Cow genome map
| Conread name: | rsto236_j17.y1 |
| Conread position: | 1-288 |
| Cow position: | chr18:21290845-21291133 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 117 |
| Conread position: | 1-341 |
| Cow position: | chr18:8204689-8204369 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 186, 48 |
| Conread position: | 1-470 |
| Cow position: | chr18:22065201-22065685 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 69 |
| Conread position: | 3-259 |
| Cow position: | chr18:31393746-31393492 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 149, 15 |
| Conread position: | 3-281 |
| Cow position: | chr18:23669105-23669391 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 18, 223 |
| Conread position: | 3-370 |
| Cow position: | chr18:50790444-50790070 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 111, 116 |
| Conread position: | 3-446 |
| Cow position: | chr18:8170337-8169875 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 106 |
| Conread position: | 3-452 |
| Cow position: | chr18:48550137-48549686 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 63 |
| Conread position: | 3-455 |
| Cow position: | chr18:29224852-29224370 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 25 |
| Conread position: | 3-464 |
| Cow position: | chr18:54031860-54031392 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 87 |
| Conread position: | 5-447 |
| Cow position: | chr18:11367599-11368063 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 25 |
| Conread position: | 6-462 |
| Cow position: | chr18:32860808-32860332 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 82 |
| Conread position: | 10-431 |
| Cow position: | chr18:28085723-28085291 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 123 |
| Conread position: | 18-200 |
| Cow position: | chr18:39475116-39475299 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 121, 68 |
| Conread position: | 25-446 |
| Cow position: | chr18:16258994-16258569 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 74 |
| Conread position: | 44-414 |
| Cow position: | chr18:36187426-36187799 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 56, 60 |
| Conread position: | 50-442 |
| Cow position: | chr18:23316998-23317398 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 58 |
| Conread position: | 66-370 |
| Cow position: | chr18:54275625-54275308 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 94, 148 |
| Conread position: | 93-462 |
| Cow position: | chr18:39278929-39279314 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 59, 122 |
| Conread position: | 94-470 |
| Cow position: | chr18:35471861-35472261 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 95-407 |
| Cow position: | chr18:29474535-29474223 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 95-438 |
| Cow position: | chr18:9806487-9806119 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 20, 26 |
| Conread position: | 98-426 |
| Cow position: | chr18:22433867-22434208 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 169 |
| Conread position: | 108-470 |
| Cow position: | chr18:45961218-45961583 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 118-462 |
| Cow position: | chr18:34051947-34052303 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 104 |
| Conread position: | 120-426 |
| Cow position: | chr18:34324913-34325237 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 39, 80 |
| Conread position: | 168-393 |
| Cow position: | chr18:34021375-34021144 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 102, 75 |
| Conread position: | 170-421 |
| Cow position: | chr18:17227981-17228241 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 104, 45 |
| Conread position: | 175-436 |
| Cow position: | chr18:23652641-23652902 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 59, 24 |
| Conread position: | 203-434 |
| Cow position: | chr18:19487068-19486826 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 18, 26 |
| Conread position: | 209-470 |
| Cow position: | chr18:28794122-28794390 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 5 |
| Conread position: | 224-470 |
| Cow position: | chr18:7966186-7965943 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 74, 34 |
Show alignments to all cow chromosomes.