Cow genome map
| Conread name: | rsto236_j17.y1 |
| Conread position: | 1-406 |
| Cow position: | chr7:22880508-22880088 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 150, 213 |
| Conread position: | 1-442 |
| Cow position: | chr7:19262928-19263371 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 309 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 148, 47 |
| Conread position: | 1-462 |
| Cow position: | chr7:43004616-43004148 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 199 |
| Conread position: | 1-470 |
| Cow position: | chr7:20104787-20105269 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 97 |
| Conread position: | 1-472 |
| Cow position: | chr7:65848842-65849306 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 315 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 287, 41 |
| Conread position: | 2-428 |
| Cow position: | chr7:61425783-61425357 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 6 |
| Conread position: | 3-123 |
| Cow position: | chr7:2967361-2967242 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 3-200 |
| Cow position: | chr7:61754819-61754621 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 150, 67 |
| Conread position: | 3-269 |
| Cow position: | chr7:11187450-11187179 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 165, 70 |
| Conread position: | 3-358 |
| Cow position: | chr7:63328306-63327958 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 252 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 135, 27 |
| Conread position: | 3-384 |
| Cow position: | chr7:66335535-66335921 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 38 |
| Conread position: | 3-387 |
| Cow position: | chr7:62516238-62515841 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 70 |
| Conread position: | 3-404 |
| Cow position: | chr7:35171340-35171749 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 224 |
| Conread position: | 3-430 |
| Cow position: | chr7:48335239-48335680 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 277 |
| Conread position: | 3-432 |
| Cow position: | chr7:65953172-65953595 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 161, 13 |
| Conread position: | 3-435 |
| Cow position: | chr7:67498927-67498491 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 82 |
| Conread position: | 3-446 |
| Cow position: | chr7:34163010-34162565 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 68 |
| Conread position: | 3-446 |
| Cow position: | chr7:48763569-48763132 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 295 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 226, 163 |
| Conread position: | 3-447 |
| Cow position: | chr7:34670355-34669897 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 226 |
| Conread position: | 3-470 |
| Cow position: | chr7:23446694-23447153 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 104 |
| Conread position: | 3-470 |
| Cow position: | chr7:35754692-35754214 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 179 |
| Conread position: | 4-311 |
| Cow position: | chr7:13823012-13822692 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 75 |
| Conread position: | 4-459 |
| Cow position: | chr7:39512374-39512838 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 29 |
| Conread position: | 6-470 |
| Cow position: | chr7:63547792-63548268 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 39 |
| Conread position: | 9-470 |
| Cow position: | chr7:28671796-28672258 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 63 |
| Conread position: | 10-356 |
| Cow position: | chr7:29377928-29378274 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 261, 105 |
| Conread position: | 10-470 |
| Cow position: | chr7:14399728-14400171 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 314 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 89, 76 |
| Conread position: | 10-470 |
| Cow position: | chr7:27709440-27709916 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 323 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 108, 65 |
| Conread position: | 11-327 |
| Cow position: | chr7:1398059-1398380 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 275 |
| Conread position: | 14-213 |
| Cow position: | chr7:1608359-1608568 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 113, 201 |
| Conread position: | 14-442 |
| Cow position: | chr7:37025050-37024629 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 215 |
| Conread position: | 14-446 |
| Cow position: | chr7:25223810-25223377 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 299 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 147, 60 |
| Conread position: | 14-461 |
| Cow position: | chr7:37419429-37418998 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 134, 90 |
| Conread position: | 14-463 |
| Cow position: | chr7:54855795-54855326 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 49 |
| Conread position: | 14-464 |
| Cow position: | chr7:42222215-42222673 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 191 |
| Conread position: | 14-471 |
| Cow position: | chr7:52130729-52130249 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 110 |
| Conread position: | 18-465 |
| Cow position: | chr7:27763192-27762720 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 329 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 132, 82 |
| Conread position: | 22-269 |
| Cow position: | chr7:32724486-32724242 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 78 |
| Conread position: | 41-315 |
| Cow position: | chr7:3732179-3731906 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 42, 103 |
| Conread position: | 41-470 |
| Cow position: | chr7:37367175-37366758 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 36 |
| Conread position: | 46-444 |
| Cow position: | chr7:11593023-11593412 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 278 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 115, 32 |
| Conread position: | 101-470 |
| Cow position: | chr7:56098742-56098364 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 128 |
| Conread position: | 102-470 |
| Cow position: | chr7:19399543-19399923 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 102-470 |
| Cow position: | chr7:61460834-61461201 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 270 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 51, 80 |
| Conread position: | 108-442 |
| Cow position: | chr7:7507678-7507341 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 65, 13 |
| Conread position: | 118-387 |
| Cow position: | chr7:56682637-56682907 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 91 |
| Conread position: | 118-425 |
| Cow position: | chr7:23462410-23462710 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 119-449 |
| Cow position: | chr7:53985880-53986210 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 49, 62 |
| Conread position: | 153-341 |
| Cow position: | chr7:60761440-60761246 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 61, 77 |
| Conread position: | 168-470 |
| Cow position: | chr7:22632239-22632533 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 168, 51 |
| Conread position: | 172-436 |
| Cow position: | chr7:7106725-7106997 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 51 |
| Conread position: | 174-446 |
| Cow position: | chr7:24767174-24767447 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 96, 23 |
| Conread position: | 174-470 |
| Cow position: | chr7:32819874-32819562 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 61, 57 |
| Conread position: | 174-470 |
| Cow position: | chr7:35275022-35275318 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 190-468 |
| Cow position: | chr7:40916627-40916339 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 96, 8 |
| Conread position: | 194-443 |
| Cow position: | chr7:40213394-40213133 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 195-470 |
| Cow position: | chr7:32478628-32478336 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 199-438 |
| Cow position: | chr7:51319831-51319583 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 72, 20 |
| Conread position: | 208-468 |
| Cow position: | chr7:68868135-68867861 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 15, 196 |
| Conread position: | 210-418 |
| Cow position: | chr7:29655884-29656091 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 23, 61 |
| Conread position: | 210-435 |
| Cow position: | chr7:59245988-59245749 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.