Cow genome map
| Conread name: | rsto236_j17.y1 |
| Conread position: | 1-259 |
| Cow position: | chr17:933673-933409 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 73, 69 |
| Conread position: | 1-404 |
| Cow position: | chr17:28847430-28847852 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 66 |
| Conread position: | 3-151 |
| Cow position: | chr17:25117197-25117052 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 3-162 |
| Cow position: | chr17:8035950-8035791 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-267 |
| Cow position: | chr17:1310024-1310294 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 198 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 161, 232 |
| Conread position: | 3-427 |
| Cow position: | chr17:30329904-30329487 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 112 |
| Conread position: | 3-436 |
| Cow position: | chr17:15450587-15450140 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 25 |
| Conread position: | 3-445 |
| Cow position: | chr17:24609049-24608624 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 297 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 88, 29 |
| Conread position: | 3-470 |
| Cow position: | chr17:4330839-4330388 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 320 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 121, 67 |
| Conread position: | 3-470 |
| Cow position: | chr17:11374465-11374940 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 208 |
| Conread position: | 3-470 |
| Cow position: | chr17:13236471-13236978 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 38 |
| Conread position: | 3-470 |
| Cow position: | chr17:30204903-30204404 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 138 |
| Conread position: | 11-130 |
| Cow position: | chr17:36149328-36149209 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-446 |
| Cow position: | chr17:20208604-20209035 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 19 |
| Conread position: | 14-298 |
| Cow position: | chr17:5219957-5220242 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 159, 59 |
| Conread position: | 26-470 |
| Cow position: | chr17:7252245-7251791 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 110 |
| Conread position: | 35-248 |
| Cow position: | chr17:701603-701388 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 129, 40 |
| Conread position: | 36-403 |
| Cow position: | chr17:14230886-14231266 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 248 |
| Conread position: | 37-446 |
| Cow position: | chr17:24818424-24818027 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 17 |
| Conread position: | 92-354 |
| Cow position: | chr17:12554566-12554830 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 76, 165 |
| Conread position: | 106-462 |
| Cow position: | chr17:20652790-20653138 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 174, 46 |
| Conread position: | 119-415 |
| Cow position: | chr17:18824903-18824595 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 49, 30 |
| Conread position: | 119-437 |
| Cow position: | chr17:15577877-15577547 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 36, 258 |
| Conread position: | 164-470 |
| Cow position: | chr17:1653628-1653939 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 106, 54 |
| Conread position: | 173-430 |
| Cow position: | chr17:38985199-38985442 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 174-374 |
| Cow position: | chr17:7614325-7614527 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 174-410 |
| Cow position: | chr17:12536411-12536658 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 32 |
| Conread position: | 176-384 |
| Cow position: | chr17:37778567-37778781 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 95, 23 |
| Conread position: | 183-470 |
| Cow position: | chr17:25541772-25542063 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 52, 32 |
| Conread position: | 188-469 |
| Cow position: | chr17:27780896-27780607 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 32, 233 |
| Conread position: | 193-430 |
| Cow position: | chr17:5997060-5997305 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 110, 76 |
| Conread position: | 197-434 |
| Cow position: | chr17:37414860-37415114 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 205-384 |
| Cow position: | chr17:37776145-37775957 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 210-470 |
| Cow position: | chr17:25755813-25755533 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 23, 5 |
Show alignments to all cow chromosomes.