Cow genome map


           Conread name:
           rsto236_j17.y1
        

               Conread position:
               1-378
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 79
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 99
               

               Conread position:
               3-151
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-151
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               3-162
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               3-212
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               150, 199
               

               Conread position:
               3-227
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               150, 23
               

               Conread position:
               3-227
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               150, 23
               

               Conread position:
               3-228
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               150, 36
               

               Conread position:
               3-301
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               167, 65
               

               Conread position:
               3-301
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               105, 30
               

               Conread position:
               3-356
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               150, 74
               

               Conread position:
               3-377
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 233
               

               Conread position:
               3-412
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 39
               

               Conread position:
               3-442
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 67
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               303
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               130, 27
               

               Conread position:
               3-452
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 207
               

               Conread position:
               3-461
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 29
               

               Conread position:
               3-469
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 75
               

               Conread position:
               3-470
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 101
               

               Conread position:
               3-470
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 69
               

               Conread position:
               4-446
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 165
               

               Conread position:
               5-255
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               143, 41
               

               Conread position:
               6-151
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               127, 27
               

               Conread position:
               6-470
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 71
               

               Conread position:
               7-470
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 86
               

               Conread position:
               9-138
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               9-442
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 19
               

               Conread position:
               10-162
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               10-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               151, 199
               

               Conread position:
               10-323
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               151, 86
               

               Conread position:
               10-412
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               273
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               145, 202
               

               Conread position:
               10-444
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               293
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               103, 91
               

               Conread position:
               10-470
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 111
               

               Conread position:
               12-216
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               144, 68
               

               Conread position:
               14-425
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               100, 63
               

               Conread position:
               14-436
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 99
               

               Conread position:
               14-452
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 299
               

               Conread position:
               14-452
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 29
               

               Conread position:
               14-467
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 84
               

               Conread position:
               14-470
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               328, 147
               

               Conread position:
               15-414
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 220
               

               Conread position:
               16-306
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               136, 204
               

               Conread position:
               16-413
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 150
               

               Conread position:
               16-447
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               305
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               181, 10
               

               Conread position:
               22-437
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 51
               

               Conread position:
               23-255
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               26-408
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               264
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               88, 71
               

               Conread position:
               26-469
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 194
               

               Conread position:
               28-470
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 192
               

               Conread position:
               29-289
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               192, 43
               

               Conread position:
               29-452
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 107
               

               Conread position:
               31-446
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               289
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               84, 71
               

               Conread position:
               36-465
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 41
               

               Conread position:
               37-402
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               244
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               77, 82
               

               Conread position:
               41-419
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               183, 73
               

               Conread position:
               43-421
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 71
               

               Conread position:
               44-438
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               280
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               71, 30
               

               Conread position:
               45-451
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               280
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               284, 41
               

               Conread position:
               50-317
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 42
               

               Conread position:
               58-304
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               42, 159
               

               Conread position:
               61-431
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 131
               

               Conread position:
               94-298
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 184
               

               Conread position:
               96-470
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               101-341
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               50, 35
               

               Conread position:
               101-351
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               68, 19
               

               Conread position:
               110-446
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               250
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               46, 5
               

               Conread position:
               115-465
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               255
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               43, 106
               

               Conread position:
               119-434
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               36, 80
               

               Conread position:
               160-470
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               64, 74
               

               Conread position:
               168-470
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               281, 40
               

               Conread position:
               168-470
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               174-454
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               47, 33
               

               Conread position:
               178-379
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               48, 15
               

               Conread position:
               186-450
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               85, 160
               

               Conread position:
               193-431
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 11
               

               Conread position:
               197-433
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               10, 84
               

               Conread position:
               197-470
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               203-470
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               211
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               205-470
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               30, 16
               
Show alignments to all cow chromosomes.