Cow genome map


           Conread name:
           rsto236_j17.y1
        

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               146, 23
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               311
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               17, 118
               

               Conread position:
               1-445
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               313
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               51, 70
               

               Conread position:
               1-452
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 62
               

               Conread position:
               1-465
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 37
               

               Conread position:
               1-468
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 113
               

               Conread position:
               2-447
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 98
               

               Conread position:
               3-151
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-151
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               139, 70
               

               Conread position:
               3-151
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               110, 60
               

               Conread position:
               3-206
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               3-317
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 67
               

               Conread position:
               3-378
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 233
               

               Conread position:
               3-405
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               275
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               93, 74
               

               Conread position:
               3-429
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 80
               

               Conread position:
               3-438
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 64
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 22
               

               Conread position:
               3-470
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 85
               

               Conread position:
               3-470
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 68
               

               Conread position:
               4-162
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               5-136
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               5-433
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               281
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               148, 75
               

               Conread position:
               5-470
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 228
               

               Conread position:
               6-387
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 128
               

               Conread position:
               6-451
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 122
               

               Conread position:
               6-469
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 107
               

               Conread position:
               6-470
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 23
               

               Conread position:
               10-341
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               105, 86
               

               Conread position:
               11-451
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               304
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               152, 63
               

               Conread position:
               12-255
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               230, 20
               

               Conread position:
               14-268
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 208
               

               Conread position:
               14-325
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               147, 49
               

               Conread position:
               14-434
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 35
               

               Conread position:
               14-444
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               165, 45
               

               Conread position:
               14-465
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 49
               

               Conread position:
               14-466
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 221
               

               Conread position:
               15-340
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               146, 40
               

               Conread position:
               16-364
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               244
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               42, 116
               

               Conread position:
               20-445
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               308
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               133, 57
               

               Conread position:
               23-446
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 96
               

               Conread position:
               23-470
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 26
               

               Conread position:
               26-298
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               129, 44
               

               Conread position:
               30-377
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 15
               

               Conread position:
               42-446
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 149
               

               Conread position:
               72-438
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 150
               

               Conread position:
               97-446
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 11
               

               Conread position:
               100-301
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               64, 128
               

               Conread position:
               101-465
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 117
               

               Conread position:
               102-301
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               102-470
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 48
               

               Conread position:
               104-451
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               255
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               126, 95
               

               Conread position:
               108-435
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               61, 12
               

               Conread position:
               119-470
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               36, 111
               

               Conread position:
               119-470
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               242
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               40, 124
               

               Conread position:
               168-417
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               174-431
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               168, 41
               

               Conread position:
               174-470
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               59, 50
               

               Conread position:
               192-470
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               192-471
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               23, 31
               

               Conread position:
               203-440
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               14, 65
               

               Conread position:
               214-470
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               217-452
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               54, 123
               

               Conread position:
               229-444
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               20, 14
               
Show alignments to all cow chromosomes.