Cow genome map


           Conread name:
           rsto236_j17.y1
        

               Conread position:
               1-406
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               150, 213
               

               Conread position:
               1-442
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               309
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               148, 47
               

               Conread position:
               1-462
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 199
               

               Conread position:
               1-470
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 97
               

               Conread position:
               1-472
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               315
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               287, 41
               

               Conread position:
               2-428
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 6
               

               Conread position:
               3-123
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               3-200
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               150, 67
               

               Conread position:
               3-269
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               165, 70
               

               Conread position:
               3-358
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               252
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               135, 27
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 38
               

               Conread position:
               3-387
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 70
               

               Conread position:
               3-404
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 224
               

               Conread position:
               3-430
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 277
               

               Conread position:
               3-432
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               161, 13
               

               Conread position:
               3-435
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 82
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 68
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               295
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               226, 163
               

               Conread position:
               3-447
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 226
               

               Conread position:
               3-470
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 104
               

               Conread position:
               3-470
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 179
               

               Conread position:
               4-311
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 75
               

               Conread position:
               4-459
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 29
               

               Conread position:
               6-470
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 39
               

               Conread position:
               9-470
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 63
               

               Conread position:
               10-356
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               261, 105
               

               Conread position:
               10-470
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               314
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               89, 76
               

               Conread position:
               10-470
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               323
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               108, 65
               

               Conread position:
               11-327
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 275
               

               Conread position:
               14-213
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               113, 201
               

               Conread position:
               14-442
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 215
               

               Conread position:
               14-446
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               299
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               147, 60
               

               Conread position:
               14-461
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               134, 90
               

               Conread position:
               14-463
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 49
               

               Conread position:
               14-464
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 191
               

               Conread position:
               14-471
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 110
               

               Conread position:
               18-465
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               329
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               132, 82
               

               Conread position:
               22-269
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               59, 78
               

               Conread position:
               41-315
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               42, 103
               

               Conread position:
               41-470
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 36
               

               Conread position:
               46-444
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               278
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               115, 32
               

               Conread position:
               101-470
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 128
               

               Conread position:
               102-470
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 18
               

               Conread position:
               102-470
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               270
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               51, 80
               

               Conread position:
               108-442
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               65, 13
               

               Conread position:
               118-387
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 91
               

               Conread position:
               118-425
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               22, 97
               

               Conread position:
               119-449
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               236
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               49, 62
               

               Conread position:
               153-341
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               61, 77
               

               Conread position:
               168-470
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               168, 51
               

               Conread position:
               172-436
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               59, 51
               

               Conread position:
               174-446
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               96, 23
               

               Conread position:
               174-470
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               61, 57
               

               Conread position:
               174-470
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               45, 60
               

               Conread position:
               190-468
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               96, 8
               

               Conread position:
               194-443
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               13, 30
               

               Conread position:
               195-470
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               199-438
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               72, 20
               

               Conread position:
               208-468
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               15, 196
               

               Conread position:
               210-418
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               23, 61
               

               Conread position:
               210-435
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               18, 0
               
Show alignments to all cow chromosomes.