Cow genome map
Conread name: | rsto236_j17.y1 |
Conread position: | 1-296 |
Cow position: | chr9:25997423-25997718 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 195 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 160, 221 |
Conread position: | 1-446 |
Cow position: | chr9:24850091-24850539 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 47 |
Conread position: | 1-446 |
Cow position: | chr9:55364734-55365185 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 301 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 150, 87 |
Conread position: | 3-162 |
Cow position: | chr9:4834828-4834986 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 119 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 3-224 |
Cow position: | chr9:22977016-22976794 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 162 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 155, 25 |
Conread position: | 3-224 |
Cow position: | chr9:44944266-44944042 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 153 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 165, 128 |
Conread position: | 3-252 |
Cow position: | chr9:18570547-18570299 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 175 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 215, 163 |
Conread position: | 3-257 |
Cow position: | chr9:51269707-51269969 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 192 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 149, 198 |
Conread position: | 3-298 |
Cow position: | chr9:31091667-31091955 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 202 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 95, 84 |
Conread position: | 3-408 |
Cow position: | chr9:13845587-13845993 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 63 |
Conread position: | 3-424 |
Cow position: | chr9:19080138-19079736 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 290 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 137, 37 |
Conread position: | 3-442 |
Cow position: | chr9:12183587-12184038 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 75 |
Conread position: | 3-444 |
Cow position: | chr9:5485709-5486148 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 310 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 152, 72 |
Conread position: | 3-452 |
Cow position: | chr9:41318128-41317663 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 104 |
Conread position: | 3-470 |
Cow position: | chr9:55650874-55651345 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 178 |
Conread position: | 4-210 |
Cow position: | chr9:12181812-12182021 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 152 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 157, 94 |
Conread position: | 5-218 |
Cow position: | chr9:14732175-14732399 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 163 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 108, 96 |
Conread position: | 5-447 |
Cow position: | chr9:44407880-44408329 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 21 |
Conread position: | 5-451 |
Cow position: | chr9:10761504-10761049 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 119 |
Conread position: | 6-451 |
Cow position: | chr9:1281258-1280794 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 184 |
Conread position: | 6-470 |
Cow position: | chr9:11829848-11830329 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 113 |
Conread position: | 7-212 |
Cow position: | chr9:59114220-59114431 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 147 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 31, 128 |
Conread position: | 7-470 |
Cow position: | chr9:5622177-5621710 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 88 |
Conread position: | 10-431 |
Cow position: | chr9:14853609-14853173 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 302 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 130, 33 |
Conread position: | 10-441 |
Cow position: | chr9:62132339-62131887 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 303 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 79, 75 |
Conread position: | 12-436 |
Cow position: | chr9:6739410-6738965 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 302 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 78, 12 |
Conread position: | 13-415 |
Cow position: | chr9:25502683-25502273 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 153 |
Conread position: | 14-464 |
Cow position: | chr9:59530437-59530001 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 281 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 184, 122 |
Conread position: | 16-447 |
Cow position: | chr9:34763000-34762556 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 212 |
Conread position: | 23-470 |
Cow position: | chr9:2223915-2223467 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 98 |
Conread position: | 26-261 |
Cow position: | chr9:12547165-12547403 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 166 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 109, 89 |
Conread position: | 28-452 |
Cow position: | chr9:26099234-26099640 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 293 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 203, 45 |
Conread position: | 30-459 |
Cow position: | chr9:25779217-25779646 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 66 |
Conread position: | 31-258 |
Cow position: | chr9:26191246-26191017 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 165 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 27, 52 |
Conread position: | 31-341 |
Cow position: | chr9:9635228-9634915 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 218 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 130, 211 |
Conread position: | 35-452 |
Cow position: | chr9:10320202-10319785 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 289 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 47, 123 |
Conread position: | 42-225 |
Cow position: | chr9:24953790-24953601 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 133 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 44-306 |
Cow position: | chr9:46657591-46657317 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 196 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 39, 172 |
Conread position: | 44-470 |
Cow position: | chr9:5140951-5141394 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 75 |
Conread position: | 75-312 |
Cow position: | chr9:8406310-8406072 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 177 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 94, 42 |
Conread position: | 75-435 |
Cow position: | chr9:5053324-5052955 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 246 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 14, 19 |
Conread position: | 92-341 |
Cow position: | chr9:2637447-2637190 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 179 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 74, 141 |
Conread position: | 92-449 |
Cow position: | chr9:2634248-2633865 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 260 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 72, 141 |
Conread position: | 99-470 |
Cow position: | chr9:52725283-52724897 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 141 |
Conread position: | 101-470 |
Cow position: | chr9:2034113-2034489 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 267 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 20, 11 |
Conread position: | 122-447 |
Cow position: | chr9:27310797-27310456 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 242 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 39, 20 |
Conread position: | 145-314 |
Cow position: | chr9:43075323-43075491 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 123 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 25, 10 |
Conread position: | 153-426 |
Cow position: | chr9:16745667-16745953 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 241 |
Conread position: | 153-452 |
Cow position: | chr9:60459179-60459476 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 213 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 112, 73 |
Conread position: | 153-470 |
Cow position: | chr9:49271343-49271029 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 229 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 189, 38 |
Conread position: | 164-468 |
Cow position: | chr9:14960953-14961267 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 223 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 71, 58 |
Conread position: | 168-414 |
Cow position: | chr9:38193019-38193265 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 183 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 62, 72 |
Conread position: | 169-412 |
Cow position: | chr9:8779230-8778974 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 194 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 52, 60 |
Conread position: | 169-444 |
Cow position: | chr9:38692524-38692244 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 210 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 98, 38 |
Conread position: | 170-444 |
Cow position: | chr9:2597671-2597388 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 194 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 108, 45 |
Conread position: | 172-447 |
Cow position: | chr9:8950918-8951199 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 25 |
Conread position: | 174-418 |
Cow position: | chr9:34286815-34287062 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 178 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 60, 43 |
Conread position: | 174-470 |
Cow position: | chr9:9200708-9200400 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 227 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 95, 19 |
Conread position: | 185-412 |
Cow position: | chr9:847889-847657 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 164 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 33, 48 |
Conread position: | 188-470 |
Cow position: | chr9:32395972-32396269 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 217 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 82, 31 |
Conread position: | 190-438 |
Cow position: | chr9:33847044-33846787 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 184 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 84, 22 |
Conread position: | 205-461 |
Cow position: | chr9:36490848-36490583 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 180 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.