Cow genome map
| Conread name: | rsto236_j17.y1 |
| Conread position: | 1-126 |
| Cow position: | chr24:31301490-31301616 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 115 |
| Conread position: | 1-269 |
| Cow position: | chr24:19644838-19644566 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 79, 71 |
| Conread position: | 1-431 |
| Cow position: | chr24:38001585-38002018 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 48 |
| Conread position: | 1-470 |
| Cow position: | chr24:37480163-37480618 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 327 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 135, 69 |
| Conread position: | 3-199 |
| Cow position: | chr24:43492341-43492539 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 165, 74 |
| Conread position: | 3-209 |
| Cow position: | chr24:19961351-19961555 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 135, 69 |
| Conread position: | 3-235 |
| Cow position: | chr24:36853489-36853255 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 150, 72 |
| Conread position: | 3-269 |
| Cow position: | chr24:19627497-19627225 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 161, 233 |
| Conread position: | 3-301 |
| Cow position: | chr24:41405154-41405450 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 150, 30 |
| Conread position: | 3-407 |
| Cow position: | chr24:30695540-30695951 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 152, 53 |
| Conread position: | 3-446 |
| Cow position: | chr24:39607415-39607845 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 306 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 90, 111 |
| Conread position: | 3-469 |
| Cow position: | chr24:26846092-26846593 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 84 |
| Conread position: | 4-236 |
| Cow position: | chr24:6665276-6665516 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 4-469 |
| Cow position: | chr24:38643786-38643321 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 5-247 |
| Cow position: | chr24:42817425-42817178 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 159, 229 |
| Conread position: | 5-444 |
| Cow position: | chr24:17763099-17763540 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 44 |
| Conread position: | 6-232 |
| Cow position: | chr24:43350933-43351165 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 160, 215 |
| Conread position: | 6-436 |
| Cow position: | chr24:25246199-25245768 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 71 |
| Conread position: | 6-446 |
| Cow position: | chr24:37386187-37386631 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 67 |
| Conread position: | 7-137 |
| Cow position: | chr24:6423893-6424020 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 9-326 |
| Cow position: | chr24:6177561-6177234 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 225 |
| Conread position: | 11-414 |
| Cow position: | chr24:14913407-14913792 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 54 |
| Conread position: | 14-269 |
| Cow position: | chr24:28440748-28440487 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 149, 214 |
| Conread position: | 23-468 |
| Cow position: | chr24:28067887-28067452 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 135, 54 |
| Conread position: | 32-415 |
| Cow position: | chr24:15474082-15473700 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 86 |
| Conread position: | 50-465 |
| Cow position: | chr24:35836127-35836546 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 70 |
| Conread position: | 74-341 |
| Cow position: | chr24:12572625-12572344 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 87, 152 |
| Conread position: | 96-437 |
| Cow position: | chr24:25228990-25229339 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 25 |
| Conread position: | 119-363 |
| Cow position: | chr24:18786869-18787127 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 51, 83 |
| Conread position: | 168-428 |
| Cow position: | chr24:16476401-16476134 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 168-444 |
| Cow position: | chr24:28028713-28028994 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 64, 16 |
| Conread position: | 174-446 |
| Cow position: | chr24:6061408-6061682 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 191-452 |
| Cow position: | chr24:18076122-18075852 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 197-470 |
| Cow position: | chr24:43733942-43733654 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 212 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 205-452 |
| Cow position: | chr24:16556678-16556928 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 30, 8 |
| Conread position: | 206-439 |
| Cow position: | chr24:14746594-14746353 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 17 |
Show alignments to all cow chromosomes.