Cow genome map

Conread name: rsto236_j17.y1

Conread position: 1-451
Cow position: chr11:35251823-35252273 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 71

Conread position: 1-470
Cow position: chr11:26787587-26787132 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 130

Conread position: 3-184
Cow position: chr11:18154081-18154268 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 70, 0

Conread position: 3-216
Cow position: chr11:9424082-9423864 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 150, 115

Conread position: 3-256
Cow position: chr11:43435307-43435057 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 164
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 163, 0

Conread position: 3-384
Cow position: chr11:12790969-12790567 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 11

Conread position: 3-410
Cow position: chr11:25185394-25184993 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 274
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 151, 31

Conread position: 3-425
Cow position: chr11:17192107-17192546 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 128

Conread position: 3-429
Cow position: chr11:24008251-24007819 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 93

Conread position: 3-446
Cow position: chr11:5221260-5221702 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 192

Conread position: 3-447
Cow position: chr11:33103482-33103922 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 183

Conread position: 3-448
Cow position: chr11:60822567-60823014 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 12

Conread position: 3-452
Cow position: chr11:10877418-10876946 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 77

Conread position: 3-452
Cow position: chr11:69491588-69491107 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 74

Conread position: 3-469
Cow position: chr11:77772517-77772992 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 88

Conread position: 3-470
Cow position: chr11:39831053-39831507 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 137

Conread position: 4-205
Cow position: chr11:55119642-55119446 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 160, 29

Conread position: 4-233
Cow position: chr11:25972742-25972974 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 149, 189

Conread position: 4-267
Cow position: chr11:21121414-21121159 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 20

Conread position: 4-431
Cow position: chr11:77756592-77757013 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 285
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 272, 116

Conread position: 6-421
Cow position: chr11:51177647-51177242 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 284
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 162, 66

Conread position: 6-465
Cow position: chr11:59429995-59430447 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 307
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 78, 150

Conread position: 14-211
Cow position: chr11:52859620-52859414 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 14-427
Cow position: chr11:57062034-57061610 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 294
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 142, 88

Conread position: 14-431
Cow position: chr11:58313397-58312970 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 19

Conread position: 14-436
Cow position: chr11:41727056-41726636 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 284
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 147, 201

Conread position: 14-446
Cow position: chr11:70521658-70522111 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 305
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 65, 167

Conread position: 14-452
Cow position: chr11:87169457-87169904 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 160

Conread position: 14-464
Cow position: chr11:49410200-49410636 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 59

Conread position: 15-288
Cow position: chr11:23738627-23738891 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 105

Conread position: 26-340
Cow position: chr11:85537701-85537390 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 215
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 62

Conread position: 32-341
Cow position: chr11:12897133-12896827 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 89

Conread position: 32-366
Cow position: chr11:43831653-43831990 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 233
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 121, 5

Conread position: 33-469
Cow position: chr11:29004577-29004129 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 195

Conread position: 49-465
Cow position: chr11:81336850-81337279 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 170

Conread position: 80-463
Cow position: chr11:77763642-77764039 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 30

Conread position: 92-465
Cow position: chr11:61845939-61846311 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 267
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 42, 65

Conread position: 94-470
Cow position: chr11:49074226-49074603 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 252
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 248, 91

Conread position: 108-470
Cow position: chr11:53452281-53452653 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 17

Conread position: 153-469
Cow position: chr11:34023890-34023557 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 79, 62

Conread position: 160-415
Cow position: chr11:42792963-42793230 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 110, 49

Conread position: 164-452
Cow position: chr11:58614666-58614369 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 224
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 106, 55

Conread position: 169-465
Cow position: chr11:28691755-28692059 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 28

Conread position: 174-462
Cow position: chr11:3393213-3393512 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 61, 52

Conread position: 174-465
Cow position: chr11:18588590-18588885 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 165, 49

Conread position: 174-469
Cow position: chr11:6154405-6154104 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 200
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 84, 41

Conread position: 174-470
Cow position: chr11:43644104-43644411 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 31, 19

Conread position: 181-356
Cow position: chr11:25856143-25855966 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 42

Conread position: 181-452
Cow position: chr11:46399117-46398836 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 52, 44

Conread position: 192-360
Cow position: chr11:48011977-48012149 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 156

Show alignments to all cow chromosomes.