Cow genome map


           Conread name:
           rsto236_j17.y1
        

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               160, 221
               

               Conread position:
               1-446
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 47
               

               Conread position:
               1-446
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               301
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               150, 87
               

               Conread position:
               3-162
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               3-224
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               155, 25
               

               Conread position:
               3-224
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               165, 128
               

               Conread position:
               3-252
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               215, 163
               

               Conread position:
               3-257
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               149, 198
               

               Conread position:
               3-298
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               95, 84
               

               Conread position:
               3-408
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 63
               

               Conread position:
               3-424
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               290
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               137, 37
               

               Conread position:
               3-442
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 75
               

               Conread position:
               3-444
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               310
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               152, 72
               

               Conread position:
               3-452
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 104
               

               Conread position:
               3-470
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 178
               

               Conread position:
               4-210
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               157, 94
               

               Conread position:
               5-218
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               108, 96
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 21
               

               Conread position:
               5-451
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 119
               

               Conread position:
               6-451
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 184
               

               Conread position:
               6-470
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 113
               

               Conread position:
               7-212
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               31, 128
               

               Conread position:
               7-470
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 88
               

               Conread position:
               10-431
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               302
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               130, 33
               

               Conread position:
               10-441
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               303
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               79, 75
               

               Conread position:
               12-436
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               302
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               78, 12
               

               Conread position:
               13-415
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 153
               

               Conread position:
               14-464
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               281
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               184, 122
               

               Conread position:
               16-447
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 212
               

               Conread position:
               23-470
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 98
               

               Conread position:
               26-261
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               109, 89
               

               Conread position:
               28-452
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               293
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               203, 45
               

               Conread position:
               30-459
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 66
               

               Conread position:
               31-258
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 52
               

               Conread position:
               31-341
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               130, 211
               

               Conread position:
               35-452
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               289
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               47, 123
               

               Conread position:
               42-225
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               44-306
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               39, 172
               

               Conread position:
               44-470
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 75
               

               Conread position:
               75-312
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               94, 42
               

               Conread position:
               75-435
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               14, 19
               

               Conread position:
               92-341
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               74, 141
               

               Conread position:
               92-449
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               72, 141
               

               Conread position:
               99-470
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 141
               

               Conread position:
               101-470
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               267
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               122-447
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               39, 20
               

               Conread position:
               145-314
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               25, 10
               

               Conread position:
               153-426
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 241
               

               Conread position:
               153-452
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               112, 73
               

               Conread position:
               153-470
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               189, 38
               

               Conread position:
               164-468
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               223
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               71, 58
               

               Conread position:
               168-414
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               62, 72
               

               Conread position:
               169-412
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               52, 60
               

               Conread position:
               169-444
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               98, 38
               

               Conread position:
               170-444
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               108, 45
               

               Conread position:
               172-447
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 25
               

               Conread position:
               174-418
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               60, 43
               

               Conread position:
               174-470
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               227
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               95, 19
               

               Conread position:
               185-412
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 48
               

               Conread position:
               188-470
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               82, 31
               

               Conread position:
               190-438
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               84, 22
               

               Conread position:
               205-461
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               66, 0
               
Show alignments to all cow chromosomes.