Cow genome map
| Conread name: | rsto236_j17.y1 |
| Conread position: | 3-162 |
| Cow position: | chr23:15054262-15054101 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-241 |
| Cow position: | chr23:20217068-20216837 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 165, 35 |
| Conread position: | 3-341 |
| Cow position: | chr23:7253277-7252914 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 248 |
| Conread position: | 3-428 |
| Cow position: | chr23:3715946-3715518 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 81 |
| Conread position: | 3-470 |
| Cow position: | chr23:16170901-16170407 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 269 |
| Conread position: | 5-224 |
| Cow position: | chr23:25078993-25079214 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 22, 68 |
| Conread position: | 6-341 |
| Cow position: | chr23:38026629-38026975 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 67, 197 |
| Conread position: | 9-167 |
| Cow position: | chr23:1083307-1083464 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 110, 75 |
| Conread position: | 10-463 |
| Cow position: | chr23:2371546-2371097 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 33 |
| Conread position: | 11-216 |
| Cow position: | chr23:5265330-5265539 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 153, 22 |
| Conread position: | 11-446 |
| Cow position: | chr23:2436151-2436592 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 66 |
| Conread position: | 14-341 |
| Cow position: | chr23:22524334-22524650 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 267, 126 |
| Conread position: | 14-415 |
| Cow position: | chr23:9191927-9192313 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 271 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 124, 38 |
| Conread position: | 14-447 |
| Cow position: | chr23:21631401-21630969 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 217 |
| Conread position: | 19-425 |
| Cow position: | chr23:9546562-9546152 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 117 |
| Conread position: | 22-178 |
| Cow position: | chr23:23916760-23916604 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 113, 145 |
| Conread position: | 23-257 |
| Cow position: | chr23:8737658-8737903 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 91, 96 |
| Conread position: | 28-470 |
| Cow position: | chr23:7751365-7750901 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 87 |
| Conread position: | 36-459 |
| Cow position: | chr23:10414867-10415307 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 37 |
| Conread position: | 38-470 |
| Cow position: | chr23:36687693-36688111 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 295 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 124, 89 |
| Conread position: | 42-470 |
| Cow position: | chr23:25408987-25408548 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 151 |
| Conread position: | 50-426 |
| Cow position: | chr23:7321666-7322042 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 9, 70 |
| Conread position: | 60-358 |
| Cow position: | chr23:10844759-10845064 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 59, 55 |
| Conread position: | 75-430 |
| Cow position: | chr23:9725124-9725477 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 263 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 77, 16 |
| Conread position: | 108-470 |
| Cow position: | chr23:20753095-20752723 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 264 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 118, 13 |
| Conread position: | 118-434 |
| Cow position: | chr23:791953-792285 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 43, 99 |
| Conread position: | 119-434 |
| Cow position: | chr23:37223995-37224319 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 97, 77 |
| Conread position: | 119-451 |
| Cow position: | chr23:31607076-31607430 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 81 |
| Conread position: | 121-414 |
| Cow position: | chr23:7063440-7063739 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 43, 72 |
| Conread position: | 153-470 |
| Cow position: | chr23:16609769-16610100 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 74 |
| Conread position: | 168-452 |
| Cow position: | chr23:645350-645060 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 103, 61 |
| Conread position: | 194-470 |
| Cow position: | chr23:15038164-15038433 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 142, 50 |
| Conread position: | 199-470 |
| Cow position: | chr23:11473515-11473797 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 81, 72 |
| Conread position: | 207-451 |
| Cow position: | chr23:12408521-12408781 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 8, 174 |
| Conread position: | 228-436 |
| Cow position: | chr23:25531484-25531699 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 179 |
Show alignments to all cow chromosomes.