Cow genome map
Conread name: | rsto236_j17.y1 |
Conread position: | 1-451 |
Cow position: | chr11:35251823-35252273 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 71 |
Conread position: | 1-470 |
Cow position: | chr11:26787587-26787132 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 130 |
Conread position: | 3-184 |
Cow position: | chr11:18154081-18154268 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 141 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 3-216 |
Cow position: | chr11:9424082-9423864 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 162 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 150, 115 |
Conread position: | 3-256 |
Cow position: | chr11:43435307-43435057 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 164 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 163, 0 |
Conread position: | 3-384 |
Cow position: | chr11:12790969-12790567 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 11 |
Conread position: | 3-410 |
Cow position: | chr11:25185394-25184993 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 274 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 151, 31 |
Conread position: | 3-425 |
Cow position: | chr11:17192107-17192546 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 128 |
Conread position: | 3-429 |
Cow position: | chr11:24008251-24007819 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 93 |
Conread position: | 3-446 |
Cow position: | chr11:5221260-5221702 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 192 |
Conread position: | 3-447 |
Cow position: | chr11:33103482-33103922 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 183 |
Conread position: | 3-448 |
Cow position: | chr11:60822567-60823014 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 167, 12 |
Conread position: | 3-452 |
Cow position: | chr11:10877418-10876946 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 77 |
Conread position: | 3-452 |
Cow position: | chr11:69491588-69491107 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 74 |
Conread position: | 3-469 |
Cow position: | chr11:77772517-77772992 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 88 |
Conread position: | 3-470 |
Cow position: | chr11:39831053-39831507 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 137 |
Conread position: | 4-205 |
Cow position: | chr11:55119642-55119446 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 149 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 160, 29 |
Conread position: | 4-233 |
Cow position: | chr11:25972742-25972974 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 167 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 149, 189 |
Conread position: | 4-267 |
Cow position: | chr11:21121414-21121159 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 191 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 34, 20 |
Conread position: | 4-431 |
Cow position: | chr11:77756592-77757013 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 285 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 272, 116 |
Conread position: | 6-421 |
Cow position: | chr11:51177647-51177242 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 284 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 162, 66 |
Conread position: | 6-465 |
Cow position: | chr11:59429995-59430447 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 307 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 78, 150 |
Conread position: | 14-211 |
Cow position: | chr11:52859620-52859414 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 149 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 14-427 |
Cow position: | chr11:57062034-57061610 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 294 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 142, 88 |
Conread position: | 14-431 |
Cow position: | chr11:58313397-58312970 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 19 |
Conread position: | 14-436 |
Cow position: | chr11:41727056-41726636 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 284 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 147, 201 |
Conread position: | 14-446 |
Cow position: | chr11:70521658-70522111 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 305 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 65, 167 |
Conread position: | 14-452 |
Cow position: | chr11:87169457-87169904 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 160 |
Conread position: | 14-464 |
Cow position: | chr11:49410200-49410636 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 215, 59 |
Conread position: | 15-288 |
Cow position: | chr11:23738627-23738891 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 203 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 16, 105 |
Conread position: | 26-340 |
Cow position: | chr11:85537701-85537390 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 215 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 94, 62 |
Conread position: | 32-341 |
Cow position: | chr11:12897133-12896827 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 89 |
Conread position: | 32-366 |
Cow position: | chr11:43831653-43831990 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 233 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 121, 5 |
Conread position: | 33-469 |
Cow position: | chr11:29004577-29004129 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 195 |
Conread position: | 49-465 |
Cow position: | chr11:81336850-81337279 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 170 |
Conread position: | 80-463 |
Cow position: | chr11:77763642-77764039 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 30 |
Conread position: | 92-465 |
Cow position: | chr11:61845939-61846311 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 267 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 42, 65 |
Conread position: | 94-470 |
Cow position: | chr11:49074226-49074603 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 252 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 248, 91 |
Conread position: | 108-470 |
Cow position: | chr11:53452281-53452653 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 17 |
Conread position: | 153-469 |
Cow position: | chr11:34023890-34023557 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 235 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 79, 62 |
Conread position: | 160-415 |
Cow position: | chr11:42792963-42793230 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 184 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 110, 49 |
Conread position: | 164-452 |
Cow position: | chr11:58614666-58614369 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 224 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 106, 55 |
Conread position: | 169-465 |
Cow position: | chr11:28691755-28692059 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 213 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 47, 28 |
Conread position: | 174-462 |
Cow position: | chr11:3393213-3393512 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 214 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 61, 52 |
Conread position: | 174-465 |
Cow position: | chr11:18588590-18588885 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 209 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 165, 49 |
Conread position: | 174-469 |
Cow position: | chr11:6154405-6154104 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 200 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 84, 41 |
Conread position: | 174-470 |
Cow position: | chr11:43644104-43644411 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 217 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 31, 19 |
Conread position: | 181-356 |
Cow position: | chr11:25856143-25855966 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 136 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 51, 42 |
Conread position: | 181-452 |
Cow position: | chr11:46399117-46398836 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 203 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 52, 44 |
Conread position: | 192-360 |
Cow position: | chr11:48011977-48012149 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 125 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 14, 156 |
Show alignments to all cow chromosomes.