Cow genome map
| Conread name: | rsto236_j17.y1 |
| Conread position: | 1-415 |
| Cow position: | chr29:17339115-17339534 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 58 |
| Conread position: | 1-470 |
| Cow position: | chr29:18338352-18338838 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 108 |
| Conread position: | 3-427 |
| Cow position: | chr29:16359812-16359364 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 378 |
| Conread position: | 3-442 |
| Cow position: | chr29:2481152-2481589 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 27 |
| Conread position: | 3-446 |
| Cow position: | chr29:17966151-17965689 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 55, 30 |
| Conread position: | 3-447 |
| Cow position: | chr29:42268886-42268422 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 43 |
| Conread position: | 3-465 |
| Cow position: | chr29:134362-133902 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 27 |
| Conread position: | 3-470 |
| Cow position: | chr29:10224863-10225319 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 113, 144 |
| Conread position: | 3-470 |
| Cow position: | chr29:19931519-19931062 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 117 |
| Conread position: | 5-219 |
| Cow position: | chr29:30921502-30921714 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 5-301 |
| Cow position: | chr29:13040351-13040650 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 110, 94 |
| Conread position: | 5-341 |
| Cow position: | chr29:9513048-9512714 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 110, 20 |
| Conread position: | 5-394 |
| Cow position: | chr29:8906717-8906304 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 21 |
| Conread position: | 6-227 |
| Cow position: | chr29:37207948-37207721 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 155, 92 |
| Conread position: | 6-439 |
| Cow position: | chr29:18880232-18880647 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 286 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 144, 211 |
| Conread position: | 7-411 |
| Cow position: | chr29:22454643-22455027 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 285 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 308, 18 |
| Conread position: | 10-447 |
| Cow position: | chr29:6472491-6472048 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 27, 199 |
| Conread position: | 23-306 |
| Cow position: | chr29:798226-798514 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 116, 206 |
| Conread position: | 23-459 |
| Cow position: | chr29:1576074-1576517 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 292 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 68, 50 |
| Conread position: | 26-402 |
| Cow position: | chr29:14034165-14034551 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 262 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 118, 68 |
| Conread position: | 29-335 |
| Cow position: | chr29:35036891-35036579 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 28, 20 |
| Conread position: | 52-419 |
| Cow position: | chr29:31489002-31488626 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 11 |
| Conread position: | 62-446 |
| Cow position: | chr29:30812876-30812482 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 17 |
| Conread position: | 81-440 |
| Cow position: | chr29:23348091-23348455 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 43 |
| Conread position: | 81-452 |
| Cow position: | chr29:478219-477833 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 350 |
| Conread position: | 101-442 |
| Cow position: | chr29:43963441-43963785 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 54 |
| Conread position: | 108-429 |
| Cow position: | chr29:11787879-11787541 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 51, 12 |
| Conread position: | 115-470 |
| Cow position: | chr29:38246664-38247038 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 106 |
| Conread position: | 120-462 |
| Cow position: | chr29:19509019-19508661 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 261 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 134-446 |
| Cow position: | chr29:23742999-23743305 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 90, 42 |
| Conread position: | 174-429 |
| Cow position: | chr29:30544857-30545113 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 109, 29 |
| Conread position: | 176-431 |
| Cow position: | chr29:13554150-13553879 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 206 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 48, 21 |
| Conread position: | 176-470 |
| Cow position: | chr29:1956082-1956384 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 153, 17 |
| Conread position: | 183-446 |
| Cow position: | chr29:9938077-9938335 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 191-460 |
| Cow position: | chr29:19601358-19601621 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 141, 24 |
| Conread position: | 223-464 |
| Cow position: | chr29:7407923-7408176 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 59, 5 |
| Conread position: | 238-470 |
| Cow position: | chr29:16612007-16612245 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 81, 88 |
Show alignments to all cow chromosomes.