Cow genome map
| Conread name: | rsto236_j17.y1 |
| Conread position: | 1-470 |
| Cow position: | chr21:24944638-24945125 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 236 |
| Conread position: | 2-470 |
| Cow position: | chr21:16166387-16166861 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 62 |
| Conread position: | 3-222 |
| Cow position: | chr21:6280546-6280322 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 148, 111 |
| Conread position: | 3-263 |
| Cow position: | chr21:25019118-25018853 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 161, 67 |
| Conread position: | 3-326 |
| Cow position: | chr21:33292971-33292633 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 3-370 |
| Cow position: | chr21:37886661-37886283 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 270 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 51, 116 |
| Conread position: | 3-374 |
| Cow position: | chr21:37355925-37355550 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 125, 25 |
| Conread position: | 3-470 |
| Cow position: | chr21:30897665-30897195 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 97 |
| Conread position: | 5-225 |
| Cow position: | chr21:15543701-15543922 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 163, 81 |
| Conread position: | 6-216 |
| Cow position: | chr21:23399206-23398991 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 147, 185 |
| Conread position: | 6-470 |
| Cow position: | chr21:1991531-1991076 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 64 |
| Conread position: | 7-210 |
| Cow position: | chr21:24972356-24972564 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 146, 126 |
| Conread position: | 7-470 |
| Cow position: | chr21:39766078-39765623 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 81 |
| Conread position: | 10-441 |
| Cow position: | chr21:5597401-5596948 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 106 |
| Conread position: | 14-389 |
| Cow position: | chr21:16982124-16981734 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 63, 40 |
| Conread position: | 16-446 |
| Cow position: | chr21:6618753-6619179 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 193 |
| Conread position: | 21-241 |
| Cow position: | chr21:9041103-9040878 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 140, 110 |
| Conread position: | 30-470 |
| Cow position: | chr21:37941457-37941910 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 61 |
| Conread position: | 34-436 |
| Cow position: | chr21:39075486-39075903 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 49 |
| Conread position: | 50-459 |
| Cow position: | chr21:37282507-37282092 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 13 |
| Conread position: | 92-415 |
| Cow position: | chr21:27344241-27344575 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 77, 131 |
| Conread position: | 101-388 |
| Cow position: | chr21:32903998-32904289 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 19 |
| Conread position: | 101-452 |
| Cow position: | chr21:26614504-26614866 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 52, 121 |
| Conread position: | 103-470 |
| Cow position: | chr21:23786186-23785800 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 52, 17 |
| Conread position: | 119-470 |
| Cow position: | chr21:23499689-23500049 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 114 |
| Conread position: | 168-468 |
| Cow position: | chr21:20575392-20575681 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 255, 34 |
| Conread position: | 169-341 |
| Cow position: | chr21:17672564-17672733 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 113, 59 |
| Conread position: | 171-442 |
| Cow position: | chr21:39069100-39069366 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 60, 35 |
| Conread position: | 171-470 |
| Cow position: | chr21:29943084-29942773 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 52 |
| Conread position: | 174-435 |
| Cow position: | chr21:35997253-35996980 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 56, 32 |
| Conread position: | 174-446 |
| Cow position: | chr21:12801672-12801947 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 58, 41 |
| Conread position: | 174-470 |
| Cow position: | chr21:27229714-27230020 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 97, 275 |
| Conread position: | 195-470 |
| Cow position: | chr21:44331235-44331513 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 13, 20 |
| Conread position: | 224-431 |
| Cow position: | chr21:26645627-26645839 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 7, 18 |
Show alignments to all cow chromosomes.