Cow genome map
| Conread name: | rsto236_j17.y1 |
| Conread position: | 1-439 |
| Cow position: | chr14:37983554-37983094 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 73 |
| Conread position: | 1-468 |
| Cow position: | chr14:21864182-21863698 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 219 |
| Conread position: | 1-469 |
| Cow position: | chr14:12643906-12643421 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 93 |
| Conread position: | 3-121 |
| Cow position: | chr14:45185199-45185317 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-134 |
| Cow position: | chr14:44454310-44454438 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 3-162 |
| Cow position: | chr14:41712869-41713028 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-168 |
| Cow position: | chr14:31810494-31810654 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 3-194 |
| Cow position: | chr14:44886400-44886601 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 3-207 |
| Cow position: | chr14:47880275-47880067 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 158, 69 |
| Conread position: | 3-292 |
| Cow position: | chr14:14419231-14419500 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 229, 104 |
| Conread position: | 3-301 |
| Cow position: | chr14:25994106-25993824 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 3-320 |
| Cow position: | chr14:40244024-40244339 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 25 |
| Conread position: | 3-387 |
| Cow position: | chr14:46546134-46545752 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 285, 123 |
| Conread position: | 3-447 |
| Cow position: | chr14:9255454-9255001 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 101 |
| Conread position: | 3-452 |
| Cow position: | chr14:35936644-35936204 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 194, 163 |
| Conread position: | 3-452 |
| Cow position: | chr14:47044016-47043567 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 38 |
| Conread position: | 3-470 |
| Cow position: | chr14:10156549-10157039 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 111 |
| Conread position: | 3-470 |
| Cow position: | chr14:44483199-44482726 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 28 |
| Conread position: | 3-470 |
| Cow position: | chr14:45018646-45018168 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 34 |
| Conread position: | 4-428 |
| Cow position: | chr14:14835283-14834835 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 90 |
| Conread position: | 5-470 |
| Cow position: | chr14:40722068-40721595 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 323 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 148, 46 |
| Conread position: | 6-213 |
| Cow position: | chr14:2299061-2298847 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 7-438 |
| Cow position: | chr14:35605458-35605010 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 311 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 92, 63 |
| Conread position: | 10-254 |
| Cow position: | chr14:38000382-38000639 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 150, 13 |
| Conread position: | 10-446 |
| Cow position: | chr14:3588579-3588143 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 29 |
| Conread position: | 10-447 |
| Cow position: | chr14:40737800-40737366 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 60 |
| Conread position: | 10-468 |
| Cow position: | chr14:24988984-24989426 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 318 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 104, 221 |
| Conread position: | 14-317 |
| Cow position: | chr14:9051102-9051408 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 88, 128 |
| Conread position: | 14-402 |
| Cow position: | chr14:28007477-28007874 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 274 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 147, 53 |
| Conread position: | 14-421 |
| Cow position: | chr14:3436851-3437275 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 105 |
| Conread position: | 14-472 |
| Cow position: | chr14:27578926-27578449 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 31 |
| Conread position: | 23-137 |
| Cow position: | chr14:38546278-38546164 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-423 |
| Cow position: | chr14:27988526-27988934 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 138 |
| Conread position: | 28-431 |
| Cow position: | chr14:18985018-18984609 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 32 |
| Conread position: | 32-301 |
| Cow position: | chr14:40164755-40165029 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 75, 195 |
| Conread position: | 33-365 |
| Cow position: | chr14:32581496-32581152 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 122, 43 |
| Conread position: | 34-341 |
| Cow position: | chr14:42103128-42103441 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 134, 14 |
| Conread position: | 42-432 |
| Cow position: | chr14:25362236-25362643 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 49 |
| Conread position: | 46-434 |
| Cow position: | chr14:44772116-44772516 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 284 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 94, 27 |
| Conread position: | 49-470 |
| Cow position: | chr14:39807561-39807127 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 76 |
| Conread position: | 54-470 |
| Cow position: | chr14:39616992-39616576 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 59 |
| Conread position: | 92-435 |
| Cow position: | chr14:39302417-39302064 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 140 |
| Conread position: | 103-337 |
| Cow position: | chr14:42693883-42694124 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 104-470 |
| Cow position: | chr14:10906681-10907054 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 16 |
| Conread position: | 108-413 |
| Cow position: | chr14:25378539-25378214 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 12 |
| Conread position: | 110-446 |
| Cow position: | chr14:8488146-8488494 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 16 |
| Conread position: | 167-439 |
| Cow position: | chr14:42260521-42260254 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 64, 58 |
| Conread position: | 168-457 |
| Cow position: | chr14:26410528-26410820 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 43 |
| Conread position: | 168-470 |
| Cow position: | chr14:14307819-14308119 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 13 |
| Conread position: | 170-407 |
| Cow position: | chr14:15514038-15514290 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 100, 14 |
| Conread position: | 174-470 |
| Cow position: | chr14:20640601-20640286 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 174-470 |
| Cow position: | chr14:21018138-21018448 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 55, 19 |
| Conread position: | 176-447 |
| Cow position: | chr14:20745608-20745868 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 181-395 |
| Cow position: | chr14:34777542-34777320 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 181-470 |
| Cow position: | chr14:31888669-31888377 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 50, 33 |
| Conread position: | 191-468 |
| Cow position: | chr14:35358774-35359043 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 8, 21 |
| Conread position: | 215-443 |
| Cow position: | chr14:26097625-26097381 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 65, 212 |
| Conread position: | 228-446 |
| Cow position: | chr14:44252990-44253204 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 52, 43 |
Show alignments to all cow chromosomes.