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Cow genome map

           
Conread name:
           
rsug07_b12.y1
        

               
Conread position:
               
1-258
               

               
Cow position:
               
chr17:20855328-20855592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr17:22057526-22057251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 159
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr17:3154123-3153844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 163
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr17:16117783-16117460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 12
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr17:33289006-33288685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 10
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr17:1654034-1653719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
120, 84
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr17:6937009-6936685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 55
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr17:3518591-3518270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 12
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr17:20093475-20093136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
120, 24
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr17:21874669-21874306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 159
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr17:12289771-12289414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 10
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr17:32651264-32651634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 13
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr17:44924527-44924170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr17:38832702-38833080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 12
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr17:40289352-40288948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 12
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr17:14003478-14003877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 10
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr17:20993396-20992983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 163
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr17:21495025-21495432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 10
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr17:34595586-34595994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 10
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr17:18861070-18860658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 10
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr17:21293402-21292979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
10, 163
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr17:923528-923947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 13
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr17:3781683-3782115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr17:14249386-14248942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
119, 360
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr17:30539601-30539191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 13
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr17:4213406-4213690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
119, 12
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr17:979485-979105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
126, 11
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr17:20083862-20083534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 10
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr17:23337365-23337036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 107
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr17:23063365-23063701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 10
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr17:6566129-6566460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 11
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr17:14033997-14033589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 10
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr17:22775040-22775420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 155
               

               
Conread position:
               
3-399
               

               
Cow position:
               
chr17:43717659-43717273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 149
               

               
Conread position:
               
3-400
               

               
Cow position:
               
chr17:24580632-24580239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
215, 118
               

               
Conread position:
               
3-400
               

               
Cow position:
               
chr17:29472132-29472521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 10
               

               
Conread position:
               
3-400
               

               
Cow position:
               
chr17:32027812-32027398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 10
               

               
Conread position:
               
3-411
               

               
Cow position:
               
chr17:20780169-20780575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 10
               

               
Conread position:
               
4-414
               

               
Cow position:
               
chr17:1410595-1410169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 16
               

               
Conread position:
               
5-399
               

               
Cow position:
               
chr17:27305815-27306214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
5-400
               

               
Cow position:
               
chr17:11618231-11618643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 166
               

               
Conread position:
               
5-415
               

               
Cow position:
               
chr17:8690800-8690371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 52
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr17:30204311-30204629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
115, 28
               

               
Conread position:
               
6-347
               

               
Cow position:
               
chr17:25740601-25740951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 33
               

               
Conread position:
               
6-363
               

               
Cow position:
               
chr17:26084688-26085050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr17:37342820-37342446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
115, 20
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr17:242289-242693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 152
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr17:28539695-28540098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 119
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr17:23517513-23517246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 13
               

               
Conread position:
               
7-289
               

               
Cow position:
               
chr17:6082200-6082477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
221, 40
               

               
Conread position:
               
7-297
               

               
Cow position:
               
chr17:7251703-7251999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
121, 41
               

               
Conread position:
               
7-306
               

               
Cow position:
               
chr17:21038934-21039233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
114, 20
               

               
Conread position:
               
7-312
               

               
Cow position:
               
chr17:20269265-20269562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
114, 153
               

               
Conread position:
               
7-325
               

               
Cow position:
               
chr17:3684004-3683685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
93, 153
               

               
Conread position:
               
7-329
               

               
Cow position:
               
chr17:3386950-3387265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 150
               

               
Conread position:
               
7-333
               

               
Cow position:
               
chr17:31146-31479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
121, 153
               

               
Conread position:
               
7-333
               

               
Cow position:
               
chr17:3499011-3498682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 153
               

               
Conread position:
               
7-333
               

               
Cow position:
               
chr17:5000924-5000597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
7-333
               

               
Cow position:
               
chr17:27667541-27667207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 153
               

               
Conread position:
               
7-349
               

               
Cow position:
               
chr17:11386169-11386516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 160
               

               
Conread position:
               
7-350
               

               
Cow position:
               
chr17:18884672-18884334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
199, 87
               

               
Conread position:
               
7-352
               

               
Cow position:
               
chr17:3843147-3843483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
326, 28
               

               
Conread position:
               
7-352
               

               
Cow position:
               
chr17:21707349-21707011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
114, 171
               

               
Conread position:
               
7-352
               

               
Cow position:
               
chr17:39857071-39857392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
114, 84
               

               
Conread position:
               
7-353
               

               
Cow position:
               
chr17:42419391-42419724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 122
               

               
Conread position:
               
7-360
               

               
Cow position:
               
chr17:25542159-25541809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 159
               

               
Conread position:
               
7-361
               

               
Cow position:
               
chr17:13922132-13922490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 13
               

               
Conread position:
               
7-365
               

               
Cow position:
               
chr17:15363908-15363544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
138, 44
               

               
Conread position:
               
7-365
               

               
Cow position:
               
chr17:20233880-20234244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 150
               

               
Conread position:
               
7-391
               

               
Cow position:
               
chr17:34317064-34316668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
51, 55
               

               
Conread position:
               
7-392
               

               
Cow position:
               
chr17:25188936-25189336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 148
               

               
Conread position:
               
7-395
               

               
Cow position:
               
chr17:27679591-27679187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 159
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr17:1568516-1568125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
130, 104
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr17:4601889-4601492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
211, 33
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr17:5246538-5246948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
119, 292
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr17:10649502-10649883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 90
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr17:11839354-11839770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 148
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr17:12059439-12059038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 18
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr17:13144029-13143634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 114
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr17:15300211-15299818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 105
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr17:20033259-20032858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 18
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr17:21960025-21959634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 85
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr17:24549822-24550231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 156
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr17:30529876-30529491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 37
               

               
Conread position:
               
7-400
               

               
Cow position:
               
chr17:20358532-20358921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 32
               

               
Conread position:
               
7-400
               

               
Cow position:
               
chr17:41394056-41393660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
135, 141
               

               
Conread position:
               
7-401
               

               
Cow position:
               
chr17:11056724-11056313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
7-405
               

               
Cow position:
               
chr17:41029605-41030011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 153
               

               
Conread position:
               
7-408
               

               
Cow position:
               
chr17:11102130-11101740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 92
               

               
Conread position:
               
7-408
               

               
Cow position:
               
chr17:16446778-16446373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 153
               

               
Conread position:
               
7-408
               

               
Cow position:
               
chr17:20848189-20848586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 74
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr17:17221998-17222408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 85
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr17:22563848-22564256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 114
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr17:30664928-30665340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 97
               

               
Conread position:
               
7-414
               

               
Cow position:
               
chr17:15103226-15102825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 35
               

               
Conread position:
               
7-414
               

               
Cow position:
               
chr17:18592090-18592511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 155
               

               
Conread position:
               
7-414
               

               
Cow position:
               
chr17:21336044-21335623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 81
               

               
Conread position:
               
7-414
               

               
Cow position:
               
chr17:23101554-23101150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 115
               

               
Conread position:
               
7-414
               

               
Cow position:
               
chr17:24553658-24554065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 36
               

               
Conread position:
               
7-414
               

               
Cow position:
               
chr17:36331309-36330888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 82
               

               
Conread position:
               
8-324
               

               
Cow position:
               
chr17:5997449-5997118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 166
               

               
Conread position:
               
8-333
               

               
Cow position:
               
chr17:6263562-6263894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
119, 152
               

               
Conread position:
               
8-333
               

               
Cow position:
               
chr17:10529090-10528753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 161
               

               
Conread position:
               
8-333
               

               
Cow position:
               
chr17:25167967-25168300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 158
               

               
Conread position:
               
8-347
               

               
Cow position:
               
chr17:18494868-18494517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
68, 159
               

               
Conread position:
               
8-352
               

               
Cow position:
               
chr17:26230593-26230954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 158
               

               
Conread position:
               
8-408
               

               
Cow position:
               
chr17:5900039-5900432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
9-267
               

               
Cow position:
               
chr17:11913045-11912782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 151
               

               
Conread position:
               
9-269
               

               
Cow position:
               
chr17:17983119-17982856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 142
               

               
Conread position:
               
9-293
               

               
Cow position:
               
chr17:9057326-9057020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
112, 173
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr17:29715531-29715211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 151
               

               
Conread position:
               
10-414
               

               
Cow position:
               
chr17:24823921-24824311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
12-413
               

               
Cow position:
               
chr17:11397328-11397735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 138
               

               
Conread position:
               
13-298
               

               
Cow position:
               
chr17:39735845-39736126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
108, 147
               

               
Conread position:
               
13-307
               

               
Cow position:
               
chr17:8644696-8644995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 147
               

               
Conread position:
               
14-322
               

               
Cow position:
               
chr17:35388353-35388042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
113, 21
               

               
Conread position:
               
14-351
               

               
Cow position:
               
chr17:13237061-13236722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
92, 85
               

               
Conread position:
               
14-413
               

               
Cow position:
               
chr17:40771489-40771904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 29
               

               
Conread position:
               
15-272
               

               
Cow position:
               
chr17:40405968-40406232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
122, 142
               

               
Conread position:
               
15-333
               

               
Cow position:
               
chr17:17061011-17060699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
122, 80
               

               
Conread position:
               
19-325
               

               
Cow position:
               
chr17:1061393-1061086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
118, 98
               

               
Conread position:
               
19-398
               

               
Cow position:
               
chr17:9564975-9565360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 73
               

               
Conread position:
               
20-399
               

               
Cow position:
               
chr17:12929877-12929483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
101, 140
               

               
Conread position:
               
21-397
               

               
Cow position:
               
chr17:24883896-24883519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
22-339
               

               
Cow position:
               
chr17:26182890-26183209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 138
               

               
Conread position:
               
22-368
               

               
Cow position:
               
chr17:21680436-21680783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 144
               

               
Conread position:
               
26-279
               

               
Cow position:
               
chr17:11375017-11374760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
95, 134
               

               
Conread position:
               
26-375
               

               
Cow position:
               
chr17:33272001-33271651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 99
               

               
Conread position:
               
26-408
               

               
Cow position:
               
chr17:27795320-27795711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 134
               

               
Conread position:
               
30-413
               

               
Cow position:
               
chr17:17683220-17682836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
195, 188
               

               
Conread position:
               
34-300
               

               
Cow position:
               
chr17:25875089-25875361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
94, 70
               

               
Conread position:
               
35-369
               

               
Cow position:
               
chr17:10473516-10473852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
86, 125
               

               
Conread position:
               
36-324
               

               
Cow position:
               
chr17:32399839-32399537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
36-400
               

               
Cow position:
               
chr17:43142038-43141654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
85, 255
               

               
Conread position:
               
37-399
               

               
Cow position:
               
chr17:40421352-40421725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
84, 123
               

               
Conread position:
               
38-352
               

               
Cow position:
               
chr17:4606656-4606960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 120
               

               
Conread position:
               
38-413
               

               
Cow position:
               
chr17:2810300-2810696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
84, 53
               

               
Conread position:
               
41-338
               

               
Cow position:
               
chr17:14026228-14025927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
80, 125
               

               
Conread position:
               
41-352
               

               
Cow position:
               
chr17:9117335-9117650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
41-399
               

               
Cow position:
               
chr17:25900886-25901254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
80, 119
               

               
Conread position:
               
41-400
               

               
Cow position:
               
chr17:34079411-34079056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 125
               

               
Conread position:
               
44-359
               

               
Cow position:
               
chr17:3306559-3306877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 65
               

               
Conread position:
               
45-399
               

               
Cow position:
               
chr17:30718725-30718364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
92, 112
               

               
Conread position:
               
45-414
               

               
Cow position:
               
chr17:40331460-40331836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
48-399
               

               
Cow position:
               
chr17:40892848-40893205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
199, 78
               

               
Conread position:
               
49-392
               

               
Cow position:
               
chr17:20090923-20090590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
88, 108
               

               
Conread position:
               
50-400
               

               
Cow position:
               
chr17:1295875-1295516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 116
               

               
Conread position:
               
50-413
               

               
Cow position:
               
chr17:1783911-1783536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
8, 119
               

               
Conread position:
               
55-399
               

               
Cow position:
               
chr17:5688646-5688307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
53, 100
               

               
Conread position:
               
58-398
               

               
Cow position:
               
chr17:18109382-18109031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
63, 102
               

               
Conread position:
               
58-414
               

               
Cow position:
               
chr17:3471118-3471488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 109
               

               
Conread position:
               
59-314
               

               
Cow position:
               
chr17:40312430-40312689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
60-339
               

               
Cow position:
               
chr17:5224109-5224387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
71, 100
               

               
Conread position:
               
60-400
               

               
Cow position:
               
chr17:15664375-15664732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 106
               

               
Conread position:
               
60-408
               

               
Cow position:
               
chr17:38614666-38615021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 57
               

               
Conread position:
               
60-414
               

               
Cow position:
               
chr17:24973656-24974010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
62, 100
               

               
Conread position:
               
61-397
               

               
Cow position:
               
chr17:33291090-33290766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
145, 60
               

               
Conread position:
               
61-399
               

               
Cow position:
               
chr17:13244313-13243991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
63-325
               

               
Cow position:
               
chr17:12216362-12216100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
78, 36
               

               
Conread position:
               
63-395
               

               
Cow position:
               
chr17:21313106-21312759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 167
               

               
Conread position:
               
68-332
               

               
Cow position:
               
chr17:16448048-16448319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
53, 91
               

               
Conread position:
               
68-408
               

               
Cow position:
               
chr17:18720730-18720384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 45
               

               
Conread position:
               
73-312
               

               
Cow position:
               
chr17:12054438-12054682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
5, 88
               

               
Conread position:
               
77-399
               

               
Cow position:
               
chr17:21620437-21620767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
44, 89
               

               
Conread position:
               
77-412
               

               
Cow position:
               
chr17:8544031-8544371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
41, 85
               

               
Conread position:
               
77-415
               

               
Cow position:
               
chr17:18472910-18473234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
44, 22
               

               
Conread position:
               
78-359
               

               
Cow position:
               
chr17:22032959-22032679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
80-373
               

               
Cow position:
               
chr17:7760744-7760446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
44, 93
               

               
Conread position:
               
82-333
               

               
Cow position:
               
chr17:17950971-17951223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
39, 87
               

               
Conread position:
               
82-346
               

               
Cow position:
               
chr17:7041209-7040949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
60, 38
               

               
Conread position:
               
82-406
               

               
Cow position:
               
chr17:11278294-11277967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
138, 39
               

               
Conread position:
               
82-408
               

               
Cow position:
               
chr17:20126349-20126664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 78
               

               
Conread position:
               
83-218
               

               
Cow position:
               
chr17:6997819-6997955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
85-363
               

               
Cow position:
               
chr17:11296369-11296653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
88-414
               

               
Cow position:
               
chr17:3503312-3503650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
33, 140
               

               
Conread position:
               
89-402
               

               
Cow position:
               
chr17:42347486-42347167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
93-318
               

               
Cow position:
               
chr17:26818713-26818483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
93-414
               

               
Cow position:
               
chr17:21115206-21114885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
44, 64
               

               
Conread position:
               
101-366
               

               
Cow position:
               
chr17:21004084-21003812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
103-330
               

               
Cow position:
               
chr17:24876886-24877121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
7, 58
               

               
Conread position:
               
103-399
               

               
Cow position:
               
chr17:17059189-17059478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
103-414
               

               
Cow position:
               
chr17:37163780-37163462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
104-400
               

               
Cow position:
               
chr17:21031538-21031842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
107-385
               

               
Cow position:
               
chr17:20839803-20839526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
10, 51
               

               
Conread position:
               
109-370
               

               
Cow position:
               
chr17:18495752-18495496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
110-392
               

               
Cow position:
               
chr17:12108557-12108851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
112-333
               

               
Cow position:
               
chr17:29040705-29040484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
112-347
               

               
Cow position:
               
chr17:4721248-4721490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
30, 51
               

               
Conread position:
               
114-414
               

               
Cow position:
               
chr17:38646834-38647130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
115-365
               

               
Cow position:
               
chr17:29363597-29363358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
232, 20
               

               
Conread position:
               
115-399
               

               
Cow position:
               
chr17:16371014-16371310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
120-324
               

               
Cow position:
               
chr17:3258265-3258468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 46
               

               
Conread position:
               
121-333
               

               
Cow position:
               
chr17:27142524-27142741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
121-370
               

               
Cow position:
               
chr17:15450127-15450377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
121-370
               

               
Cow position:
               
chr17:33999274-33999030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
122-399
               

               
Cow position:
               
chr17:14848751-14848487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 8
               

               
Conread position:
               
124-325
               

               
Cow position:
               
chr17:21017569-21017770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
94, 11
               

               
Conread position:
               
124-325
               

               
Cow position:
               
chr17:25078218-25078028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
187, 11
               

               
Conread position:
               
126-289
               

               
Cow position:
               
chr17:20055443-20055609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
126-399
               

               
Cow position:
               
chr17:38200991-38200710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
127-311
               

               
Cow position:
               
chr17:36533437-36533616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
127-408
               

               
Cow position:
               
chr17:17410074-17410356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
127-412
               

               
Cow position:
               
chr17:7697832-7698118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
127-413
               

               
Cow position:
               
chr17:21755663-21755364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
127-414
               

               
Cow position:
               
chr17:5423295-5423000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
130-352
               

               
Cow position:
               
chr17:20932116-20932333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 32
               

               
Conread position:
               
130-367
               

               
Cow position:
               
chr17:15132943-15133166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
130-399
               

               
Cow position:
               
chr17:32419339-32419062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
130-414
               

               
Cow position:
               
chr17:35126491-35126779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
133-413
               

               
Cow position:
               
chr17:24761443-24761160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
98, 16
               

               
Conread position:
               
134-399
               

               
Cow position:
               
chr17:21323084-21323330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
243, 21
               

               
Conread position:
               
135-303
               

               
Cow position:
               
chr17:12325961-12325796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
135-325
               

               
Cow position:
               
chr17:3182799-3182611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
135-333
               

               
Cow position:
               
chr17:32554238-32554043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
135-365
               

               
Cow position:
               
chr17:39012503-39012740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
135-371
               

               
Cow position:
               
chr17:22781477-22781710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
135-375
               

               
Cow position:
               
chr17:7132670-7132425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
135-391
               

               
Cow position:
               
chr17:33926336-33926082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr17:6423546-6423811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
82, 26
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr17:25097248-25097509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
82, 21
               

               
Conread position:
               
135-398
               

               
Cow position:
               
chr17:24787236-24786970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
135-399
               

               
Cow position:
               
chr17:6624044-6624310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
82, 8
               

               
Conread position:
               
135-399
               

               
Cow position:
               
chr17:11156708-11156439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
84, 21
               

               
Conread position:
               
135-399
               

               
Cow position:
               
chr17:24587403-24587678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
85, 27
               

               
Conread position:
               
135-400
               

               
Cow position:
               
chr17:27047948-27048211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
198, 21
               

               
Conread position:
               
135-408
               

               
Cow position:
               
chr17:15684290-15684572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
135-408
               

               
Cow position:
               
chr17:21739099-21738811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
135-411
               

               
Cow position:
               
chr17:9778036-9778309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 21
               

               
Conread position:
               
135-413
               

               
Cow position:
               
chr17:41290232-41289954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
137-413
               

               
Cow position:
               
chr17:11361970-11362253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
78, 19
               

               
Conread position:
               
138-385
               

               
Cow position:
               
chr17:966951-966706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
80, 18
               

               
Conread position:
               
139-399
               

               
Cow position:
               
chr17:27765070-27765327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
192, 17
               

               
Conread position:
               
140-362
               

               
Cow position:
               
chr17:5745453-5745241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
140-362
               

               
Cow position:
               
chr17:7890389-7890160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
140-399
               

               
Cow position:
               
chr17:4225701-4225445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
140-399
               

               
Cow position:
               
chr17:40741437-40741702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
91, 22
               

               
Conread position:
               
140-412
               

               
Cow position:
               
chr17:15333920-15333643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
140-414
               

               
Cow position:
               
chr17:20835383-20835650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
78, 22
               

               
Conread position:
               
141-316
               

               
Cow position:
               
chr17:30999567-30999735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
141-333
               

               
Cow position:
               
chr17:21710296-21710486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
141-399
               

               
Cow position:
               
chr17:32279116-32278854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
141-414
               

               
Cow position:
               
chr17:30713144-30713414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
66, 15
               

               
Conread position:
               
143-270
               

               
Cow position:
               
chr17:10432402-10432277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-397
               

               
Cow position:
               
chr17:33052656-33052898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
231, 13
               

               
Conread position:
               
144-392
               

               
Cow position:
               
chr17:27429372-27429626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
144-397
               

               
Cow position:
               
chr17:20912692-20912940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
85, 12
               

               
Conread position:
               
144-400
               

               
Cow position:
               
chr17:1035810-1035542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
144-400
               

               
Cow position:
               
chr17:21243992-21243732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
145-398
               

               
Cow position:
               
chr17:21628277-21628532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
188, 11
               

               
Conread position:
               
148-407
               

               
Cow position:
               
chr17:21207339-21207079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
69, 133
               

               
Conread position:
               
152-408
               

               
Cow position:
               
chr17:24821670-24821925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
153-386
               

               
Cow position:
               
chr17:4436431-4436198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
8, 112
               

               
Conread position:
               
153-396
               

               
Cow position:
               
chr17:32950073-32950326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 29
               

               
Conread position:
               
154-392
               

               
Cow position:
               
chr17:35311223-35311474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
52, 155
               

               
Conread position:
               
154-400
               

               
Cow position:
               
chr17:21697534-21697786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
63, 128
               

               
Conread position:
               
155-399
               

               
Cow position:
               
chr17:10459132-10458882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
80, 23
               

               
Conread position:
               
156-397
               

               
Cow position:
               
chr17:37482275-37482017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
64, 128
               

               
Conread position:
               
156-413
               

               
Cow position:
               
chr17:25999920-26000189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
64, 94
               

               
Conread position:
               
157-407
               

               
Cow position:
               
chr17:9911568-9911822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 118
               

               
Conread position:
               
157-412
               

               
Cow position:
               
chr17:5514564-5514827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 119
               

               
Conread position:
               
157-413
               

               
Cow position:
               
chr17:7648025-7648280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
161, 61
               

               
Conread position:
               
157-414
               

               
Cow position:
               
chr17:12447593-12447332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
63, 24
               

               
Conread position:
               
158-330
               

               
Cow position:
               
chr17:21412441-21412267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
158-333
               

               
Cow position:
               
chr17:24490327-24490509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
61, 135
               

               
Conread position:
               
158-400
               

               
Cow position:
               
chr17:26224323-26224566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 124
               

               
Conread position:
               
158-408
               

               
Cow position:
               
chr17:31231308-31231053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
53, 122
               

               
Conread position:
               
158-416
               

               
Cow position:
               
chr17:21434923-21434656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
159-333
               

               
Cow position:
               
chr17:37857927-37857742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 138
               

               
Conread position:
               
159-397
               

               
Cow position:
               
chr17:37480186-37479943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
74, 129
               

               
Conread position:
               
160-399
               

               
Cow position:
               
chr17:9746326-9746570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
58, 91
               

               
Conread position:
               
162-414
               

               
Cow position:
               
chr17:12536658-12536396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
58, 114
               

               
Conread position:
               
163-400
               

               
Cow position:
               
chr17:34208009-34207760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 117
               

               
Conread position:
               
164-413
               

               
Cow position:
               
chr17:908558-908808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
50, 106
               

               
Conread position:
               
168-333
               

               
Cow position:
               
chr17:8837133-8836968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 110
               

               
Conread position:
               
170-333
               

               
Cow position:
               
chr17:36203672-36203508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 81
               

               
Conread position:
               
175-414
               

               
Cow position:
               
chr17:24149000-24149253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 118
               

               
Conread position:
               
177-399
               

               
Cow position:
               
chr17:12590988-12591223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
43, 105
               

               
Conread position:
               
181-333
               

               
Cow position:
               
chr17:21918045-21917892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
40, 105
               

               
Conread position:
               
184-400
               

               
Cow position:
               
chr17:30734447-30734239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
149, 34
               

               
Conread position:
               
190-408
               

               
Cow position:
               
chr17:7142702-7142924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 101
               

               
Conread position:
               
191-399
               

               
Cow position:
               
chr17:1353235-1353451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
30, 55
               

               
Conread position:
               
193-408
               

               
Cow position:
               
chr17:28467977-28468191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 84
               

               
Conread position:
               
194-369
               

               
Cow position:
               
chr17:40792065-40792238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
24, 82
               

               
Conread position:
               
194-413
               

               
Cow position:
               
chr17:14762277-14762054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
23, 89
               

               
Conread position:
               
195-414
               

               
Cow position:
               
chr17:18146025-18146254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 84
               

               
Conread position:
               
198-413
               

               
Cow position:
               
chr17:24559145-24559358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
134, 22
               

               
Conread position:
               
200-408
               

               
Cow position:
               
chr17:267736-267522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
204-413
               

               
Cow position:
               
chr17:20874247-20874464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
129, 27
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chr17:14060908-14060706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
113, 66
               

               
Conread position:
               
218-408
               

               
Cow position:
               
chr17:1113755-1113951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
218-413
               

               
Cow position:
               
chr17:6328982-6329183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
116, 56
               

               
Conread position:
               
218-414
               

               
Cow position:
               
chr17:40673256-40673439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
159, 53
               

               
Conread position:
               
219-408
               

               
Cow position:
               
chr17:33411151-33410954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
113, 66
               

               
Conread position:
               
226-408
               

               
Cow position:
               
chr17:20884401-20884586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
107, 47
               

               
Conread position:
               
230-413
               

               
Cow position:
               
chr17:32348956-32349139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
124, 44
               

               
Conread position:
               
243-399
               

               
Cow position:
               
chr17:11832224-11832061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
84, 31
               
Show alignments to all cow chromosomes.