Cow genome map

Conread name: rsto236_j17.y1

Conread position: 1-296
Cow position: chr9:25997423-25997718 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 195
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 160, 221

Conread position: 1-446
Cow position: chr9:24850091-24850539 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 47

Conread position: 1-446
Cow position: chr9:55364734-55365185 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 301
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 150, 87

Conread position: 3-162
Cow position: chr9:4834828-4834986 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 3-224
Cow position: chr9:22977016-22976794 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 155, 25

Conread position: 3-224
Cow position: chr9:44944266-44944042 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 165, 128

Conread position: 3-252
Cow position: chr9:18570547-18570299 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 215, 163

Conread position: 3-257
Cow position: chr9:51269707-51269969 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 149, 198

Conread position: 3-298
Cow position: chr9:31091667-31091955 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 202
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 95, 84

Conread position: 3-408
Cow position: chr9:13845587-13845993 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 63

Conread position: 3-424
Cow position: chr9:19080138-19079736 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 290
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 137, 37

Conread position: 3-442
Cow position: chr9:12183587-12184038 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 75

Conread position: 3-444
Cow position: chr9:5485709-5486148 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 310
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 152, 72

Conread position: 3-452
Cow position: chr9:41318128-41317663 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 104

Conread position: 3-470
Cow position: chr9:55650874-55651345 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 178

Conread position: 4-210
Cow position: chr9:12181812-12182021 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 157, 94

Conread position: 5-218
Cow position: chr9:14732175-14732399 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 108, 96

Conread position: 5-447
Cow position: chr9:44407880-44408329 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 21

Conread position: 5-451
Cow position: chr9:10761504-10761049 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 119

Conread position: 6-451
Cow position: chr9:1281258-1280794 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 184

Conread position: 6-470
Cow position: chr9:11829848-11830329 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 113

Conread position: 7-212
Cow position: chr9:59114220-59114431 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 128

Conread position: 7-470
Cow position: chr9:5622177-5621710 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 88

Conread position: 10-431
Cow position: chr9:14853609-14853173 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 302
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 130, 33

Conread position: 10-441
Cow position: chr9:62132339-62131887 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 303
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 79, 75

Conread position: 12-436
Cow position: chr9:6739410-6738965 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 302
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 78, 12

Conread position: 13-415
Cow position: chr9:25502683-25502273 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 153

Conread position: 14-464
Cow position: chr9:59530437-59530001 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 281
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 184, 122

Conread position: 16-447
Cow position: chr9:34763000-34762556 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 212

Conread position: 23-470
Cow position: chr9:2223915-2223467 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 98

Conread position: 26-261
Cow position: chr9:12547165-12547403 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 109, 89

Conread position: 28-452
Cow position: chr9:26099234-26099640 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 293
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 203, 45

Conread position: 30-459
Cow position: chr9:25779217-25779646 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 66

Conread position: 31-258
Cow position: chr9:26191246-26191017 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 52

Conread position: 31-341
Cow position: chr9:9635228-9634915 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 130, 211

Conread position: 35-452
Cow position: chr9:10320202-10319785 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 289
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 47, 123

Conread position: 42-225
Cow position: chr9:24953790-24953601 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 44-306
Cow position: chr9:46657591-46657317 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 172

Conread position: 44-470
Cow position: chr9:5140951-5141394 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 75

Conread position: 75-312
Cow position: chr9:8406310-8406072 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 94, 42

Conread position: 75-435
Cow position: chr9:5053324-5052955 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 246
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 14, 19

Conread position: 92-341
Cow position: chr9:2637447-2637190 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 141

Conread position: 92-449
Cow position: chr9:2634248-2633865 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 260
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 72, 141

Conread position: 99-470
Cow position: chr9:52725283-52724897 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 141

Conread position: 101-470
Cow position: chr9:2034113-2034489 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 267
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 20, 11

Conread position: 122-447
Cow position: chr9:27310797-27310456 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 20

Conread position: 145-314
Cow position: chr9:43075323-43075491 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 25, 10

Conread position: 153-426
Cow position: chr9:16745667-16745953 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 241

Conread position: 153-452
Cow position: chr9:60459179-60459476 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 213
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 112, 73

Conread position: 153-470
Cow position: chr9:49271343-49271029 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 229
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 189, 38

Conread position: 164-468
Cow position: chr9:14960953-14961267 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 71, 58

Conread position: 168-414
Cow position: chr9:38193019-38193265 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 62, 72

Conread position: 169-412
Cow position: chr9:8779230-8778974 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 52, 60

Conread position: 169-444
Cow position: chr9:38692524-38692244 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 98, 38

Conread position: 170-444
Cow position: chr9:2597671-2597388 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 194
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 108, 45

Conread position: 172-447
Cow position: chr9:8950918-8951199 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 25

Conread position: 174-418
Cow position: chr9:34286815-34287062 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 43

Conread position: 174-470
Cow position: chr9:9200708-9200400 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 95, 19

Conread position: 185-412
Cow position: chr9:847889-847657 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 48

Conread position: 188-470
Cow position: chr9:32395972-32396269 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 217
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 82, 31

Conread position: 190-438
Cow position: chr9:33847044-33846787 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 22

Conread position: 205-461
Cow position: chr9:36490848-36490583 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 66, 0

Show alignments to all cow chromosomes.