Cow genome map
| Conread name: | rsto236_j17.y1 |
| Conread position: | 1-165 |
| Cow position: | chr20:21403139-21402977 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-445 |
| Cow position: | chr20:31563739-31564192 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 11 |
| Conread position: | 3-231 |
| Cow position: | chr20:4851390-4851158 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 3-249 |
| Cow position: | chr20:23422166-23422411 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 225, 0 |
| Conread position: | 3-465 |
| Cow position: | chr20:27977475-27977955 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 127 |
| Conread position: | 3-470 |
| Cow position: | chr20:17474550-17475020 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 276 |
| Conread position: | 3-470 |
| Cow position: | chr20:17832058-17831597 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 111 |
| Conread position: | 3-470 |
| Cow position: | chr20:22919939-22920409 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 85 |
| Conread position: | 3-471 |
| Cow position: | chr20:32153741-32153255 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 27 |
| Conread position: | 5-222 |
| Cow position: | chr20:24280203-24279978 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 93, 54 |
| Conread position: | 5-450 |
| Cow position: | chr20:20350758-20351215 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 218 |
| Conread position: | 6-356 |
| Cow position: | chr20:16585405-16585763 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 132, 65 |
| Conread position: | 6-407 |
| Cow position: | chr20:25293827-25293409 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 222 |
| Conread position: | 7-356 |
| Cow position: | chr20:26083750-26084109 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 66 |
| Conread position: | 14-387 |
| Cow position: | chr20:2609029-2608658 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 255 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 52, 130 |
| Conread position: | 15-375 |
| Cow position: | chr20:35384957-35384600 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 261 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 206, 32 |
| Conread position: | 16-445 |
| Cow position: | chr20:3427358-3426934 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 8 |
| Conread position: | 23-219 |
| Cow position: | chr20:12121855-12122053 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 23-392 |
| Cow position: | chr20:30327731-30327371 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 145, 46 |
| Conread position: | 23-435 |
| Cow position: | chr20:7539008-7539446 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 200 |
| Conread position: | 26-437 |
| Cow position: | chr20:4359470-4359869 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 109 |
| Conread position: | 27-451 |
| Cow position: | chr20:27843858-27843422 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 383 |
| Conread position: | 33-470 |
| Cow position: | chr20:13821375-13821831 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 196 |
| Conread position: | 36-464 |
| Cow position: | chr20:12809201-12808754 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 128, 254 |
| Conread position: | 42-446 |
| Cow position: | chr20:35897717-35897294 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 188 |
| Conread position: | 42-449 |
| Cow position: | chr20:19238237-19238657 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 31 |
| Conread position: | 87-442 |
| Cow position: | chr20:7803014-7803367 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 7 |
| Conread position: | 119-446 |
| Cow position: | chr20:10759354-10759689 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 37, 111 |
| Conread position: | 153-431 |
| Cow position: | chr20:7600701-7600986 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 66, 26 |
| Conread position: | 160-470 |
| Cow position: | chr20:33363588-33363267 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 228 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 8, 16 |
| Conread position: | 170-413 |
| Cow position: | chr20:9923642-9923406 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 106, 37 |
| Conread position: | 174-453 |
| Cow position: | chr20:28982758-28982467 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 53, 60 |
| Conread position: | 209-470 |
| Cow position: | chr20:24069828-24069566 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 61, 141 |
| Conread position: | 230-468 |
| Cow position: | chr20:12488628-12488871 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 44, 163 |
Show alignments to all cow chromosomes.