762934 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 186
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 145-413
Cow position: chrX:17964632-17964364 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 178
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 49, 97

Conread position: 145-413
Cow position: chrX:38006877-38006612 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 100

Conread position: 145-413
Cow position: chrX:43115038-43115308 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 89

Conread position: 145-413
Cow position: chrX:48236704-48236975 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 27, 102

Conread position: 145-414
Cow position: chrX:3579831-3580103 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 86

Conread position: 145-414
Cow position: chrX:13177578-13177315 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 60

Conread position: 145-414
Cow position: chrX:27509133-27508866 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 176
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 190, 29

Conread position: 145-414
Cow position: chrX:34543673-34543943 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 75

Conread position: 145-415
Cow position: chrX:8730973-8731253 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 230

Conread position: 145-415
Cow position: chrX:12309498-12309226 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 10

Conread position: 145-415
Cow position: chrX:20340001-20339734 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 190, 17

Conread position: 145-415
Cow position: chrX:27228010-27228288 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 105

Conread position: 145-415
Cow position: chrX:38549339-38549607 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 166, 29

Conread position: 145-415
Cow position: chrX:42381215-42380951 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 52

Conread position: 145-417
Cow position: chrX:31294670-31294410 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 190, 33

Conread position: 145-417
Cow position: chrX:33493665-33493939 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 34

Conread position: 145-417
Cow position: chrX:41027044-41027321 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 100, 27

Conread position: 145-417
Cow position: chrX:41879045-41878772 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 67, 60

Conread position: 145-418
Cow position: chrX:38218598-38218879 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 95, 27

Conread position: 145-419
Cow position: chrX:4996488-4996749 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 184, 26

Conread position: 145-421
Cow position: chrX:10831606-10831322 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 188
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 98, 217

Conread position: 145-423
Cow position: chrX:5872204-5872483 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 30, 86

Conread position: 145-429
Cow position: chrX:27772074-27771796 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 173, 90

Conread position: 145-430
Cow position: chrX:9365788-9365501 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 190, 109

Conread position: 145-432
Cow position: chrX:4043965-4043690 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 192, 28

Conread position: 145-436
Cow position: chrX:27394132-27393845 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 27

Conread position: 146-411
Cow position: chrX:34505159-34504894 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 57

Conread position: 146-419
Cow position: chrX:45670115-45670384 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 105, 27

Conread position: 147-416
Cow position: chrX:45174738-45175011 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 112, 54

Conread position: 148-309
Cow position: chrX:19015328-19015487 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 111, 71

Conread position: 148-328
Cow position: chrX:31340598-31340780 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 131

Conread position: 148-333
Cow position: chrX:5638275-5638095 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 93, 42

Conread position: 148-361
Cow position: chrX:27680289-27680504 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 103, 45

Conread position: 148-375
Cow position: chrX:11856318-11856550 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 65

Conread position: 148-392
Cow position: chrX:37910336-37910581 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 109, 64

Conread position: 148-393
Cow position: chrX:29120936-29121185 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 92, 115

Conread position: 148-399
Cow position: chrX:7571794-7572050 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 23

Conread position: 148-399
Cow position: chrX:20801665-20801914 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 182, 83

Conread position: 148-399
Cow position: chrX:46587707-46587966 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 148-400
Cow position: chrX:23940135-23939904 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 148-407
Cow position: chrX:7721879-7722140 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 43

Conread position: 148-408
Cow position: chrX:11614589-11614847 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 26, 101

Conread position: 148-408
Cow position: chrX:45430126-45429868 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 184, 69

Conread position: 148-409
Cow position: chrX:5919386-5919649 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 96, 48

Conread position: 148-410
Cow position: chrX:6544146-6544407 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 70

Conread position: 148-411
Cow position: chrX:31436368-31436630 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 74

Conread position: 148-411
Cow position: chrX:41526631-41526373 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 60

Conread position: 148-411
Cow position: chrX:43567812-43568076 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 182, 98

Conread position: 148-413
Cow position: chrX:8869512-8869245 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 25

Conread position: 148-413
Cow position: chrX:46291029-46291300 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 102, 8

Conread position: 148-417
Cow position: chrX:45502042-45502308 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 104, 42

Conread position: 148-423
Cow position: chrX:28878279-28878007 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 22, 12

Conread position: 148-423
Cow position: chrX:29194124-29194398 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 185, 59

Conread position: 148-425
Cow position: chrX:17949600-17949323 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 192
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 97

Conread position: 148-425
Cow position: chrX:23563903-23563621 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 187
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 97

Conread position: 148-433
Cow position: chrX:13382219-13382503 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 23, 167

Conread position: 148-434
Cow position: chrX:47484378-47484086 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 187
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 226

Conread position: 148-439
Cow position: chrX:8797142-8797433 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 26, 184

Conread position: 148-446
Cow position: chrX:41884524-41884221 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 149-258
Cow position: chrX:11806122-11806012 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 149-387
Cow position: chrX:7277810-7278043 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 83, 26

Conread position: 149-388
Cow position: chrX:29229901-29230132 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 186, 92

Conread position: 149-395
Cow position: chrX:37986124-37986365 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 189
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 92, 47

Conread position: 149-406
Cow position: chrX:34565174-34565433 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 96, 26

Conread position: 149-409
Cow position: chrX:22074691-22074954 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 67

Conread position: 149-409
Cow position: chrX:33855342-33855066 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 96, 216

Conread position: 149-418
Cow position: chrX:37232304-37232570 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 97

Conread position: 149-432
Cow position: chrX:13647894-13647608 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 77

Conread position: 150-246
Cow position: chrX:4750412-4750316 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 150-368
Cow position: chrX:21004574-21004797 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 90, 74

Conread position: 150-386
Cow position: chrX:37574743-37574971 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 185, 45

Conread position: 151-315
Cow position: chrX:42874874-42875039 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 114

Conread position: 151-319
Cow position: chrX:16055104-16055274 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 81

Conread position: 151-357
Cow position: chrX:21642585-21642380 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 39

Conread position: 151-389
Cow position: chrX:34192566-34192790 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 151-394
Cow position: chrX:37119488-37119731 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 87, 21

Conread position: 151-399
Cow position: chrX:30133429-30133177 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 17, 225

Conread position: 151-399
Cow position: chrX:30962981-30962732 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 92

Conread position: 151-399
Cow position: chrX:31729336-31729586 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 32

Conread position: 151-399
Cow position: chrX:35885837-35885583 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 22, 83

Conread position: 151-411
Cow position: chrX:43730325-43730068 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 115, 69

Conread position: 151-419
Cow position: chrX:151795-152064 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 177
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 23, 86

Conread position: 151-423
Cow position: chrX:16416403-16416664 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 23, 42

Conread position: 151-425
Cow position: chrX:14599426-14599702 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 108, 85

Conread position: 151-444
Cow position: chrX:45414407-45414114 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 184, 94

Conread position: 152-419
Cow position: chrX:169646-169382 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 16, 45

Conread position: 152-453
Cow position: chrX:33639865-33640173 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 18, 44

Conread position: 155-355
Cow position: chrX:40826857-40826651 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 90

Conread position: 155-408
Cow position: chrX:33000800-33001060 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 95, 0

Conread position: 155-413
Cow position: chrX:34376844-34377098 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 180, 42

Conread position: 158-389
Cow position: chrX:35224196-35224431 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 177, 90

Conread position: 158-393
Cow position: chrX:30543387-30543146 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 101, 14

Conread position: 158-399
Cow position: chrX:21327803-21328057 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 105

Conread position: 158-410
Cow position: chrX:34313929-34314179 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 124

Conread position: 158-411
Cow position: chrX:16348670-16348415 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 157

Conread position: 158-453
Cow position: chrX:7718756-7719030 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 56, 0

Conread position: 159-405
Cow position: chrX:23113176-23113436 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 52

Conread position: 159-415
Cow position: chrX:31489423-31489680 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 176, 14

Conread position: 160-333
Cow position: chrX:1572235-1572065 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 160-346
Cow position: chrX:48201198-48201384 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 154, 79

Conread position: 160-415
Cow position: chrX:9252257-9252004 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 11

Conread position: 161-387
Cow position: chrX:31515072-31515306 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 78, 64

Conread position: 161-415
Cow position: chrX:10516159-10516413 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 91, 33

Conread position: 161-419
Cow position: chrX:36067918-36068179 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 17

Conread position: 162-390
Cow position: chrX:47248880-47248643 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 62

Conread position: 162-408
Cow position: chrX:34837150-34836909 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 192
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 173, 32

Conread position: 162-419
Cow position: chrX:29549644-29549386 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 162

Conread position: 163-395
Cow position: chrX:38560462-38560699 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 44, 75

Conread position: 163-414
Cow position: chrX:38208637-38208386 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 121, 19

Conread position: 164-414
Cow position: chrX:20168464-20168716 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 171, 84

Conread position: 165-413
Cow position: chrX:6413955-6414197 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 90

Conread position: 165-415
Cow position: chrX:31250293-31250548 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 166-398
Cow position: chrX:44054715-44054945 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 158
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 169, 76

Conread position: 166-403
Cow position: chrX:45648781-45649030 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 95, 44

Conread position: 166-414
Cow position: chrX:161321-161569 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 164, 69

Conread position: 166-415
Cow position: chrX:1466069-1466319 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 234

Conread position: 166-419
Cow position: chrX:46532592-46532331 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 74, 9

Conread position: 166-483
Cow position: chrX:37129177-37129497 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 87, 26

Conread position: 167-357
Cow position: chrX:4296910-4296723 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 168, 75

Conread position: 167-398
Cow position: chrX:918818-918571 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 187
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 90, 0

Conread position: 167-399
Cow position: chrX:43527420-43527652 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 157
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 168, 9

Conread position: 167-405
Cow position: chrX:5900378-5900612 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 170, 81

Conread position: 167-407
Cow position: chrX:29050156-29050400 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 167-413
Cow position: chrX:27261097-27261350 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 32, 36

Conread position: 167-415
Cow position: chrX:27705496-27705746 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 163, 69

Conread position: 167-415
Cow position: chrX:36975861-36976111 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 78, 24

Conread position: 167-419
Cow position: chrX:25035470-25035222 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 94, 77

Conread position: 167-422
Cow position: chrX:42873303-42873552 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 167, 65

Conread position: 168-398
Cow position: chrX:42855365-42855601 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 84, 56

Conread position: 168-411
Cow position: chrX:7710628-7710382 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 162, 87

Conread position: 169-415
Cow position: chrX:11633591-11633841 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 228

Conread position: 172-415
Cow position: chrX:40680525-40680774 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 172-477
Cow position: chrX:23562549-23562859 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 163, 48

Conread position: 175-399
Cow position: chrX:41192625-41192848 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 160, 43

Conread position: 177-419
Cow position: chrX:39219999-39220245 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 88, 36

Conread position: 178-383
Cow position: chrX:11455127-11454921 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 67, 156

Conread position: 178-398
Cow position: chrX:41238431-41238212 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 157, 31

Conread position: 178-399
Cow position: chrX:45598681-45598461 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 157, 78

Conread position: 178-405
Cow position: chrX:36514974-36514743 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 152, 219

Conread position: 178-411
Cow position: chrX:5135605-5135364 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 72, 216

Conread position: 178-422
Cow position: chrX:18273138-18272892 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 63, 80

Conread position: 179-411
Cow position: chrX:22115396-22115162 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 84

Conread position: 180-413
Cow position: chrX:4515606-4515847 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 186
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 63, 77

Conread position: 185-410
Cow position: chrX:1088209-1087986 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 72, 35

Conread position: 188-399
Cow position: chrX:4153105-4152887 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 189-420
Cow position: chrX:32623498-32623735 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 197

Conread position: 190-360
Cow position: chrX:41111653-41111821 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 144, 71

Conread position: 194-427
Cow position: chrX:15820533-15820768 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 140, 68

Conread position: 197-387
Cow position: chrX:23561800-23561990 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 139, 51

Conread position: 197-410
Cow position: chrX:19097283-19097065 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 105, 51

Conread position: 197-415
Cow position: chrX:20957187-20957398 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 138, 50

Conread position: 198-395
Cow position: chrX:39352720-39352925 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 103

Conread position: 198-403
Cow position: chrX:46429881-46429671 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 170
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 6, 17

Conread position: 198-409
Cow position: chrX:27511367-27511582 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 58

Conread position: 199-387
Cow position: chrX:12082384-12082192 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 52, 123

Conread position: 200-406
Cow position: chrX:22915094-22914891 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 135, 23

Conread position: 201-407
Cow position: chrX:12437327-12437120 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 134, 47

Conread position: 201-409
Cow position: chrX:23091811-23092027 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 62, 23

Conread position: 201-413
Cow position: chrX:31627038-31626821 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 50, 127

Conread position: 201-417
Cow position: chrX:19469563-19469346 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 134, 54

Conread position: 202-415
Cow position: chrX:32978133-32977926 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 135, 46

Conread position: 202-422
Cow position: chrX:44192505-44192277 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 203-414
Cow position: chrX:5134420-5134631 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 132, 45

Conread position: 203-419
Cow position: chrX:44339379-44339161 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 115

Conread position: 204-417
Cow position: chrX:35985764-35985979 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 98

Conread position: 205-395
Cow position: chrX:25328659-25328475 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 130, 39

Conread position: 206-416
Cow position: chrX:18964876-18964667 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 12

Conread position: 209-399
Cow position: chrX:19943286-19943092 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 209-411
Cow position: chrX:22393035-22392829 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 166
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 52, 175

Conread position: 212-407
Cow position: chrX:37072348-37072541 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 123, 24

Conread position: 213-409
Cow position: chrX:27306407-27306608 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 214-389
Cow position: chrX:2523722-2523548 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 122, 34

Conread position: 214-411
Cow position: chrX:6599828-6599626 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 45, 0

Conread position: 215-408
Cow position: chrX:11326143-11325946 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 159
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 50, 154

Conread position: 217-413
Cow position: chrX:19394511-19394714 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 118, 0

Conread position: 218-408
Cow position: chrX:4289399-4289596 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 40, 187

Conread position: 220-413
Cow position: chrX:38642211-38642406 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 116, 34

Conread position: 220-431
Cow position: chrX:40532082-40531867 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 28

Conread position: 222-384
Cow position: chrX:29585084-29585248 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 113, 40

Conread position: 222-393
Cow position: chrX:47061358-47061534 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 222-411
Cow position: chrX:16984591-16984796 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 163
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 160

Conread position: 222-417
Cow position: chrX:24749051-24749248 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 115, 0

Conread position: 224-396
Cow position: chrX:29553251-29553426 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 10

Conread position: 224-413
Cow position: chrX:17956661-17956846 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 111, 21

Conread position: 224-413
Cow position: chrX:28940212-28940403 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 111, 9

Conread position: 224-428
Cow position: chrX:42893883-42894098 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 192

Conread position: 229-411
Cow position: chrX:23498707-23498524 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 14, 28

Conread position: 231-445
Cow position: chrX:20743575-20743793 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 172

Conread position: 232-483
Cow position: chrX:4616035-4615771 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 16

Conread position: 240-417
Cow position: chrX:12972664-12972847 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 14

Conread position: 242-413
Cow position: chrX:24633667-24633853 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 243-411
Cow position: chrX:36848596-36848423 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 15, 82

Conread position: 243-417
Cow position: chrX:32943093-32942916 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 147

Conread position: 245-408
Cow position: chrX:16836299-16836136 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 92, 16

Conread position: 248-387
Cow position: chrX:45383057-45382914 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 78

Conread position: 248-413
Cow position: chrX:3806670-3806839 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 12, 154

Conread position: 249-416
Cow position: chrX:23188790-23188623 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 88, 67

Conread position: 250-395
Cow position: chrX:4466958-4467107 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 85, 0

Conread position: 250-405
Cow position: chrX:47079618-47079777 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 254-410
Cow position: chrX:23088850-23089007 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 14, 49

Conread position: 254-416
Cow position: chrX:42506232-42506072 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 255-399
Cow position: chrX:46070177-46070024 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 255-411
Cow position: chrX:12191757-12191916 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 255-415
Cow position: chrX:38587847-38587683 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 256-399
Cow position: chrX:32208825-32208679 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 79, 94

Conread position: 256-408
Cow position: chrX:42160624-42160776 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 81, 15

Conread position: 256-409
Cow position: chrX:39290356-39290511 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 79, 132

Conread position: 257-407
Cow position: chrX:42479831-42479984 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 78, 139

Conread position: 259-399
Cow position: chrX:29501881-29501740 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 76, 30

Conread position: 259-413
Cow position: chrX:27668958-27668802 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 136
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 76, 145

Conread position: 260-421
Cow position: chrX:2935958-2936122 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 76, 135

Conread position: 263-408
Cow position: chrX:4559743-4559886 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 74, 43

Conread position: 263-409
Cow position: chrX:10252194-10252047 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 43, 136

Conread position: 269-410
Cow position: chrX:23266425-23266569 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 66, 127

Conread position: 271-389
Cow position: chrX:41862376-41862497 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 31

Conread position: 272-403
Cow position: chrX:29467765-29467630 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 273-422
Cow position: chrX:38301823-38301976 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 273-429
Cow position: chrX:47342130-47342289 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 275-403
Cow position: chrX:41164630-41164759 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 275-411
Cow position: chrX:20583682-20583822 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 275-413
Cow position: chrX:31479987-31480125 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 59, 127

Conread position: 276-478
Cow position: chrX:21443707-21443504 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 135, 53

Conread position: 277-415
Cow position: chrX:28098344-28098487 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 277-427
Cow position: chrX:34508562-34508716 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 129
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 58, 0

Conread position: 278-480
Cow position: chrX:7513507-7513710 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 49

Conread position: 278-481
Cow position: chrX:27667444-27667642 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 6, 13

Conread position: 279-480
Cow position: chrX:6850229-6850422 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 15, 117

Conread position: 281-387
Cow position: chrX:20340621-20340511 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 283-439
Cow position: chrX:44926480-44926641 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 284-409
Cow position: chrX:32866900-32867029 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 109
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 284-414
Cow position: chrX:35383011-35382876 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 285-400
Cow position: chrX:21573599-21573716 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 50, 69

Conread position: 285-415
Cow position: chrX:23359085-23358956 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 113
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 52, 116

Conread position: 286-395
Cow position: chrX:5026283-5026396 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 287-409
Cow position: chrX:40046547-40046424 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 289-395
Cow position: chrX:4942228-4942118 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 289-415
Cow position: chrX:8326934-8327064 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 289-483
Cow position: chrX:41939853-41940048 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 106

Conread position: 294-415
Cow position: chrX:5487897-5487779 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 294-483
Cow position: chrX:23574690-23574887 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 302-428
Cow position: chrX:31983542-31983412 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 336-425
Cow position: chrX:13785141-13785052 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 80
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 336-442
Cow position: chrX:42147921-42148032 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 37, 0

Show alignments to all cow chromosomes.