Cow genome map
| Conread name: | rsto236_j17.y1 |
| Conread position: | 3-209 |
| Cow position: | chr27:11935470-11935662 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 3-301 |
| Cow position: | chr27:5530517-5530819 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 137, 57 |
| Conread position: | 3-360 |
| Cow position: | chr27:3934918-3934556 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 124 |
| Conread position: | 3-431 |
| Cow position: | chr27:30889127-30888692 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 85 |
| Conread position: | 3-470 |
| Cow position: | chr27:27738161-27737685 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 322 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 151, 47 |
| Conread position: | 5-432 |
| Cow position: | chr27:1142268-1141826 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 300 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 19, 95 |
| Conread position: | 10-248 |
| Cow position: | chr27:31238185-31237940 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 54, 219 |
| Conread position: | 10-298 |
| Cow position: | chr27:9261602-9261896 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 78, 226 |
| Conread position: | 14-213 |
| Cow position: | chr27:9184397-9184606 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 118, 29 |
| Conread position: | 16-465 |
| Cow position: | chr27:9371296-9371743 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 31 |
| Conread position: | 23-457 |
| Cow position: | chr27:1997944-1998371 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 114 |
| Conread position: | 25-446 |
| Cow position: | chr27:25676017-25676458 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 116 |
| Conread position: | 26-378 |
| Cow position: | chr27:4007468-4007090 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 135, 88 |
| Conread position: | 42-263 |
| Cow position: | chr27:15865745-15865953 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 101-400 |
| Cow position: | chr27:156558-156257 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 63, 132 |
| Conread position: | 103-301 |
| Cow position: | chr27:11356672-11356471 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 110-443 |
| Cow position: | chr27:20766083-20765743 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 118-435 |
| Cow position: | chr27:17924408-17924097 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 37, 96 |
| Conread position: | 168-465 |
| Cow position: | chr27:26653245-26653548 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 97, 41 |
| Conread position: | 169-385 |
| Cow position: | chr27:12244188-12243973 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 120, 56 |
| Conread position: | 174-470 |
| Cow position: | chr27:22171240-22171547 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 176-430 |
| Cow position: | chr27:1498260-1498521 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 95, 39 |
| Conread position: | 176-465 |
| Cow position: | chr27:4672961-4673262 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 43, 58 |
| Conread position: | 200-438 |
| Cow position: | chr27:19637606-19637849 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 201 |
| Conread position: | 201-468 |
| Cow position: | chr27:13860769-13860499 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 211 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 13, 73 |
| Conread position: | 203-447 |
| Cow position: | chr27:15200669-15200921 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 28, 209 |
| Conread position: | 207-415 |
| Cow position: | chr27:24224919-24224715 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 24, 16 |
| Conread position: | 215-465 |
| Cow position: | chr27:26299817-26300078 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 55, 240 |
Show alignments to all cow chromosomes.