Cow genome map
| Conread name: | rsto236_j17.y1 |
| Conread position: | 1-360 |
| Cow position: | chr12:32221818-32221441 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 118, 196 |
| Conread position: | 2-378 |
| Cow position: | chr12:34825536-34825164 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 146, 16 |
| Conread position: | 3-216 |
| Cow position: | chr12:33278059-33277844 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 165, 111 |
| Conread position: | 3-223 |
| Cow position: | chr12:27423408-27423186 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 129, 140 |
| Conread position: | 3-224 |
| Cow position: | chr12:11306444-11306663 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 165, 70 |
| Conread position: | 3-224 |
| Cow position: | chr12:37806322-37806109 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 3-298 |
| Cow position: | chr12:23498280-23498004 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 167, 30 |
| Conread position: | 3-312 |
| Cow position: | chr12:21066347-21066038 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 161, 23 |
| Conread position: | 3-414 |
| Cow position: | chr12:12982713-12983144 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 171 |
| Conread position: | 3-430 |
| Cow position: | chr12:10161810-10162244 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 215 |
| Conread position: | 3-434 |
| Cow position: | chr12:22474118-22473670 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 46 |
| Conread position: | 3-451 |
| Cow position: | chr12:16961750-16961297 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 25 |
| Conread position: | 3-470 |
| Cow position: | chr12:25514032-25513588 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 66 |
| Conread position: | 4-470 |
| Cow position: | chr12:26527509-26527057 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 323 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 157, 66 |
| Conread position: | 6-213 |
| Cow position: | chr12:29760490-29760704 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 6-256 |
| Cow position: | chr12:23892673-23892422 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 132, 52 |
| Conread position: | 14-335 |
| Cow position: | chr12:32675590-32675901 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 59, 84 |
| Conread position: | 14-350 |
| Cow position: | chr12:18544773-18544439 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 106 |
| Conread position: | 14-370 |
| Cow position: | chr12:29842900-29842548 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 147, 192 |
| Conread position: | 16-228 |
| Cow position: | chr12:37510505-37510719 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 97, 105 |
| Conread position: | 16-327 |
| Cow position: | chr12:29494525-29494836 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 132, 83 |
| Conread position: | 34-306 |
| Cow position: | chr12:12711102-12711381 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 118, 25 |
| Conread position: | 38-445 |
| Cow position: | chr12:10028997-10028588 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 293 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 5, 100 |
| Conread position: | 50-292 |
| Cow position: | chr12:10687830-10688072 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 60, 47 |
| Conread position: | 108-412 |
| Cow position: | chr12:28559342-28559024 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 51, 12 |
| Conread position: | 173-438 |
| Cow position: | chr12:5906032-5905760 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 71, 41 |
| Conread position: | 173-469 |
| Cow position: | chr12:33403049-33403340 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 44, 56 |
| Conread position: | 173-470 |
| Cow position: | chr12:6489012-6489303 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 98, 42 |
| Conread position: | 174-439 |
| Cow position: | chr12:6164047-6164327 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 49, 40 |
| Conread position: | 174-465 |
| Cow position: | chr12:15258742-15259037 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 96 |
| Conread position: | 174-470 |
| Cow position: | chr12:47799847-47800142 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 44, 30 |
| Conread position: | 183-470 |
| Cow position: | chr12:24028270-24028559 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 115, 43 |
| Conread position: | 192-421 |
| Cow position: | chr12:6117864-6117626 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 196 |
| Conread position: | 192-470 |
| Cow position: | chr12:16851047-16851338 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 215 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 32, 255 |
| Conread position: | 193-427 |
| Cow position: | chr12:18417530-18417277 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 210 |
| Conread position: | 213-465 |
| Cow position: | chr12:20316579-20316831 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 85, 52 |
Show alignments to all cow chromosomes.