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Cow genome map

           
Conread name:
           
rsug07_b12.y1
        

               
Conread position:
               
1-282
               

               
Cow position:
               
chr16:11100187-11099904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 10
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr16:45173941-45173653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr16:13713286-13712987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr16:15408266-15407927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 6
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr16:31558501-31558851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 12
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr16:5726537-5726885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 12
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr16:25965116-25965465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 10
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr16:49253130-49252788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 12
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr16:53225197-53224850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
28, 6
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr16:53509381-53509010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr16:30209387-30209760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 13
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr16:7917408-7917816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 6
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr16:30143607-30143192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 13
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr16:30289922-30290322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 165
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr16:51710525-51710116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr16:8807483-8807078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 13
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr16:26500769-26501173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 163
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr16:18205568-18205981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 10
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr16:7665234-7665660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 12
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr16:4972418-4971999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 10
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr16:7456849-7456430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 10
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr16:52855415-52855003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr16:53814049-53813623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 13
               

               
Conread position:
               
2-398
               

               
Cow position:
               
chr16:4910924-4910512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
2-413
               

               
Cow position:
               
chr16:26677072-26676658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 122
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr16:51043247-51043557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
66, 121
               

               
Conread position:
               
3-352
               

               
Cow position:
               
chr16:55042944-55042594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
191, 10
               

               
Conread position:
               
3-375
               

               
Cow position:
               
chr16:7083124-7082749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 11
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr16:9787189-9787568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
118, 10
               

               
Conread position:
               
3-398
               

               
Cow position:
               
chr16:56876042-56875650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
10, 96
               

               
Conread position:
               
3-399
               

               
Cow position:
               
chr16:17665248-17665647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 16
               

               
Conread position:
               
3-399
               

               
Cow position:
               
chr16:45139275-45139685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 160
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr16:9497660-9497247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 10
               

               
Conread position:
               
3-408
               

               
Cow position:
               
chr16:18354331-18353933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 30
               

               
Conread position:
               
3-408
               

               
Cow position:
               
chr16:42339813-42340219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 89
               

               
Conread position:
               
3-413
               

               
Cow position:
               
chr16:819876-820278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
134, 72
               

               
Conread position:
               
3-413
               

               
Cow position:
               
chr16:6693001-6692573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 119
               

               
Conread position:
               
3-413
               

               
Cow position:
               
chr16:13698113-13698543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
3-414
               

               
Cow position:
               
chr16:600553-600975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 10
               

               
Conread position:
               
4-385
               

               
Cow position:
               
chr16:16265488-16265101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
4-399
               

               
Cow position:
               
chr16:5416145-5415744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
4-408
               

               
Cow position:
               
chr16:45731762-45731364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
117, 10
               

               
Conread position:
               
4-414
               

               
Cow position:
               
chr16:51500542-51500961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
117, 96
               

               
Conread position:
               
5-324
               

               
Cow position:
               
chr16:30638949-30639274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
116, 157
               

               
Conread position:
               
5-325
               

               
Cow position:
               
chr16:44138928-44138608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 37
               

               
Conread position:
               
5-358
               

               
Cow position:
               
chr16:6379498-6379141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 40
               

               
Conread position:
               
5-389
               

               
Cow position:
               
chr16:7498679-7499059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 155
               

               
Conread position:
               
5-391
               

               
Cow position:
               
chr16:39164872-39165246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
213, 95
               

               
Conread position:
               
6-289
               

               
Cow position:
               
chr16:26074789-26075061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
133, 157
               

               
Conread position:
               
6-293
               

               
Cow position:
               
chr16:45157820-45157537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
212, 29
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr16:32837921-32837616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
215, 9
               

               
Conread position:
               
6-330
               

               
Cow position:
               
chr16:41752970-41752635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
135, 54
               

               
Conread position:
               
6-333
               

               
Cow position:
               
chr16:28112303-28111979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
121, 153
               

               
Conread position:
               
6-347
               

               
Cow position:
               
chr16:23066285-23066618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
115, 35
               

               
Conread position:
               
6-349
               

               
Cow position:
               
chr16:4981752-4981423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
136, 27
               

               
Conread position:
               
6-352
               

               
Cow position:
               
chr16:15188808-15189144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 155
               

               
Conread position:
               
6-387
               

               
Cow position:
               
chr16:48370335-48369953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
115, 149
               

               
Conread position:
               
6-390
               

               
Cow position:
               
chr16:43804111-43804492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 33
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr16:11103226-11102793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 172
               

               
Conread position:
               
7-217
               

               
Cow position:
               
chr16:17288403-17288621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
114, 165
               

               
Conread position:
               
7-256
               

               
Cow position:
               
chr16:50453245-50453488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
208, 120
               

               
Conread position:
               
7-269
               

               
Cow position:
               
chr16:50516293-50516024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
81, 159
               

               
Conread position:
               
7-277
               

               
Cow position:
               
chr16:8439001-8438744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
114, 74
               

               
Conread position:
               
7-285
               

               
Cow position:
               
chr16:20662749-20663045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
114, 193
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr16:13177012-13177310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 160
               

               
Conread position:
               
7-300
               

               
Cow position:
               
chr16:14722129-14721839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 78
               

               
Conread position:
               
7-315
               

               
Cow position:
               
chr16:48424618-48424917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
130, 94
               

               
Conread position:
               
7-322
               

               
Cow position:
               
chr16:42073348-42073035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 153
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr16:36930698-36930388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
200, 46
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr16:39394198-39394508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
114, 47
               

               
Conread position:
               
7-325
               

               
Cow position:
               
chr16:7504719-7505020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
114, 26
               

               
Conread position:
               
7-327
               

               
Cow position:
               
chr16:15363366-15363679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
114, 26
               

               
Conread position:
               
7-333
               

               
Cow position:
               
chr16:23024948-23025286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
144, 117
               

               
Conread position:
               
7-333
               

               
Cow position:
               
chr16:49126571-49126248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 153
               

               
Conread position:
               
7-333
               

               
Cow position:
               
chr16:49141946-49141624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 153
               

               
Conread position:
               
7-352
               

               
Cow position:
               
chr16:7152543-7152209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 13
               

               
Conread position:
               
7-352
               

               
Cow position:
               
chr16:30939354-30939697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 50
               

               
Conread position:
               
7-352
               

               
Cow position:
               
chr16:48087257-48086907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 24
               

               
Conread position:
               
7-353
               

               
Cow position:
               
chr16:32327272-32327612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
55, 84
               

               
Conread position:
               
7-365
               

               
Cow position:
               
chr16:15255337-15254975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 151
               

               
Conread position:
               
7-370
               

               
Cow position:
               
chr16:43801279-43800940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
326, 31
               

               
Conread position:
               
7-389
               

               
Cow position:
               
chr16:16424992-16424606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 161
               

               
Conread position:
               
7-392
               

               
Cow position:
               
chr16:11568497-11568111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 75
               

               
Conread position:
               
7-395
               

               
Cow position:
               
chr16:16177432-16177828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 82
               

               
Conread position:
               
7-396
               

               
Cow position:
               
chr16:31159958-31159561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 85
               

               
Conread position:
               
7-396
               

               
Cow position:
               
chr16:45609598-45609998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 153
               

               
Conread position:
               
7-397
               

               
Cow position:
               
chr16:2223792-2223385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 96
               

               
Conread position:
               
7-397
               

               
Cow position:
               
chr16:30311493-30311100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 92
               

               
Conread position:
               
7-398
               

               
Cow position:
               
chr16:15370297-15370697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 18
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr16:33226919-33226524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 80
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr16:41037299-41037704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 150
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr16:42218081-42217676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 162
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr16:56149926-56150310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 42
               

               
Conread position:
               
7-400
               

               
Cow position:
               
chr16:54578784-54579182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 117
               

               
Conread position:
               
7-408
               

               
Cow position:
               
chr16:4399337-4399758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 53
               

               
Conread position:
               
7-408
               

               
Cow position:
               
chr16:13307253-13306849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 155
               

               
Conread position:
               
7-408
               

               
Cow position:
               
chr16:24228739-24228329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 154
               

               
Conread position:
               
7-408
               

               
Cow position:
               
chr16:49169767-49169358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 111
               

               
Conread position:
               
7-409
               

               
Cow position:
               
chr16:33507678-33508077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 71
               

               
Conread position:
               
7-409
               

               
Cow position:
               
chr16:45603300-45603693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
117, 89
               

               
Conread position:
               
7-412
               

               
Cow position:
               
chr16:4699341-4698961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 85
               

               
Conread position:
               
7-412
               

               
Cow position:
               
chr16:16096358-16096767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 88
               

               
Conread position:
               
7-412
               

               
Cow position:
               
chr16:46552419-46552821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 224
               

               
Conread position:
               
7-412
               

               
Cow position:
               
chr16:55682905-55683327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 162
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr16:14758327-14758766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
70, 147
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr16:18758227-18757811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
108, 74
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr16:22804961-22804570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
135, 89
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr16:35187867-35188281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 26
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr16:44676503-44676902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
132, 102
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr16:49125908-49125501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 153
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr16:49230158-49229740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 272
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr16:56913100-56912685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 51
               

               
Conread position:
               
7-414
               

               
Cow position:
               
chr16:11105163-11105583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 99
               

               
Conread position:
               
7-414
               

               
Cow position:
               
chr16:13989598-13990004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
114, 159
               

               
Conread position:
               
7-414
               

               
Cow position:
               
chr16:18678810-18679227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
114, 80
               

               
Conread position:
               
7-414
               

               
Cow position:
               
chr16:24147770-24148190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 150
               

               
Conread position:
               
7-414
               

               
Cow position:
               
chr16:31978576-31978157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 159
               

               
Conread position:
               
7-414
               

               
Cow position:
               
chr16:40561838-40562261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 153
               

               
Conread position:
               
7-414
               

               
Cow position:
               
chr16:48341076-48340665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 39
               

               
Conread position:
               
7-414
               

               
Cow position:
               
chr16:48398631-48398225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 151
               

               
Conread position:
               
7-415
               

               
Cow position:
               
chr16:56231434-56231857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
19, 154
               

               
Conread position:
               
8-300
               

               
Cow position:
               
chr16:7467755-7468055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
119, 171
               

               
Conread position:
               
8-322
               

               
Cow position:
               
chr16:23823398-23823085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 90
               

               
Conread position:
               
8-324
               

               
Cow position:
               
chr16:39616359-39616674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
113, 53
               

               
Conread position:
               
8-333
               

               
Cow position:
               
chr16:14441504-14441832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
7, 285
               

               
Conread position:
               
8-338
               

               
Cow position:
               
chr16:53267337-53267668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
69, 244
               

               
Conread position:
               
8-370
               

               
Cow position:
               
chr16:20734134-20733782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
114, 152
               

               
Conread position:
               
8-377
               

               
Cow position:
               
chr16:29089678-29089303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
113, 159
               

               
Conread position:
               
8-397
               

               
Cow position:
               
chr16:5654129-5654521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 119
               

               
Conread position:
               
8-400
               

               
Cow position:
               
chr16:29823321-29822921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 61
               

               
Conread position:
               
8-412
               

               
Cow position:
               
chr16:29654941-29655352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 94
               

               
Conread position:
               
9-390
               

               
Cow position:
               
chr16:39385015-39385415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 157
               

               
Conread position:
               
9-413
               

               
Cow position:
               
chr16:16402714-16402295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 152
               

               
Conread position:
               
10-278
               

               
Cow position:
               
chr16:54099979-54100244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
5, 154
               

               
Conread position:
               
10-376
               

               
Cow position:
               
chr16:31122639-31122270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 160
               

               
Conread position:
               
12-355
               

               
Cow position:
               
chr16:32132151-32132491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 70
               

               
Conread position:
               
12-413
               

               
Cow position:
               
chr16:8840509-8840920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 154
               

               
Conread position:
               
13-399
               

               
Cow position:
               
chr16:12633529-12633898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
124, 7
               

               
Conread position:
               
13-414
               

               
Cow position:
               
chr16:9973875-9973470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 75
               

               
Conread position:
               
14-289
               

               
Cow position:
               
chr16:47341863-47341579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
119, 12
               

               
Conread position:
               
14-398
               

               
Cow position:
               
chr16:56832127-56831728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 152
               

               
Conread position:
               
14-399
               

               
Cow position:
               
chr16:7541910-7542303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 146
               

               
Conread position:
               
14-411
               

               
Cow position:
               
chr16:18141707-18141300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 143
               

               
Conread position:
               
15-373
               

               
Cow position:
               
chr16:8620870-8621216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 145
               

               
Conread position:
               
15-408
               

               
Cow position:
               
chr16:24825687-24826096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 270
               

               
Conread position:
               
15-414
               

               
Cow position:
               
chr16:55308914-55308512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
106, 10
               

               
Conread position:
               
16-370
               

               
Cow position:
               
chr16:23737806-23738157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
16-376
               

               
Cow position:
               
chr16:43275643-43276012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 144
               

               
Conread position:
               
16-399
               

               
Cow position:
               
chr16:38709198-38708823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
17-363
               

               
Cow position:
               
chr16:23990863-23990509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
19-316
               

               
Cow position:
               
chr16:33777443-33777738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
102, 141
               

               
Conread position:
               
20-283
               

               
Cow position:
               
chr16:9948413-9948687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
21-300
               

               
Cow position:
               
chr16:33675132-33674843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
77, 94
               

               
Conread position:
               
21-399
               

               
Cow position:
               
chr16:4502906-4503296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 139
               

               
Conread position:
               
22-321
               

               
Cow position:
               
chr16:5293285-5293588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 143
               

               
Conread position:
               
23-399
               

               
Cow position:
               
chr16:4144688-4145080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 148
               

               
Conread position:
               
24-400
               

               
Cow position:
               
chr16:47017611-47017245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
113, 43
               

               
Conread position:
               
25-400
               

               
Cow position:
               
chr16:33299024-33299409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
26-365
               

               
Cow position:
               
chr16:30909283-30908951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
192, 19
               

               
Conread position:
               
32-218
               

               
Cow position:
               
chr16:22340726-22340910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
89, 134
               

               
Conread position:
               
34-333
               

               
Cow position:
               
chr16:32586841-32587138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 129
               

               
Conread position:
               
35-399
               

               
Cow position:
               
chr16:44973129-44973508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 39
               

               
Conread position:
               
35-409
               

               
Cow position:
               
chr16:9790985-9790606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
35-413
               

               
Cow position:
               
chr16:14754689-14754299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
35-413
               

               
Cow position:
               
chr16:35757857-35758230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
101, 122
               

               
Conread position:
               
37-305
               

               
Cow position:
               
chr16:8706908-8706635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 59
               

               
Conread position:
               
38-279
               

               
Cow position:
               
chr16:46453120-46452874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
103, 73
               

               
Conread position:
               
38-414
               

               
Cow position:
               
chr16:33645664-33646044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
41-304
               

               
Cow position:
               
chr16:51508469-51508209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
177, 63
               

               
Conread position:
               
41-397
               

               
Cow position:
               
chr16:42242464-42242105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
80, 37
               

               
Conread position:
               
41-401
               

               
Cow position:
               
chr16:4103514-4103146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 123
               

               
Conread position:
               
42-278
               

               
Cow position:
               
chr16:48607425-48607182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 120
               

               
Conread position:
               
42-284
               

               
Cow position:
               
chr16:56445755-56445503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
79, 118
               

               
Conread position:
               
42-414
               

               
Cow position:
               
chr16:39514437-39514044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 123
               

               
Conread position:
               
42-415
               

               
Cow position:
               
chr16:48096115-48095735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
79, 62
               

               
Conread position:
               
43-391
               

               
Cow position:
               
chr16:13195680-13195339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 88
               

               
Conread position:
               
43-414
               

               
Cow position:
               
chr16:52789714-52790084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
78, 55
               

               
Conread position:
               
44-408
               

               
Cow position:
               
chr16:38664058-38663687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 7
               

               
Conread position:
               
46-312
               

               
Cow position:
               
chr16:56185806-56185538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
75, 114
               

               
Conread position:
               
46-385
               

               
Cow position:
               
chr16:25288056-25287691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
75, 254
               

               
Conread position:
               
51-415
               

               
Cow position:
               
chr16:21450510-21450877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 68
               

               
Conread position:
               
52-392
               

               
Cow position:
               
chr16:4626737-4626384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 87
               

               
Conread position:
               
52-399
               

               
Cow position:
               
chr16:53427914-53428271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
69, 93
               

               
Conread position:
               
52-400
               

               
Cow position:
               
chr16:53554054-53553704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
168, 11
               

               
Conread position:
               
60-400
               

               
Cow position:
               
chr16:29066833-29067176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 100
               

               
Conread position:
               
60-408
               

               
Cow position:
               
chr16:13791170-13791540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
61, 107
               

               
Conread position:
               
60-413
               

               
Cow position:
               
chr16:11775382-11775024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
61-324
               

               
Cow position:
               
chr16:30715158-30715427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
60, 105
               

               
Conread position:
               
61-399
               

               
Cow position:
               
chr16:11790667-11791027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 117
               

               
Conread position:
               
61-399
               

               
Cow position:
               
chr16:16548274-16548627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
63-276
               

               
Cow position:
               
chr16:5910949-5911170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
63-382
               

               
Cow position:
               
chr16:28191738-28192067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
73, 94
               

               
Conread position:
               
64-325
               

               
Cow position:
               
chr16:23730267-23729994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
66-352
               

               
Cow position:
               
chr16:23472414-23472710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 101
               

               
Conread position:
               
68-324
               

               
Cow position:
               
chr16:48956479-48956736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
74, 89
               

               
Conread position:
               
68-397
               

               
Cow position:
               
chr16:15808645-15808980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
71-332
               

               
Cow position:
               
chr16:590227-589977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
66, 53
               

               
Conread position:
               
72-390
               

               
Cow position:
               
chr16:5845346-5845673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
76-414
               

               
Cow position:
               
chr16:7078057-7077714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
45, 93
               

               
Conread position:
               
77-334
               

               
Cow position:
               
chr16:37062710-37062454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
45, 83
               

               
Conread position:
               
77-399
               

               
Cow position:
               
chr16:1549192-1548864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 71
               

               
Conread position:
               
82-351
               

               
Cow position:
               
chr16:32385132-32384860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 87
               

               
Conread position:
               
84-359
               

               
Cow position:
               
chr16:37379959-37380236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
53, 85
               

               
Conread position:
               
84-400
               

               
Cow position:
               
chr16:39279389-39279055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
92-398
               

               
Cow position:
               
chr16:53627723-53627415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
50, 65
               

               
Conread position:
               
93-289
               

               
Cow position:
               
chr16:19003819-19003616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
48, 64
               

               
Conread position:
               
103-292
               

               
Cow position:
               
chr16:43724498-43724693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
103-342
               

               
Cow position:
               
chr16:14360815-14361056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
103-400
               

               
Cow position:
               
chr16:42253862-42253543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
103-409
               

               
Cow position:
               
chr16:3633000-3633318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
103-414
               

               
Cow position:
               
chr16:23482996-23483311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 63
               

               
Conread position:
               
104-333
               

               
Cow position:
               
chr16:35343766-35343529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
17, 62
               

               
Conread position:
               
104-399
               

               
Cow position:
               
chr16:51869347-51869653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 62
               

               
Conread position:
               
113-409
               

               
Cow position:
               
chr16:39417386-39417096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
114-408
               

               
Cow position:
               
chr16:15960572-15960267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
23, 43
               

               
Conread position:
               
115-339
               

               
Cow position:
               
chr16:33751920-33752142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
115-373
               

               
Cow position:
               
chr16:56198241-56198503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
115-408
               

               
Cow position:
               
chr16:43506077-43505782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
115-414
               

               
Cow position:
               
chr16:14106369-14106671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
27, 49
               

               
Conread position:
               
115-414
               

               
Cow position:
               
chr16:34168318-34168615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
115-415
               

               
Cow position:
               
chr16:29379977-29380279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
115-416
               

               
Cow position:
               
chr16:35937059-35937370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 42
               

               
Conread position:
               
116-413
               

               
Cow position:
               
chr16:20025171-20025472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
100, 8
               

               
Conread position:
               
118-414
               

               
Cow position:
               
chr16:4902327-4902617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
121-399
               

               
Cow position:
               
chr16:20476261-20476549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
16, 142
               

               
Conread position:
               
121-399
               

               
Cow position:
               
chr16:29608247-29608524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
121-414
               

               
Cow position:
               
chr16:47820300-47820597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
123-333
               

               
Cow position:
               
chr16:7429111-7429318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
163, 12
               

               
Conread position:
               
123-333
               

               
Cow position:
               
chr16:51070196-51069978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
92, 12
               

               
Conread position:
               
124-385
               

               
Cow position:
               
chr16:3614478-3614747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 35
               

               
Conread position:
               
124-399
               

               
Cow position:
               
chr16:39705108-39704825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
126-334
               

               
Cow position:
               
chr16:53892046-53891841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
86, 30
               

               
Conread position:
               
126-338
               

               
Cow position:
               
chr16:24403464-24403684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
126-383
               

               
Cow position:
               
chr16:9235745-9235478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
126-392
               

               
Cow position:
               
chr16:53086590-53086330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
126-397
               

               
Cow position:
               
chr16:37116808-37117079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 37
               

               
Conread position:
               
126-399
               

               
Cow position:
               
chr16:14242109-14242385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
127-324
               

               
Cow position:
               
chr16:15320734-15320534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
127-325
               

               
Cow position:
               
chr16:53988983-53989173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
133, 8
               

               
Conread position:
               
127-333
               

               
Cow position:
               
chr16:47662450-47662654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
93, 8
               

               
Conread position:
               
127-399
               

               
Cow position:
               
chr16:52889673-52889396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
94, 8
               

               
Conread position:
               
127-400
               

               
Cow position:
               
chr16:17745569-17745851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
127-407
               

               
Cow position:
               
chr16:8522651-8522363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 13
               

               
Conread position:
               
127-408
               

               
Cow position:
               
chr16:18402433-18402710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
198, 8
               

               
Conread position:
               
127-413
               

               
Cow position:
               
chr16:7619461-7619149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
127-413
               

               
Cow position:
               
chr16:13611710-13611426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
127-413
               

               
Cow position:
               
chr16:50282694-50282405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
123, 12
               

               
Conread position:
               
127-414
               

               
Cow position:
               
chr16:8367090-8366801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
128-408
               

               
Cow position:
               
chr16:3246456-3246182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
128-414
               

               
Cow position:
               
chr16:56522733-56522441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
130-333
               

               
Cow position:
               
chr16:902147-901942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
88, 5
               

               
Conread position:
               
131-314
               

               
Cow position:
               
chr16:16231822-16232008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
131-391
               

               
Cow position:
               
chr16:35623511-35623238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
6, 162
               

               
Conread position:
               
131-400
               

               
Cow position:
               
chr16:10040099-10039829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
132-335
               

               
Cow position:
               
chr16:45813954-45813760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
133-385
               

               
Cow position:
               
chr16:571174-570916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
84, 23
               

               
Conread position:
               
133-399
               

               
Cow position:
               
chr16:13752381-13752118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
135-254
               

               
Cow position:
               
chr16:22052190-22052307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
135-395
               

               
Cow position:
               
chr16:8933675-8933415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
82, 26
               

               
Conread position:
               
135-399
               

               
Cow position:
               
chr16:14568741-14568475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
135-414
               

               
Cow position:
               
chr16:5636333-5636616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
22, 84
               

               
Conread position:
               
135-414
               

               
Cow position:
               
chr16:26649889-26649600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
135-414
               

               
Cow position:
               
chr16:35195866-35195584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
135-414
               

               
Cow position:
               
chr16:44744388-44744104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
129, 27
               

               
Conread position:
               
136-333
               

               
Cow position:
               
chr16:25484113-25484305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
81, 25
               

               
Conread position:
               
137-413
               

               
Cow position:
               
chr16:22842307-22842029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
190, 25
               

               
Conread position:
               
139-408
               

               
Cow position:
               
chr16:33588416-33588690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
69, 23
               

               
Conread position:
               
139-408
               

               
Cow position:
               
chr16:38905478-38905211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
140-328
               

               
Cow position:
               
chr16:46353825-46353651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
140-333
               

               
Cow position:
               
chr16:5363641-5363836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
78, 22
               

               
Conread position:
               
140-352
               

               
Cow position:
               
chr16:42633999-42633789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
137, 24
               

               
Conread position:
               
140-365
               

               
Cow position:
               
chr16:238010-238242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
140-384
               

               
Cow position:
               
chr16:48145650-48145400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
70, 16
               

               
Conread position:
               
140-395
               

               
Cow position:
               
chr16:11008093-11008355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
140-397
               

               
Cow position:
               
chr16:37452867-37452602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
80, 50
               

               
Conread position:
               
140-399
               

               
Cow position:
               
chr16:19408764-19408514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
104, 23
               

               
Conread position:
               
140-414
               

               
Cow position:
               
chr16:5256752-5257025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
140-414
               

               
Cow position:
               
chr16:9985633-9985364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
140-414
               

               
Cow position:
               
chr16:42777712-42777993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
140-414
               

               
Cow position:
               
chr16:47245337-47245618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
194, 22
               

               
Conread position:
               
141-271
               

               
Cow position:
               
chr16:16932747-16932878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
141-304
               

               
Cow position:
               
chr16:18574135-18574305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
141-324
               

               
Cow position:
               
chr16:43152955-43152775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
141-349
               

               
Cow position:
               
chr16:43661203-43661402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
192, 23
               

               
Conread position:
               
141-352
               

               
Cow position:
               
chr16:52182034-52182230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
141-387
               

               
Cow position:
               
chr16:5741005-5741242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
190, 15
               

               
Conread position:
               
141-413
               

               
Cow position:
               
chr16:22868424-22868150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
141-414
               

               
Cow position:
               
chr16:16597312-16597586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
142-414
               

               
Cow position:
               
chr16:11806433-11806700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
208, 14
               

               
Conread position:
               
144-398
               

               
Cow position:
               
chr16:47620133-47620392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
145-373
               

               
Cow position:
               
chr16:54515481-54515706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
181, 11
               

               
Conread position:
               
148-406
               

               
Cow position:
               
chr16:47336487-47336756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
152-413
               

               
Cow position:
               
chr16:45534942-45535206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
65, 98
               

               
Conread position:
               
153-384
               

               
Cow position:
               
chr16:8812327-8812085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
154-399
               

               
Cow position:
               
chr16:13233184-13232935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
58, 94
               

               
Conread position:
               
154-414
               

               
Cow position:
               
chr16:594470-594195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 135
               

               
Conread position:
               
156-413
               

               
Cow position:
               
chr16:11274672-11274931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
156-414
               

               
Cow position:
               
chr16:1725310-1725044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
116, 52
               

               
Conread position:
               
157-325
               

               
Cow position:
               
chr16:11422074-11422243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 120
               

               
Conread position:
               
157-333
               

               
Cow position:
               
chr16:45046392-45046562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 121
               

               
Conread position:
               
157-352
               

               
Cow position:
               
chr16:8193213-8193413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 15
               

               
Conread position:
               
157-392
               

               
Cow position:
               
chr16:23810686-23810918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
176, 73
               

               
Conread position:
               
157-399
               

               
Cow position:
               
chr16:29557867-29557616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
61, 134
               

               
Conread position:
               
157-408
               

               
Cow position:
               
chr16:35168489-35168753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
63, 124
               

               
Conread position:
               
157-414
               

               
Cow position:
               
chr16:51246727-51246976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
182, 54
               

               
Conread position:
               
158-333
               

               
Cow position:
               
chr16:4134631-4134813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
61, 133
               

               
Conread position:
               
158-349
               

               
Cow position:
               
chr16:30037229-30037032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 26
               

               
Conread position:
               
158-360
               

               
Cow position:
               
chr16:45047858-45047661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
175, 8
               

               
Conread position:
               
158-370
               

               
Cow position:
               
chr16:4875763-4875974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
69, 60
               

               
Conread position:
               
158-400
               

               
Cow position:
               
chr16:4192655-4192410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 120
               

               
Conread position:
               
158-413
               

               
Cow position:
               
chr16:53048316-53048580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 133
               

               
Conread position:
               
158-414
               

               
Cow position:
               
chr16:11615463-11615216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
67, 60
               

               
Conread position:
               
158-414
               

               
Cow position:
               
chr16:29399758-29400016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
26, 136
               

               
Conread position:
               
159-313
               

               
Cow position:
               
chr16:39695711-39695551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
60, 132
               

               
Conread position:
               
159-369
               

               
Cow position:
               
chr16:5896185-5896400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
21, 25
               

               
Conread position:
               
159-399
               

               
Cow position:
               
chr16:56082594-56082351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 110
               

               
Conread position:
               
160-347
               

               
Cow position:
               
chr16:4277947-4277762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
61, 118
               

               
Conread position:
               
160-400
               

               
Cow position:
               
chr16:10148048-10148297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
172, 207
               

               
Conread position:
               
163-414
               

               
Cow position:
               
chr16:48191232-48190980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 116
               

               
Conread position:
               
164-333
               

               
Cow position:
               
chr16:15504755-15504579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 118
               

               
Conread position:
               
165-413
               

               
Cow position:
               
chr16:27249181-27249432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 114
               

               
Conread position:
               
165-413
               

               
Cow position:
               
chr16:50288929-50289180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
86, 54
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr16:49336000-49336242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
52, 89
               

               
Conread position:
               
167-408
               

               
Cow position:
               
chr16:43105739-43105492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
51, 111
               

               
Conread position:
               
168-330
               

               
Cow position:
               
chr16:26703140-26702980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 118
               

               
Conread position:
               
168-385
               

               
Cow position:
               
chr16:20634103-20633877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 110
               

               
Conread position:
               
168-406
               

               
Cow position:
               
chr16:5352056-5351821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
168-413
               

               
Cow position:
               
chr16:43308794-43308533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
50, 242
               

               
Conread position:
               
170-314
               

               
Cow position:
               
chr16:7928366-7928515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 123
               

               
Conread position:
               
174-395
               

               
Cow position:
               
chr16:8323205-8322972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
30, 108
               

               
Conread position:
               
174-414
               

               
Cow position:
               
chr16:56787996-56787747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
176-333
               

               
Cow position:
               
chr16:45677069-45676912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 101
               

               
Conread position:
               
176-396
               

               
Cow position:
               
chr16:28692927-28692710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
157, 31
               

               
Conread position:
               
178-413
               

               
Cow position:
               
chr16:8066096-8065860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
154, 95
               

               
Conread position:
               
181-399
               

               
Cow position:
               
chr16:10592228-10592447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
154, 37
               

               
Conread position:
               
184-327
               

               
Cow position:
               
chr16:9615444-9615305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
45, 34
               

               
Conread position:
               
187-399
               

               
Cow position:
               
chr16:22860965-22860755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
38, 31
               

               
Conread position:
               
189-365
               

               
Cow position:
               
chr16:17982348-17982167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
193-413
               

               
Cow position:
               
chr16:52275330-52275101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 94
               

               
Conread position:
               
194-399
               

               
Cow position:
               
chr16:14685588-14685379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 84
               

               
Conread position:
               
194-414
               

               
Cow position:
               
chr16:17626731-17626958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
24, 84
               

               
Conread position:
               
205-414
               

               
Cow position:
               
chr16:17288753-17288976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
209-408
               

               
Cow position:
               
chr16:42072907-42072710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 21
               

               
Conread position:
               
216-352
               

               
Cow position:
               
chr16:34153747-34153605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
216-408
               

               
Cow position:
               
chr16:54083861-54084059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
218-413
               

               
Cow position:
               
chr16:52133686-52133489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
117, 65
               

               
Conread position:
               
224-414
               

               
Cow position:
               
chr16:3821372-3821557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
109, 61
               

               
Conread position:
               
225-397
               

               
Cow position:
               
chr16:9136012-9136193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
108, 49
               

               
Conread position:
               
225-399
               

               
Cow position:
               
chr16:25380660-25380482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
108, 59
               

               
Conread position:
               
226-413
               

               
Cow position:
               
chr16:8076671-8076474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
109, 47
               

               
Conread position:
               
228-399
               

               
Cow position:
               
chr16:38243823-38243647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
229-399
               

               
Cow position:
               
chr16:12273908-12274084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
106, 44
               
Show alignments to all cow chromosomes.