Cow genome map
| Conread name: | rsto236_j17.y1 |
| Conread position: | 1-205 |
| Cow position: | chr8:59137699-59137905 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 1-287 |
| Cow position: | chr8:19369289-19369567 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 167, 98 |
| Conread position: | 1-431 |
| Cow position: | chr8:27369289-27368862 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 165 |
| Conread position: | 2-302 |
| Cow position: | chr8:33437991-33437688 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 74, 68 |
| Conread position: | 2-470 |
| Cow position: | chr8:49384768-49384317 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 84 |
| Conread position: | 3-205 |
| Cow position: | chr8:21119075-21119282 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 150, 124 |
| Conread position: | 3-258 |
| Cow position: | chr8:31886929-31886683 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 155, 25 |
| Conread position: | 3-352 |
| Cow position: | chr8:32326863-32326511 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 163, 83 |
| Conread position: | 3-449 |
| Cow position: | chr8:11792402-11791961 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 315 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 73, 228 |
| Conread position: | 3-469 |
| Cow position: | chr8:4336872-4337328 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 97 |
| Conread position: | 3-470 |
| Cow position: | chr8:40432669-40433112 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 31 |
| Conread position: | 3-470 |
| Cow position: | chr8:61097840-61098325 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 238 |
| Conread position: | 5-446 |
| Cow position: | chr8:7104220-7104659 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 28 |
| Conread position: | 6-224 |
| Cow position: | chr8:23440931-23441159 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 217 |
| Conread position: | 6-421 |
| Cow position: | chr8:2974847-2974411 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 149 |
| Conread position: | 6-468 |
| Cow position: | chr8:21078726-21078258 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 108 |
| Conread position: | 7-327 |
| Cow position: | chr8:54158929-54158598 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 222 |
| Conread position: | 7-434 |
| Cow position: | chr8:51877743-51878173 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 23 |
| Conread position: | 10-431 |
| Cow position: | chr8:8480752-8481187 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 13 |
| Conread position: | 10-440 |
| Cow position: | chr8:12660568-12660997 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 68 |
| Conread position: | 10-442 |
| Cow position: | chr8:32720158-32719730 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 60 |
| Conread position: | 12-430 |
| Cow position: | chr8:931982-931565 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 158, 315 |
| Conread position: | 12-470 |
| Cow position: | chr8:42649024-42649474 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 309 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 48, 59 |
| Conread position: | 14-359 |
| Cow position: | chr8:41719603-41719939 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 154, 58 |
| Conread position: | 14-470 |
| Cow position: | chr8:22103014-22103465 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 58 |
| Conread position: | 15-162 |
| Cow position: | chr8:19772683-19772538 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 16-351 |
| Cow position: | chr8:30021740-30022079 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 145, 54 |
| Conread position: | 16-379 |
| Cow position: | chr8:25847809-25847426 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 269 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 99, 105 |
| Conread position: | 23-470 |
| Cow position: | chr8:41951778-41951343 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 208 |
| Conread position: | 26-466 |
| Cow position: | chr8:12790669-12791088 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 65 |
| Conread position: | 26-470 |
| Cow position: | chr8:58857835-58857386 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 98 |
| Conread position: | 36-306 |
| Cow position: | chr8:48682328-48682603 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 125, 159 |
| Conread position: | 37-315 |
| Cow position: | chr8:19301360-19301068 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 82, 199 |
| Conread position: | 37-317 |
| Cow position: | chr8:37482268-37482554 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 27, 102 |
| Conread position: | 47-451 |
| Cow position: | chr8:60688080-60688476 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 26, 76 |
| Conread position: | 54-444 |
| Cow position: | chr8:24517296-24517682 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 101 |
| Conread position: | 97-426 |
| Cow position: | chr8:30136023-30135679 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 76, 23 |
| Conread position: | 108-393 |
| Cow position: | chr8:28221470-28221771 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 63, 13 |
| Conread position: | 120-339 |
| Cow position: | chr8:6409491-6409719 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 102 |
| Conread position: | 174-436 |
| Cow position: | chr8:13975919-13975652 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 55, 25 |
| Conread position: | 174-437 |
| Cow position: | chr8:20673756-20674024 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 44, 22 |
| Conread position: | 174-447 |
| Cow position: | chr8:33287188-33286912 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 174-465 |
| Cow position: | chr8:51579289-51578985 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 37 |
| Conread position: | 174-470 |
| Cow position: | chr8:39936538-39936221 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 232 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 179-416 |
| Cow position: | chr8:52195941-52195693 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 42, 23 |
| Conread position: | 190-438 |
| Cow position: | chr8:3645140-3645390 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 77 |
| Conread position: | 199-439 |
| Cow position: | chr8:34478119-34477865 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 71, 29 |
Show alignments to all cow chromosomes.