Cow genome map
| Conread name: | rsto236_j17.y1 |
| Conread position: | 1-217 |
| Cow position: | chr15:37491835-37492054 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 114 |
| Conread position: | 1-470 |
| Cow position: | chr15:37470108-37470571 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 61 |
| Conread position: | 1-472 |
| Cow position: | chr15:18715144-18715614 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 62 |
| Conread position: | 3-166 |
| Cow position: | chr15:14974327-14974489 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 141, 76 |
| Conread position: | 3-203 |
| Cow position: | chr15:25683547-25683340 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 3-213 |
| Cow position: | chr15:14811344-14811551 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 137, 17 |
| Conread position: | 3-213 |
| Cow position: | chr15:53728420-53728621 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 122, 25 |
| Conread position: | 3-217 |
| Cow position: | chr15:39288212-39288434 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 3-325 |
| Cow position: | chr15:43275392-43275065 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 87, 113 |
| Conread position: | 3-426 |
| Cow position: | chr15:10581256-10580824 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 38 |
| Conread position: | 3-443 |
| Cow position: | chr15:4623383-4623829 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 60 |
| Conread position: | 3-468 |
| Cow position: | chr15:40065795-40065319 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 78 |
| Conread position: | 3-470 |
| Cow position: | chr15:9072549-9072050 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 402 |
| Conread position: | 3-470 |
| Cow position: | chr15:23265641-23265177 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 202 |
| Conread position: | 5-136 |
| Cow position: | chr15:11997589-11997460 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 6-153 |
| Cow position: | chr15:17642059-17641912 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-386 |
| Cow position: | chr15:52868683-52868304 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 268 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 147, 112 |
| Conread position: | 10-415 |
| Cow position: | chr15:11288985-11289394 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 21 |
| Conread position: | 10-449 |
| Cow position: | chr15:31918121-31918578 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 60 |
| Conread position: | 10-451 |
| Cow position: | chr15:44797434-44797886 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 177 |
| Conread position: | 14-309 |
| Cow position: | chr15:1892837-1893132 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 108, 20 |
| Conread position: | 14-444 |
| Cow position: | chr15:21802258-21801817 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 16 |
| Conread position: | 14-468 |
| Cow position: | chr15:25825931-25825478 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 69 |
| Conread position: | 14-472 |
| Cow position: | chr15:22713922-22713448 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 68 |
| Conread position: | 15-470 |
| Cow position: | chr15:53712683-53712227 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 116 |
| Conread position: | 16-426 |
| Cow position: | chr15:5442465-5442056 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 99, 42 |
| Conread position: | 16-429 |
| Cow position: | chr15:6523591-6523996 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 72 |
| Conread position: | 17-293 |
| Cow position: | chr15:5912583-5912858 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 206 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 121, 200 |
| Conread position: | 31-298 |
| Cow position: | chr15:23171934-23172194 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 116, 67 |
| Conread position: | 42-470 |
| Cow position: | chr15:27627892-27627443 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 299 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 73, 47 |
| Conread position: | 76-470 |
| Cow position: | chr15:37985569-37985176 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 45 |
| Conread position: | 89-435 |
| Cow position: | chr15:36278259-36278634 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 255 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 75, 193 |
| Conread position: | 92-341 |
| Cow position: | chr15:16946833-16946575 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 95-442 |
| Cow position: | chr15:28070489-28070839 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 73, 117 |
| Conread position: | 106-367 |
| Cow position: | chr15:22967195-22966930 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 89, 109 |
| Conread position: | 108-415 |
| Cow position: | chr15:3571782-3572100 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 49, 12 |
| Conread position: | 108-439 |
| Cow position: | chr15:17213461-17213803 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 60, 12 |
| Conread position: | 121-439 |
| Cow position: | chr15:53118342-53118669 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 43, 69 |
| Conread position: | 168-341 |
| Cow position: | chr15:27972377-27972558 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 102, 30 |
| Conread position: | 168-443 |
| Cow position: | chr15:13691310-13691037 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 51, 99 |
| Conread position: | 168-461 |
| Cow position: | chr15:36043182-36043496 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 88, 60 |
| Conread position: | 169-426 |
| Cow position: | chr15:40498223-40497978 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 24 |
| Conread position: | 172-470 |
| Cow position: | chr15:35041804-35041496 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 37, 57 |
| Conread position: | 173-446 |
| Cow position: | chr15:37632809-37632519 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 216 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 48, 56 |
| Conread position: | 173-469 |
| Cow position: | chr15:1830636-1830946 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 231 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 98, 19 |
| Conread position: | 174-380 |
| Cow position: | chr15:40117374-40117175 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 49, 24 |
| Conread position: | 174-464 |
| Cow position: | chr15:13387152-13387456 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 54, 46 |
| Conread position: | 174-470 |
| Cow position: | chr15:42789072-42788782 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 107, 47 |
| Conread position: | 192-470 |
| Cow position: | chr15:43248683-43248388 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 34, 239 |
| Conread position: | 199-468 |
| Cow position: | chr15:3700188-3699905 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 36, 24 |
| Conread position: | 210-470 |
| Cow position: | chr15:29272299-29272575 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 213-465 |
| Cow position: | chr15:26701965-26701703 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 57, 15 |
| Conread position: | 213-470 |
| Cow position: | chr15:16112513-16112783 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 50, 213 |
| Conread position: | 221-439 |
| Cow position: | chr15:17683147-17683377 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 58, 49 |
Show alignments to all cow chromosomes.